EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000008590 (Gene tree)
Gene ID: 109529725
Gene Symbol: gfi1ab
Alias: gfi1|gfi1.2|gfi1b
Full Name: zinc finger protein Gfi-1-like
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 4070 bases
Position: chrKV880382.1:562926-566995
Accession: 109529725
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000006746	zf-C2H2	PF00096.26	9.7e-27	1	6
ENSHCOP00000006746	zf-C2H2	PF00096.26	9.7e-27	2	6
ENSHCOP00000006746	zf-C2H2	PF00096.26	9.7e-27	3	6
ENSHCOP00000006746	zf-C2H2	PF00096.26	9.7e-27	4	6
ENSHCOP00000006746	zf-C2H2	PF00096.26	9.7e-27	5	6
ENSHCOP00000006746	zf-C2H2	PF00096.26	9.7e-27	6	6
ENSHCOP00000006746	zf-met	PF12874.7	1.6e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000003167	-	1173	XM_019893146	ENSHCOP00000006746	390 (aa)	XP_019748705	-

Gene Model

Click here to download ENSHCOG00000008590's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000008590's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000008590	gfi1ab	51	44.379	ENSHCOG00000015441	-	67	44.379
ENSHCOG00000008590	gfi1ab	51	41.549	ENSHCOG00000020924	-	66	41.549
ENSHCOG00000008590	gfi1ab	52	43.066	ENSHCOG00000001448	-	60	43.066
ENSHCOG00000008590	gfi1ab	51	53.333	ENSHCOG00000015355	-	88	47.748
ENSHCOG00000008590	gfi1ab	62	40.411	ENSHCOG00000007351	-	77	40.411
ENSHCOG00000008590	gfi1ab	50	33.184	ENSHCOG00000014796	-	65	36.145
ENSHCOG00000008590	gfi1ab	51	43.750	ENSHCOG00000020725	-	65	43.478
ENSHCOG00000008590	gfi1ab	51	41.958	ENSHCOG00000020856	-	79	41.781
ENSHCOG00000008590	gfi1ab	51	41.912	ENSHCOG00000014881	-	70	41.912
ENSHCOG00000008590	gfi1ab	56	34.884	ENSHCOG00000014887	-	61	33.775
ENSHCOG00000008590	gfi1ab	50	45.690	ENSHCOG00000014850	-	55	43.066
ENSHCOG00000008590	gfi1ab	55	45.963	ENSHCOG00000019512	-	89	45.963
ENSHCOG00000008590	gfi1ab	55	40.964	ENSHCOG00000001338	-	93	40.000
ENSHCOG00000008590	gfi1ab	56	45.161	ENSHCOG00000003041	-	92	45.161
ENSHCOG00000008590	gfi1ab	51	41.912	ENSHCOG00000006286	ZNF319	89	41.912
ENSHCOG00000008590	gfi1ab	51	44.048	ENSHCOG00000021033	-	77	44.048
ENSHCOG00000008590	gfi1ab	100	52.913	ENSHCOG00000019555	GFI1	100	54.612
ENSHCOG00000008590	gfi1ab	79	42.236	ENSHCOG00000015414	-	90	42.236
ENSHCOG00000008590	gfi1ab	73	42.857	ENSHCOG00000001942	-	98	45.517
ENSHCOG00000008590	gfi1ab	51	44.172	ENSHCOG00000001256	-	77	44.172
ENSHCOG00000008590	gfi1ab	69	45.833	ENSHCOG00000003085	-	90	40.667
ENSHCOG00000008590	gfi1ab	74	39.881	ENSHCOG00000014713	-	96	40.476
ENSHCOG00000008590	gfi1ab	51	48.810	ENSHCOG00000019481	-	80	45.399
ENSHCOG00000008590	gfi1ab	51	39.881	ENSHCOG00000000511	-	63	39.881
ENSHCOG00000008590	gfi1ab	51	40.351	ENSHCOG00000000517	-	74	40.351
ENSHCOG00000008590	gfi1ab	51	42.574	ENSHCOG00000016337	si:ch211-216l23.1	50	42.574
ENSHCOG00000008590	gfi1ab	55	41.463	ENSHCOG00000011432	-	90	39.286
ENSHCOG00000008590	gfi1ab	64	39.181	ENSHCOG00000001272	-	99	45.985
