EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000008519 (Gene tree)
Gene ID: 109513736
Gene Symbol: sall4
Alias: cb372|cb614|ik:tdsubc_2c1|sb:cb372|sb:cb614|wu:fa01g03|xx:tdsubc_2c1
Full Name: spalt like transcription factor 4
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 6759 bases
Position: chrKV879697.1:348457-355215
Accession: 109513736
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000006683	zf-C2H2	PF00096.26	4.8e-29	1	6
ENSHCOP00000006683	zf-C2H2	PF00096.26	4.8e-29	2	6
ENSHCOP00000006683	zf-C2H2	PF00096.26	4.8e-29	3	6
ENSHCOP00000006683	zf-C2H2	PF00096.26	4.8e-29	4	6
ENSHCOP00000006683	zf-C2H2	PF00096.26	4.8e-29	5	6
ENSHCOP00000006683	zf-C2H2	PF00096.26	4.8e-29	6	6
ENSHCOP00000006683	zf-met	PF12874.7	1.2e-15	1	2
ENSHCOP00000006683	zf-met	PF12874.7	1.2e-15	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000003266	-	4702	XM_019866364	ENSHCOP00000006683	1076 (aa)	XP_019721923	UPI00094E4E53

Gene Model

Click here to download ENSHCOG00000008519's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000008519's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000008519	sall4	91	65.385	ENSHCOG00000010423	sall3a	99	43.146
ENSHCOG00000008519	sall4	56	38.272	ENSHCOG00000012131	prdm5	62	40.323
ENSHCOG00000008519	sall4	91	67.308	ENSHCOG00000004745	sall3b	82	67.308
ENSHCOG00000008519	sall4	100	65.385	ENSHCOG00000000974	sall1a	70	65.385

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000008519	sall4	100	43.646	ENSG00000101115	SALL4	100	59.615	Homo_sapiens
ENSHCOG00000008519	sall4	100	77.982	ENSAPOG00000002465	sall4	100	77.982	Acanthochromis_polyacanthus
ENSHCOG00000008519	sall4	100	44.190	ENSAMEG00000013250	-	99	45.632	Ailuropoda_melanoleuca
ENSHCOG00000008519	sall4	100	76.422	ENSACIG00000017298	sall4	100	76.422	Amphilophus_citrinellus
ENSHCOG00000008519	sall4	100	78.257	ENSAOCG00000023678	sall4	100	78.257	Amphiprion_ocellaris
ENSHCOG00000008519	sall4	100	78.716	ENSAPEG00000000751	sall4	100	78.716	Amphiprion_percula
ENSHCOG00000008519	sall4	100	77.819	ENSATEG00000024480	sall4	100	77.819	Anabas_testudineus
ENSHCOG00000008519	sall4	100	50.354	ENSAPLG00000006498	SALL4	100	50.794	Anas_platyrhynchos
ENSHCOG00000008519	sall4	100	50.562	ENSACAG00000012748	SALL4	100	51.340	Anolis_carolinensis
ENSHCOG00000008519	sall4	100	44.000	ENSANAG00000023352	SALL4	91	67.308	Aotus_nancymaae
ENSHCOG00000008519	sall4	100	75.710	ENSACLG00000017851	sall4	100	75.710	Astatotilapia_calliptera
ENSHCOG00000008519	sall4	99	62.489	ENSAMXG00000001254	sall4	99	63.662	Astyanax_mexicanus
ENSHCOG00000008519	sall4	100	41.718	ENSBTAG00000003101	SALL4	100	42.032	Bos_taurus
