EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000008574 (Gene tree)
Gene ID: 109518238
Gene Symbol: si:ch1073-296i8.2
Alias: -
Full Name: uncharacterized LOC109518238
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 1584 bases
Position: chrKV880028.1:596806-598389
Accession: 109518238
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000006735	RNase_T	PF00929.24	1.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000003179	-	1010	XM_019873969	ENSHCOP00000006735	237 (aa)	XP_019729528	UPI00094E369F

Gene Model

Click here to download ENSHCOG00000008574's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000008574's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000008574	si:ch1073-296i8.2	93	54.023	ENSAOCG00000011593	si:ch1073-296i8.2	93	54.023	Amphiprion_ocellaris
ENSHCOG00000008574	si:ch1073-296i8.2	93	53.817	ENSAPEG00000012492	si:ch1073-296i8.2	93	53.817	Amphiprion_percula
ENSHCOG00000008574	si:ch1073-296i8.2	79	44.737	ENSATEG00000021542	si:ch1073-385f13.3	96	44.737	Anabas_testudineus
ENSHCOG00000008574	si:ch1073-296i8.2	99	60.338	ENSATEG00000021547	si:ch1073-296i8.2	93	60.338	Anabas_testudineus
ENSHCOG00000008574	si:ch1073-296i8.2	80	41.667	ENSACLG00000023991	-	56	41.667	Astatotilapia_calliptera
ENSHCOG00000008574	si:ch1073-296i8.2	79	43.386	ENSCVAG00000001533	-	95	43.386	Cyprinodon_variegatus
ENSHCOG00000008574	si:ch1073-296i8.2	86	55.122	ENSDARG00000093773	si:ch1073-296i8.2	87	55.122	Danio_rerio
ENSHCOG00000008574	si:ch1073-296i8.2	81	44.330	ENSDARG00000092584	si:ch1073-385f13.3	79	44.330	Danio_rerio
ENSHCOG00000008574	si:ch1073-296i8.2	80	41.146	ENSFHEG00000018181	-	96	41.146	Fundulus_heteroclitus
ENSHCOG00000008574	si:ch1073-296i8.2	98	59.402	ENSFHEG00000018188	si:ch1073-296i8.2	92	59.402	Fundulus_heteroclitus
ENSHCOG00000008574	si:ch1073-296i8.2	73	66.667	ENSGMOG00000019335	si:ch1073-296i8.2	98	66.667	Gadus_morhua
ENSHCOG00000008574	si:ch1073-296i8.2	77	43.784	ENSGMOG00000019565	-	97	43.784	Gadus_morhua
ENSHCOG00000008574	si:ch1073-296i8.2	76	69.274	ENSGACG00000007185	si:ch1073-296i8.2	99	69.274	Gasterosteus_aculeatus
ENSHCOG00000008574	si:ch1073-296i8.2	78	44.086	ENSHBUG00000007541	si:ch1073-385f13.3	94	44.086	Haplochromis_burtoni
ENSHCOG00000008574	si:ch1073-296i8.2	84	64.141	ENSKMAG00000015660	si:ch1073-296i8.2	88	64.141	Kryptolebias_marmoratus
ENSHCOG00000008574	si:ch1073-296i8.2	76	44.809	ENSKMAG00000015669	-	92	44.809	Kryptolebias_marmoratus
ENSHCOG00000008574	si:ch1073-296i8.2	88	53.738	ENSLBEG00000019623	si:ch1073-296i8.2	82	53.738	Labrus_bergylta
ENSHCOG00000008574	si:ch1073-296i8.2	83	47.208	ENSLOCG00000014933	-	99	47.208	Lepisosteus_oculatus
ENSHCOG00000008574	si:ch1073-296i8.2	76	46.703	ENSMAMG00000023075	si:ch1073-385f13.3	93	46.703	Mastacembelus_armatus
ENSHCOG00000008574	si:ch1073-296i8.2	62	64.626	ENSMMOG00000018979	si:ch1073-296i8.2	69	64.626	Mola_mola
ENSHCOG00000008574	si:ch1073-296i8.2	80	42.188	ENSMALG00000015952	si:ch1073-385f13.3	97	42.188	Monopterus_albus
ENSHCOG00000008574	si:ch1073-296i8.2	78	43.548	ENSONIG00000012794	si:ch1073-385f13.3	94	43.548	Oreochromis_niloticus
ENSHCOG00000008574	si:ch1073-296i8.2	84	59.799	ENSORLG00000023958	si:ch1073-296i8.2	90	59.799	Oryzias_latipes
ENSHCOG00000008574	si:ch1073-296i8.2	80	43.979	ENSORLG00000030645	si:ch1073-385f13.3	86	43.979	Oryzias_latipes
ENSHCOG00000008574	si:ch1073-296i8.2	79	43.158	ENSORLG00020021903	-	96	43.158	Oryzias_latipes_hni
ENSHCOG00000008574	si:ch1073-296i8.2	84	59.799	ENSORLG00020021912	si:ch1073-296i8.2	90	59.799	Oryzias_latipes_hni
ENSHCOG00000008574	si:ch1073-296i8.2	84	59.204	ENSORLG00015015303	si:ch1073-296i8.2	92	59.204	Oryzias_latipes_hsok
ENSHCOG00000008574	si:ch1073-296i8.2	83	41.117	ENSPKIG00000023552	-	92	41.117	Paramormyrops_kingsleyae
ENSHCOG00000008574	si:ch1073-296i8.2	73	46.023	ENSPFOG00000021742	-	92	46.023	Poecilia_formosa
ENSHCOG00000008574	si:ch1073-296i8.2	79	38.947	ENSPFOG00000005521	si:ch1073-385f13.3	96	38.947	Poecilia_formosa
ENSHCOG00000008574	si:ch1073-296i8.2	73	46.023	ENSPMEG00000013087	si:ch1073-385f13.3	91	46.023	Poecilia_mexicana
ENSHCOG00000008574	si:ch1073-296i8.2	79	39.474	ENSPMEG00000013096	si:ch1073-385f13.3	95	39.474	Poecilia_mexicana
ENSHCOG00000008574	si:ch1073-296i8.2	77	38.679	ENSPREG00000013537	-	80	38.679	Poecilia_reticulata
ENSHCOG00000008574	si:ch1073-296i8.2	78	48.108	ENSPNAG00000018956	si:ch1073-385f13.3	98	48.108	Pygocentrus_nattereri
ENSHCOG00000008574	si:ch1073-296i8.2	85	67.327	ENSSMAG00000004874	si:ch1073-296i8.2	78	67.327	Scophthalmus_maximus
ENSHCOG00000008574	si:ch1073-296i8.2	82	44.898	ENSSLDG00000002379	si:ch1073-385f13.3	98	44.898	Seriola_lalandi_dorsalis
ENSHCOG00000008574	si:ch1073-296i8.2	81	65.625	ENSSPAG00000012797	si:ch1073-296i8.2	98	65.625	Stegastes_partitus
ENSHCOG00000008574	si:ch1073-296i8.2	82	59.794	ENSTNIG00000010399	si:ch1073-296i8.2	85	59.794	Tetraodon_nigroviridis
ENSHCOG00000008574	si:ch1073-296i8.2	79	40.000	ENSXMAG00000021869	si:ch1073-385f13.3	95	40.000	Xiphophorus_maculatus