ENSHCOG00000008590	gfi1ab	51	42.262	ENSHCOG00000012617	-	80	42.262
ENSHCOG00000008590	gfi1ab	54	43.571	ENSHCOG00000019465	-	66	42.654
ENSHCOG00000008590	gfi1ab	51	41.429	ENSHCOG00000020848	-	64	41.429
ENSHCOG00000008590	gfi1ab	54	39.645	ENSHCOG00000020846	-	71	39.645

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000008590	gfi1ab	100	51.002	ENSG00000162676	GFI1	100	52.655	Homo_sapiens
ENSHCOG00000008590	gfi1ab	100	62.260	ENSAPOG00000015189	gfi1ab	100	62.260	Acanthochromis_polyacanthus
ENSHCOG00000008590	gfi1ab	100	63.524	ENSACIG00000016354	gfi1ab	100	63.524	Amphilophus_citrinellus
ENSHCOG00000008590	gfi1ab	100	54.703	ENSAOCG00000008339	gfi1ab	100	54.703	Amphiprion_ocellaris
ENSHCOG00000008590	gfi1ab	100	62.379	ENSAPEG00000023870	gfi1ab	100	62.379	Amphiprion_percula
ENSHCOG00000008590	gfi1ab	100	62.410	ENSATEG00000009167	gfi1ab	89	62.410	Anabas_testudineus
ENSHCOG00000008590	gfi1ab	87	56.906	ENSAPLG00000015700	GFI1	97	56.906	Anas_platyrhynchos
ENSHCOG00000008590	gfi1ab	100	53.630	ENSACAG00000004498	GFI1	100	55.035	Anolis_carolinensis
ENSHCOG00000008590	gfi1ab	100	51.327	ENSANAG00000019656	GFI1	100	52.655	Aotus_nancymaae
ENSHCOG00000008590	gfi1ab	100	63.462	ENSACLG00000026458	gfi1ab	93	63.462	Astatotilapia_calliptera
ENSHCOG00000008590	gfi1ab	100	53.077	ENSAMXG00000006669	GFI1	100	53.077	Astyanax_mexicanus
ENSHCOG00000008590	gfi1ab	100	57.317	ENSAMXG00000039600	gfi1ab	100	57.317	Astyanax_mexicanus
ENSHCOG00000008590	gfi1ab	100	51.542	ENSBTAG00000016723	GFI1	100	53.229	Bos_taurus
ENSHCOG00000008590	gfi1ab	100	51.448	ENSCJAG00000017609	GFI1	100	52.784	Callithrix_jacchus
ENSHCOG00000008590	gfi1ab	100	50.776	ENSCHIG00000016135	GFI1	100	53.363	Capra_hircus
ENSHCOG00000008590	gfi1ab	100	50.885	ENSCPOG00000011727	GFI1	100	53.795	Cavia_porcellus
ENSHCOG00000008590	gfi1ab	100	51.435	ENSCCAG00000036072	GFI1	100	52.412	Cebus_capucinus
ENSHCOG00000008590	gfi1ab	100	51.435	ENSCATG00000037873	GFI1	100	53.070	Cercocebus_atys
ENSHCOG00000008590	gfi1ab	99	71.605	ENSCLAG00000005915	GFI1	100	52.466	Chinchilla_lanigera
ENSHCOG00000008590	gfi1ab	98	46.076	ENSCSAG00000001469	GFI1	100	48.241	Chlorocebus_sabaeus
ENSHCOG00000008590	gfi1ab	100	51.002	ENSCANG00000034077	GFI1	100	52.655	Colobus_angolensis_palliatus
ENSHCOG00000008590	gfi1ab	100	50.670	ENSCGRG00001015432	Gfi1	100	52.455	Cricetulus_griseus_chok1gshd
ENSHCOG00000008590	gfi1ab	100	53.901	ENSCSEG00000017729	GFI1	100	54.137	Cynoglossus_semilaevis
ENSHCOG00000008590	gfi1ab	100	51.942	ENSCVAG00000004930	GFI1	100	53.521	Cyprinodon_variegatus
ENSHCOG00000008590	gfi1ab	100	60.482	ENSCVAG00000011828	gfi1ab	100	60.482	Cyprinodon_variegatus
ENSHCOG00000008590	gfi1ab	100	57.075	ENSDARG00000044457	gfi1ab	100	58.685	Danio_rerio
ENSHCOG00000008590	gfi1ab	100	52.339	ENSDNOG00000000782	GFI1	97	53.452	Dasypus_novemcinctus
ENSHCOG00000008590	gfi1ab	100	52.822	ENSEASG00005015509	GFI1	86	53.499	Equus_asinus_asinus