ENSHCOG00000008519	sall4	81	45.787	ENSCJAG00000000591	SALL4	96	45.657	Callithrix_jacchus
ENSHCOG00000008519	sall4	100	43.695	ENSCAFG00000011738	-	100	43.783	Canis_familiaris
ENSHCOG00000008519	sall4	100	43.695	ENSCAFG00020021870	SALL4	100	43.783	Canis_lupus_dingo
ENSHCOG00000008519	sall4	100	41.848	ENSCHIG00000026270	SALL4	100	42.023	Capra_hircus
ENSHCOG00000008519	sall4	100	42.670	ENSTSYG00000007359	SALL4	100	57.692	Carlito_syrichta
ENSHCOG00000008519	sall4	99	41.652	ENSCAPG00000012135	SALL4	95	42.222	Cavia_aperea
ENSHCOG00000008519	sall4	100	39.965	ENSCCAG00000029512	-	100	58.824	Cebus_capucinus
ENSHCOG00000008519	sall4	100	43.581	ENSCATG00000030757	SALL4	91	67.308	Cercocebus_atys
ENSHCOG00000008519	sall4	100	42.770	ENSCLAG00000010479	SALL4	91	65.385	Chinchilla_lanigera
ENSHCOG00000008519	sall4	100	43.572	ENSCSAG00000015269	SALL4	100	43.486	Chlorocebus_sabaeus
ENSHCOG00000008519	sall4	99	51.644	ENSCPBG00000014995	SALL4	99	51.865	Chrysemys_picta_bellii
ENSHCOG00000008519	sall4	100	43.264	ENSCANG00000036463	SALL4	100	43.178	Colobus_angolensis_palliatus
ENSHCOG00000008519	sall4	61	56.863	ENSCGRG00001019569	Sall4	100	55.769	Cricetulus_griseus_chok1gshd
ENSHCOG00000008519	sall4	100	40.770	ENSCGRG00000000462	Sall4	100	77.778	Cricetulus_griseus_crigri
ENSHCOG00000008519	sall4	100	76.073	ENSCSEG00000014604	sall4	100	76.164	Cynoglossus_semilaevis
ENSHCOG00000008519	sall4	100	74.152	ENSCVAG00000010815	sall4	100	74.335	Cyprinodon_variegatus
ENSHCOG00000008519	sall4	99	62.387	ENSDARG00000044485	sall4	99	62.658	Danio_rerio
ENSHCOG00000008519	sall4	100	43.293	ENSDNOG00000040633	SALL4	100	43.603	Dasypus_novemcinctus
ENSHCOG00000008519	sall4	100	40.672	ENSDORG00000012841	Sall4	100	75.676	Dipodomys_ordii
ENSHCOG00000008519	sall4	75	46.429	ENSETEG00000012475	-	64	46.429	Echinops_telfairi
ENSHCOG00000008519	sall4	100	45.195	ENSECAG00000018533	SALL4	100	45.130	Equus_caballus
ENSHCOG00000008519	sall4	100	43.316	ENSEEUG00000003649	SALL4	99	42.358	Erinaceus_europaeus
ENSHCOG00000008519	sall4	100	63.186	ENSELUG00000005696	sall4	100	63.186	Esox_lucius
ENSHCOG00000008519	sall4	100	43.512	ENSFCAG00000002822	SALL4	88	67.308	Felis_catus
ENSHCOG00000008519	sall4	100	49.204	ENSFALG00000013149	SALL4	100	50.044	Ficedula_albicollis
ENSHCOG00000008519	sall4	100	41.981	ENSFDAG00000017812	SALL4	91	63.462	Fukomys_damarensis
ENSHCOG00000008519	sall4	100	73.010	ENSFHEG00000014187	sall4	100	72.919	Fundulus_heteroclitus
ENSHCOG00000008519	sall4	100	67.366	ENSGMOG00000003822	sall4	100	67.457	Gadus_morhua
ENSHCOG00000008519	sall4	100	51.884	ENSGALG00000041365	SALL4	100	52.255	Gallus_gallus
ENSHCOG00000008519	sall4	100	75.092	ENSGAFG00000019925	sall4	100	75.275	Gambusia_affinis
