EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000008598 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 482 bases
Position: chrLVHJ01056586.1:323-804
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000006753	RRM_1	PF00076.22	1.2e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000003150	-	387	-	ENSHCOP00000006753	128 (aa)	-	-

Gene Model

Click here to download ENSHCOG00000008598's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000008598's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000008598	-	65	34.940	ENSHCOG00000019356	rbm24a	71	33.735
ENSHCOG00000008598	-	56	43.056	ENSHCOG00000018058	-	64	43.056
ENSHCOG00000008598	-	59	44.000	ENSHCOG00000001170	cirbpa	65	43.590

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000008598	-	69	90.909	ENSG00000161547	SRSF2	67	91.954	Homo_sapiens
ENSHCOG00000008598	-	73	92.553	ENSACIG00000018502	srsf2a	50	95.349	Amphilophus_citrinellus
ENSHCOG00000008598	-	67	62.791	WBGene00004701	rsp-4	68	62.791	Caenorhabditis_elegans
ENSHCOG00000008598	-	67	79.070	ENSCING00000004198	-	51	80.000	Ciona_intestinalis
ENSHCOG00000008598	-	86	85.455	ENSDARG00000057484	srsf2a	74	93.103	Danio_rerio
ENSHCOG00000008598	-	69	90.909	ENSOANG00000002695	-	73	91.954	Ornithorhynchus_anatinus
ENSHCOG00000008598	-	69	92.045	ENSPMGG00000006860	-	52	91.954	Periophthalmus_magnuspinnatus
ENSHCOG00000008598	-	69	90.909	ENSPVAG00000014264	-	73	91.954	Pteropus_vampyrus