ENSHCOG00000008590	gfi1ab	98	44.444	ENSECAG00000006647	GFI1	97	45.139	Equus_caballus
ENSHCOG00000008590	gfi1ab	100	51.693	ENSEEUG00000000198	GFI1	100	53.047	Erinaceus_europaeus
ENSHCOG00000008590	gfi1ab	99	40.898	ENSELUG00000006948	-	99	41.147	Esox_lucius
ENSHCOG00000008590	gfi1ab	100	57.277	ENSELUG00000003015	gfi1ab	99	57.277	Esox_lucius
ENSHCOG00000008590	gfi1ab	100	54.394	ENSELUG00000019033	GFI1	100	55.819	Esox_lucius
ENSHCOG00000008590	gfi1ab	100	52.000	ENSFCAG00000005914	GFI1	100	54.222	Felis_catus
ENSHCOG00000008590	gfi1ab	100	53.521	ENSFHEG00000000341	GFI1	100	54.695	Fundulus_heteroclitus
ENSHCOG00000008590	gfi1ab	100	77.982	ENSFHEG00000002747	-	98	39.231	Fundulus_heteroclitus
ENSHCOG00000008590	gfi1ab	100	63.221	ENSFHEG00000010997	gfi1ab	100	63.221	Fundulus_heteroclitus
ENSHCOG00000008590	gfi1ab	100	58.435	ENSGMOG00000007737	gfi1ab	100	58.435	Gadus_morhua
ENSHCOG00000008590	gfi1ab	100	53.738	ENSGALG00000043650	GFI1	100	54.907	Gallus_gallus
ENSHCOG00000008590	gfi1ab	72	60.870	ENSGAFG00000018063	GFI1	100	53.521	Gambusia_affinis
ENSHCOG00000008590	gfi1ab	100	62.619	ENSGAFG00000016637	gfi1ab	100	62.619	Gambusia_affinis
ENSHCOG00000008590	gfi1ab	100	62.319	ENSGACG00000004257	gfi1ab	97	62.560	Gasterosteus_aculeatus
ENSHCOG00000008590	gfi1ab	100	51.002	ENSGGOG00000005320	GFI1	100	52.655	Gorilla_gorilla
ENSHCOG00000008590	gfi1ab	100	63.210	ENSHBUG00000011969	gfi1ab	100	63.210	Haplochromis_burtoni
ENSHCOG00000008590	gfi1ab	100	51.562	ENSHGLG00000008020	GFI1	100	54.036	Heterocephalus_glaber_female
ENSHCOG00000008590	gfi1ab	100	51.562	ENSHGLG00100000610	GFI1	100	54.036	Heterocephalus_glaber_male
ENSHCOG00000008590	gfi1ab	100	57.213	ENSIPUG00000010071	gfi1ab	87	57.213	Ictalurus_punctatus
ENSHCOG00000008590	gfi1ab	100	54.940	ENSIPUG00000013414	GFI1	100	54.940	Ictalurus_punctatus
ENSHCOG00000008590	gfi1ab	100	50.773	ENSSTOG00000014583	GFI1	100	53.111	Ictidomys_tridecemlineatus
ENSHCOG00000008590	gfi1ab	100	60.000	ENSKMAG00000003810	gfi1ab	100	60.000	Kryptolebias_marmoratus
ENSHCOG00000008590	gfi1ab	100	62.440	ENSLBEG00000027776	gfi1ab	100	62.169	Labrus_bergylta
ENSHCOG00000008590	gfi1ab	99	43.687	ENSLACG00000017590	-	99	43.250	Latimeria_chalumnae
ENSHCOG00000008590	gfi1ab	100	54.265	ENSLACG00000013362	GFI1	98	54.502	Latimeria_chalumnae
ENSHCOG00000008590	gfi1ab	100	55.896	ENSLOCG00000004711	gfi1ab	100	57.311	Lepisosteus_oculatus
ENSHCOG00000008590	gfi1ab	100	53.009	ENSLAFG00000018346	GFI1	100	55.904	Loxodonta_africana
ENSHCOG00000008590	gfi1ab	100	51.435	ENSMFAG00000045801	GFI1	100	53.070	Macaca_fascicularis
ENSHCOG00000008590	gfi1ab	100	51.435	ENSMNEG00000036338	GFI1	100	53.070	Macaca_nemestrina
ENSHCOG00000008590	gfi1ab	100	51.435	ENSMLEG00000036181	GFI1	100	53.070	Mandrillus_leucophaeus
ENSHCOG00000008590	gfi1ab	100	62.143	ENSMAMG00000008125	gfi1ab	100	62.143	Mastacembelus_armatus