ENSHCOG00000008519	sall4	100	72.354	ENSGACG00000011124	sall4	100	72.901	Gasterosteus_aculeatus
ENSHCOG00000008519	sall4	99	51.550	ENSGAGG00000002297	SALL4	99	51.550	Gopherus_agassizii
ENSHCOG00000008519	sall4	100	43.558	ENSGGOG00000001832	SALL4	91	67.308	Gorilla_gorilla
ENSHCOG00000008519	sall4	100	75.710	ENSHBUG00000007327	sall4	100	75.710	Haplochromis_burtoni
ENSHCOG00000008519	sall4	97	42.989	ENSHGLG00000009043	SALL4	95	42.620	Heterocephalus_glaber_female
ENSHCOG00000008519	sall4	97	42.989	ENSHGLG00100002722	SALL4	95	42.620	Heterocephalus_glaber_male
ENSHCOG00000008519	sall4	99	63.521	ENSIPUG00000019170	sall4	99	63.373	Ictalurus_punctatus
ENSHCOG00000008519	sall4	64	59.615	ENSSTOG00000025002	SALL4	100	83.099	Ictidomys_tridecemlineatus
ENSHCOG00000008519	sall4	100	42.969	ENSJJAG00000020688	Sall4	99	84.507	Jaculus_jaculus
ENSHCOG00000008519	sall4	100	75.138	ENSKMAG00000002501	sall4	100	75.688	Kryptolebias_marmoratus
ENSHCOG00000008519	sall4	100	77.127	ENSLBEG00000019951	sall4	100	77.127	Labrus_bergylta
ENSHCOG00000008519	sall4	96	47.378	ENSLACG00000013898	SALL4	99	57.068	Latimeria_chalumnae
ENSHCOG00000008519	sall4	100	61.156	ENSLOCG00000002427	sall4	100	61.151	Lepisosteus_oculatus
ENSHCOG00000008519	sall4	100	44.035	ENSLAFG00000004309	SALL4	100	44.102	Loxodonta_africana
ENSHCOG00000008519	sall4	100	43.581	ENSMFAG00000027169	SALL4	100	43.493	Macaca_fascicularis
ENSHCOG00000008519	sall4	91	43.907	ENSMMUG00000003870	SALL4	100	59.615	Macaca_mulatta
ENSHCOG00000008519	sall4	91	43.907	ENSMNEG00000035995	SALL4	91	67.308	Macaca_nemestrina
ENSHCOG00000008519	sall4	100	43.668	ENSMLEG00000030467	SALL4	100	43.581	Mandrillus_leucophaeus
ENSHCOG00000008519	sall4	100	76.839	ENSMAMG00000005223	sall4	100	77.203	Mastacembelus_armatus
ENSHCOG00000008519	sall4	100	75.619	ENSMZEG00005023418	sall4	100	75.619	Maylandia_zebra
ENSHCOG00000008519	sall4	75	63.462	ENSMGAG00000009344	SALL4	100	63.462	Meleagris_gallopavo
ENSHCOG00000008519	sall4	100	41.430	ENSMAUG00000015814	Sall4	100	74.699	Mesocricetus_auratus
ENSHCOG00000008519	sall4	100	43.619	ENSMICG00000000027	SALL4	86	67.308	Microcebus_murinus
ENSHCOG00000008519	sall4	100	41.986	ENSMOCG00000018245	Sall4	100	82.192	Microtus_ochrogaster
ENSHCOG00000008519	sall4	100	77.093	ENSMMOG00000014929	sall4	100	77.185	Mola_mola
ENSHCOG00000008519	sall4	99	46.435	ENSMODG00000016387	SALL4	97	45.927	Monodelphis_domestica
ENSHCOG00000008519	sall4	100	78.571	ENSMALG00000018709	sall4	100	78.877	Monopterus_albus
ENSHCOG00000008519	sall4	100	41.688	MGP_CAROLIEiJ_G0024723	Sall4	100	84.722	Mus_caroli
ENSHCOG00000008519	sall4	100	42.046	ENSMUSG00000027547	Sall4	100	84.722	Mus_musculus