ENSHCOG00000008590	gfi1ab	100	63.462	ENSMZEG00005009895	gfi1ab	100	63.462	Maylandia_zebra
ENSHCOG00000008590	gfi1ab	87	56.510	ENSMGAG00000008187	GFI1	97	57.895	Meleagris_gallopavo
ENSHCOG00000008590	gfi1ab	100	62.255	ENSMMOG00000005556	gfi1ab	100	62.255	Mola_mola
ENSHCOG00000008590	gfi1ab	100	51.648	ENSMODG00000011802	GFI1	100	53.057	Monodelphis_domestica
ENSHCOG00000008590	gfi1ab	100	62.439	ENSMALG00000014672	gfi1ab	100	62.439	Monopterus_albus
ENSHCOG00000008590	gfi1ab	100	51.214	MGP_CAROLIEiJ_G0027508	Gfi1	100	91.852	Mus_caroli
ENSHCOG00000008590	gfi1ab	100	51.448	ENSMUSG00000029275	Gfi1	100	52.784	Mus_musculus
ENSHCOG00000008590	gfi1ab	100	51.982	MGP_PahariEiJ_G0017280	Gfi1	100	91.852	Mus_pahari
ENSHCOG00000008590	gfi1ab	100	51.002	MGP_SPRETEiJ_G0028507	Gfi1	100	52.784	Mus_spretus
ENSHCOG00000008590	gfi1ab	100	54.846	ENSMPUG00000004178	GFI1	97	56.028	Mustela_putorius_furo
ENSHCOG00000008590	gfi1ab	100	52.125	ENSMLUG00000015191	GFI1	97	53.378	Myotis_lucifugus
ENSHCOG00000008590	gfi1ab	100	62.559	ENSNBRG00000015774	gfi1ab	100	62.559	Neolamprologus_brichardi
ENSHCOG00000008590	gfi1ab	87	53.747	ENSNLEG00000010470	GFI1	90	56.072	Nomascus_leucogenys
ENSHCOG00000008590	gfi1ab	100	51.327	ENSOPRG00000001473	GFI1	100	52.902	Ochotona_princeps
ENSHCOG00000008590	gfi1ab	100	63.221	ENSONIG00000019246	gfi1ab	100	63.221	Oreochromis_niloticus
ENSHCOG00000008590	gfi1ab	98	45.363	ENSOCUG00000023553	GFI1	93	47.704	Oryctolagus_cuniculus
ENSHCOG00000008590	gfi1ab	100	54.412	ENSORLG00000005060	GFI1	100	55.637	Oryzias_latipes
ENSHCOG00000008590	gfi1ab	100	60.577	ENSORLG00000013806	gfi1ab	100	60.577	Oryzias_latipes
ENSHCOG00000008590	gfi1ab	100	54.987	ENSORLG00020002817	GFI1	100	54.987	Oryzias_latipes_hni
ENSHCOG00000008590	gfi1ab	100	60.922	ENSORLG00020001602	gfi1ab	100	60.922	Oryzias_latipes_hni
ENSHCOG00000008590	gfi1ab	100	53.545	ENSORLG00015006070	GFI1	100	55.257	Oryzias_latipes_hsok
ENSHCOG00000008590	gfi1ab	100	55.000	ENSOMEG00000016722	GFI1	100	55.344	Oryzias_melastigma
ENSHCOG00000008590	gfi1ab	100	54.863	ENSOGAG00000027913	GFI1	100	56.359	Otolemur_garnettii
ENSHCOG00000008590	gfi1ab	100	53.902	ENSPPAG00000042186	GFI1	100	55.718	Pan_paniscus
ENSHCOG00000008590	gfi1ab	100	52.000	ENSPPRG00000007521	GFI1	100	54.222	Panthera_pardus
ENSHCOG00000008590	gfi1ab	100	50.780	ENSPTRG00000043053	GFI1	100	52.434	Pan_troglodytes
ENSHCOG00000008590	gfi1ab	100	51.435	ENSPANG00000016433	GFI1	100	53.070	Papio_anubis
ENSHCOG00000008590	gfi1ab	100	59.016	ENSPKIG00000004263	GFI1	100	59.016	Paramormyrops_kingsleyae
ENSHCOG00000008590	gfi1ab	87	56.787	ENSPSIG00000008734	GFI1	94	58.172	Pelodiscus_sinensis
ENSHCOG00000008590	gfi1ab	100	59.852	ENSPMGG00000012546	gfi1ab	100	60.099	Periophthalmus_magnuspinnatus
ENSHCOG00000008590	gfi1ab	50	89.881	ENSPMGG00000011041	GFI1	62	89.881	Periophthalmus_magnuspinnatus
ENSHCOG00000008590	gfi1ab	100	50.667	ENSPCIG00000013728	GFI1	100	52.667	Phascolarctos_cinereus
ENSHCOG00000008590	gfi1ab	100	62.619	ENSPFOG00000023214	gfi1ab	100	62.619	Poecilia_formosa
ENSHCOG00000008590	gfi1ab	72	61.000	ENSPLAG00000005376	GFI1	91	53.846	Poecilia_latipinna
ENSHCOG00000008590	gfi1ab	100	62.619	ENSPLAG00000010879	gfi1ab	100	62.619	Poecilia_latipinna
ENSHCOG00000008590	gfi1ab	100	62.857	ENSPMEG00000013694	gfi1ab	100	62.857	Poecilia_mexicana
ENSHCOG00000008590	gfi1ab	71	61.356	ENSPMEG00000019299	GFI1	100	54.098	Poecilia_mexicana
ENSHCOG00000008590	gfi1ab	100	50.630	ENSPREG00000007997	GFI1	100	52.430	Poecilia_reticulata
ENSHCOG00000008590	gfi1ab	100	63.484	ENSPREG00000014097	gfi1ab	100	63.484	Poecilia_reticulata
ENSHCOG00000008590	gfi1ab	100	41.463	ENSPCAG00000011020	GFI1	100	42.794	Procavia_capensis
ENSHCOG00000008590	gfi1ab	100	50.110	ENSPVAG00000006928	GFI1	100	53.047	Pteropus_vampyrus
ENSHCOG00000008590	gfi1ab	100	63.462	ENSPNYG00000021183	gfi1ab	100	63.462	Pundamilia_nyererei
ENSHCOG00000008590	gfi1ab	100	58.293	ENSPNAG00000027258	gfi1ab	100	58.293	Pygocentrus_nattereri
ENSHCOG00000008590	gfi1ab	100	53.902	ENSPNAG00000028014	GFI1	100	53.902	Pygocentrus_nattereri
ENSHCOG00000008590	gfi1ab	60	52.966	ENSPNAG00000014299	-	70	52.966	Pygocentrus_nattereri
ENSHCOG00000008590	gfi1ab	100	51.549	ENSRNOG00000002042	Gfi1	100	52.655	Rattus_norvegicus
ENSHCOG00000008590	gfi1ab	100	51.002	ENSRBIG00000036467	GFI1	100	52.876	Rhinopithecus_bieti
ENSHCOG00000008590	gfi1ab	100	51.002	ENSRROG00000031687	GFI1	100	52.876	Rhinopithecus_roxellana
ENSHCOG00000008590	gfi1ab	100	51.448	ENSSBOG00000031300	GFI1	100	52.655	Saimiri_boliviensis_boliviensis
ENSHCOG00000008590	gfi1ab	100	61.353	ENSSFOG00015020295	gfi1	100	61.353	Scleropages_formosus
ENSHCOG00000008590	gfi1ab	100	62.350	ENSSMAG00000002782	gfi1ab	100	62.350	Scophthalmus_maximus
ENSHCOG00000008590	gfi1ab	100	63.210	ENSSDUG00000022410	gfi1ab	100	63.882	Seriola_dumerili
ENSHCOG00000008590	gfi1ab	100	62.963	ENSSLDG00000020163	gfi1ab	100	63.457	Seriola_lalandi_dorsalis
ENSHCOG00000008590	gfi1ab	68	69.014	ENSSPAG00000009140	gfi1ab	90	69.014	Stegastes_partitus
ENSHCOG00000008590	gfi1ab	100	53.244	ENSSSCG00000006902	GFI1	100	53.846	Sus_scrofa
ENSHCOG00000008590	gfi1ab	87	57.143	ENSTGUG00000006060	GFI1	97	58.543	Taeniopygia_guttata
ENSHCOG00000008590	gfi1ab	100	60.488	ENSTRUG00000000415	gfi1ab	100	61.707	Takifugu_rubripes
ENSHCOG00000008590	gfi1ab	100	60.766	ENSTNIG00000000651	gfi1ab	97	61.205	Tetraodon_nigroviridis
ENSHCOG00000008590	gfi1ab	100	51.351	ENSTTRG00000000082	GFI1	100	52.691	Tursiops_truncatus
ENSHCOG00000008590	gfi1ab	100	53.935	ENSUAMG00000021124	GFI1	91	55.093	Ursus_americanus
ENSHCOG00000008590	gfi1ab	100	55.501	ENSXETG00000023006	gfi1	98	56.724	Xenopus_tropicalis
ENSHCOG00000008590	gfi1ab	100	62.440	ENSXMAG00000010523	gfi1ab	100	62.440	Xiphophorus_maculatus
ENSHCOG00000008590	gfi1ab	57	55.144	ENSXMAG00000009274	GFI1	70	48.396	Xiphophorus_maculatus