ENSHCOG00000008519	sall4	100	41.010	MGP_PahariEiJ_G0026164	Sall4	100	84.722	Mus_pahari
ENSHCOG00000008519	sall4	100	42.046	MGP_SPRETEiJ_G0025643	Sall4	100	84.722	Mus_spretus
ENSHCOG00000008519	sall4	100	43.168	ENSMPUG00000017543	SALL4	96	42.882	Mustela_putorius_furo
ENSHCOG00000008519	sall4	97	44.597	ENSMLUG00000007060	-	98	44.312	Myotis_lucifugus
ENSHCOG00000008519	sall4	99	34.712	ENSMLUG00000028073	-	99	34.477	Myotis_lucifugus
ENSHCOG00000008519	sall4	100	41.314	ENSMLUG00000008405	-	100	41.044	Myotis_lucifugus
ENSHCOG00000008519	sall4	100	42.695	ENSNGAG00000017833	Sall4	94	67.308	Nannospalax_galili
ENSHCOG00000008519	sall4	100	76.330	ENSNBRG00000001829	sall4	100	76.330	Neolamprologus_brichardi
ENSHCOG00000008519	sall4	100	43.543	ENSNLEG00000007013	SALL4	100	43.471	Nomascus_leucogenys
ENSHCOG00000008519	sall4	84	63.462	ENSMEUG00000005793	-	99	63.462	Notamacropus_eugenii
ENSHCOG00000008519	sall4	100	43.342	ENSOPRG00000011640	SALL4	100	42.944	Ochotona_princeps
ENSHCOG00000008519	sall4	100	76.535	ENSONIG00000016557	sall4	100	76.810	Oreochromis_niloticus
ENSHCOG00000008519	sall4	100	51.370	ENSOANG00000008667	SALL4	97	51.507	Ornithorhynchus_anatinus
ENSHCOG00000008519	sall4	97	44.590	ENSOCUG00000011797	SALL4	98	44.496	Oryctolagus_cuniculus
ENSHCOG00000008519	sall4	100	72.544	ENSORLG00000016130	sall4	100	73.095	Oryzias_latipes
ENSHCOG00000008519	sall4	100	72.635	ENSORLG00020007339	sall4	100	73.186	Oryzias_latipes_hni
ENSHCOG00000008519	sall4	100	72.268	ENSORLG00015002265	sall4	100	72.819	Oryzias_latipes_hsok
ENSHCOG00000008519	sall4	100	73.737	ENSOMEG00000017344	sall4	100	74.288	Oryzias_melastigma
ENSHCOG00000008519	sall4	97	44.311	ENSOGAG00000013799	SALL4	99	44.311	Otolemur_garnettii
ENSHCOG00000008519	sall4	100	39.894	ENSOARG00000014570	SALL4	100	39.876	Ovis_aries
ENSHCOG00000008519	sall4	100	43.646	ENSPPAG00000038064	SALL4	91	67.308	Pan_paniscus
ENSHCOG00000008519	sall4	100	42.857	ENSPPRG00000008677	SALL4	88	67.308	Panthera_pardus
ENSHCOG00000008519	sall4	100	43.646	ENSPTRG00000013631	SALL4	91	67.308	Pan_troglodytes
ENSHCOG00000008519	sall4	91	43.907	ENSPANG00000021792	SALL4	91	67.308	Papio_anubis
ENSHCOG00000008519	sall4	100	61.866	ENSPKIG00000007074	sall4	100	62.035	Paramormyrops_kingsleyae
ENSHCOG00000008519	sall4	99	50.791	ENSPSIG00000009066	SALL4	99	51.097	Pelodiscus_sinensis
ENSHCOG00000008519	sall4	100	66.390	ENSPMGG00000022551	sall4	100	66.297	Periophthalmus_magnuspinnatus
ENSHCOG00000008519	sall4	100	41.529	ENSPEMG00000022706	Sall4	100	84.722	Peromyscus_maniculatus_bairdii
ENSHCOG00000008519	sall4	99	47.502	ENSPCIG00000022838	SALL4	97	47.586	Phascolarctos_cinereus
ENSHCOG00000008519	sall4	100	74.542	ENSPFOG00000001442	sall4	100	74.267	Poecilia_formosa
ENSHCOG00000008519	sall4	100	74.451	ENSPLAG00000008760	sall4	100	74.176	Poecilia_latipinna
ENSHCOG00000008519	sall4	100	74.725	ENSPMEG00000008497	sall4	100	74.451	Poecilia_mexicana
ENSHCOG00000008519	sall4	100	74.451	ENSPREG00000021140	sall4	100	74.359	Poecilia_reticulata
ENSHCOG00000008519	sall4	100	43.543	ENSPPYG00000011138	SALL4	100	43.558	Pongo_abelii
ENSHCOG00000008519	sall4	100	41.521	ENSPCAG00000004726	SALL4	99	42.040	Procavia_capensis
ENSHCOG00000008519	sall4	100	43.307	ENSPCOG00000016321	SALL4	91	59.615	Propithecus_coquereli
ENSHCOG00000008519	sall4	94	43.018	ENSPVAG00000002075	SALL4	94	42.991	Pteropus_vampyrus
ENSHCOG00000008519	sall4	100	75.596	ENSPNYG00000021738	sall4	100	75.596	Pundamilia_nyererei
ENSHCOG00000008519	sall4	99	65.036	ENSPNAG00000020929	sall4	99	64.493	Pygocentrus_nattereri
ENSHCOG00000008519	sall4	100	41.804	ENSRNOG00000050035	Sall4	87	55.769	Rattus_norvegicus
ENSHCOG00000008519	sall4	100	43.572	ENSRBIG00000039876	SALL4	100	43.486	Rhinopithecus_bieti
ENSHCOG00000008519	sall4	100	43.572	ENSRROG00000036585	SALL4	100	43.486	Rhinopithecus_roxellana
ENSHCOG00000008519	sall4	100	43.805	ENSSBOG00000030011	SALL4	85	67.308	Saimiri_boliviensis_boliviensis
ENSHCOG00000008519	sall4	96	65.385	ENSSHAG00000018013	SALL4	89	65.385	Sarcophilus_harrisii
ENSHCOG00000008519	sall4	100	61.217	ENSSFOG00015021075	sall4	100	61.490	Scleropages_formosus
ENSHCOG00000008519	sall4	100	78.134	ENSSMAG00000019218	sall4	99	78.134	Scophthalmus_maximus
ENSHCOG00000008519	sall4	100	80.037	ENSSDUG00000004657	sall4	100	80.037	Seriola_dumerili
ENSHCOG00000008519	sall4	100	80.037	ENSSLDG00000004973	sall4	100	80.037	Seriola_lalandi_dorsalis
ENSHCOG00000008519	sall4	100	78.991	ENSSPAG00000001978	sall4	100	78.991	Stegastes_partitus
ENSHCOG00000008519	sall4	100	43.094	ENSSSCG00000007479	SALL4	100	42.695	Sus_scrofa
ENSHCOG00000008519	sall4	100	74.128	ENSTRUG00000007410	sall4	100	74.404	Takifugu_rubripes
ENSHCOG00000008519	sall4	100	72.886	ENSTNIG00000012460	sall4	100	73.254	Tetraodon_nigroviridis
ENSHCOG00000008519	sall4	98	42.216	ENSTTRG00000007753	SALL4	99	42.125	Tursiops_truncatus
ENSHCOG00000008519	sall4	100	43.574	ENSUAMG00000010113	SALL4	100	43.662	Ursus_americanus
ENSHCOG00000008519	sall4	97	43.808	ENSUMAG00000024274	SALL4	97	43.808	Ursus_maritimus
ENSHCOG00000008519	sall4	100	48.670	ENSXETG00000012326	sall4	100	48.356	Xenopus_tropicalis
ENSHCOG00000008519	sall4	100	67.798	ENSXCOG00000015467	sall4	100	68.015	Xiphophorus_couchianus
ENSHCOG00000008519	sall4	100	67.677	ENSXMAG00000012692	sall4	100	67.769	Xiphophorus_maculatus