EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000008612 (Gene tree)
Gene ID: 109516351
Gene Symbol: sfpq
Alias: hm:zeh0027|wis|wu:fa11h12|wu:fd10f03|zgc:85935
Full Name: non-POU domain-containing octamer-binding protein-like
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 16964 bases
Position: chrKV879956.1:196593-213556
Accession: 109516351
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000021625	RRM_1	PF00076.22	2.7e-29	1	2
ENSHCOP00000021625	RRM_1	PF00076.22	2.7e-29	2	2
ENSHCOP00000006766	RRM_1	PF00076.22	2.9e-29	1	2
ENSHCOP00000006766	RRM_1	PF00076.22	2.9e-29	2	2
ENSHCOP00000006751	RRM_1	PF00076.22	9.3e-24	1	2
ENSHCOP00000006751	RRM_1	PF00076.22	9.3e-24	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000003123	-	2943	XM_019870831	ENSHCOP00000021625	707 (aa)	XP_019726390	UPI00094E9BD3
ENSHCOT00000003155	-	1614	-	ENSHCOP00000006751	537 (aa)	-	-
ENSHCOT00000003129	-	3511	XM_019870828	ENSHCOP00000006766	735 (aa)	XP_019726387	UPI00094EF707

Gene Model

Click here to download ENSHCOG00000008612's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000008612's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000008612	sfpq	65	52.528	ENSHCOG00000013251	pspc1	84	55.270
ENSHCOG00000008612	sfpq	77	54.333	ENSHCOG00000016441	nono	90	58.779

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000008612	sfpq	58	72.912	ENSG00000116560	SFPQ	83	80.108	Homo_sapiens
ENSHCOG00000008612	sfpq	99	78.744	ENSAPOG00000024257	sfpq	100	66.090	Acanthochromis_polyacanthus
ENSHCOG00000008612	sfpq	70	68.372	ENSAMEG00000000815	SFPQ	100	72.912	Ailuropoda_melanoleuca
ENSHCOG00000008612	sfpq	100	69.048	ENSACIG00000000905	sfpq	100	82.904	Amphilophus_citrinellus
ENSHCOG00000008612	sfpq	98	78.744	ENSAOCG00000002889	sfpq	100	67.729	Amphiprion_ocellaris
ENSHCOG00000008612	sfpq	98	78.744	ENSAPEG00000016556	sfpq	100	67.729	Amphiprion_percula
ENSHCOG00000008612	sfpq	90	82.505	ENSATEG00000002981	sfpq	100	81.944	Anabas_testudineus
ENSHCOG00000008612	sfpq	55	49.570	ENSANAG00000037798	-	99	55.398	Aotus_nancymaae
ENSHCOG00000008612	sfpq	66	59.214	ENSANAG00000027438	-	64	64.975	Aotus_nancymaae
ENSHCOG00000008612	sfpq	100	76.316	ENSACLG00000022332	sfpq	100	65.333	Astatotilapia_calliptera
ENSHCOG00000008612	sfpq	80	69.979	ENSAMXG00000011538	sfpq	64	80.952	Astyanax_mexicanus
ENSHCOG00000008612	sfpq	58	72.912	ENSBTAG00000016328	SFPQ	63	73.214	Bos_taurus
ENSHCOG00000008612	sfpq	58	72.912	ENSCJAG00000001431	SFPQ	63	73.214	Callithrix_jacchus
ENSHCOG00000008612	sfpq	60	74.018	ENSCAFG00000017608	-	64	69.406	Canis_familiaris
ENSHCOG00000008612	sfpq	86	59.259	ENSCAFG00000003595	-	67	73.258	Canis_familiaris
ENSHCOG00000008612	sfpq	70	65.349	ENSCAFG00000018271	-	66	69.683	Canis_familiaris
ENSHCOG00000008612	sfpq	70	65.349	ENSCAFG00020004881	-	66	70.136	Canis_lupus_dingo
ENSHCOG00000008612	sfpq	55	62.832	ENSCAFG00020010702	-	100	67.806	Canis_lupus_dingo
ENSHCOG00000008612	sfpq	58	72.912	ENSCHIG00000023097	SFPQ	63	73.214	Capra_hircus
ENSHCOG00000008612	sfpq	54	57.958	ENSTSYG00000035106	-	96	63.663	Carlito_syrichta
ENSHCOG00000008612	sfpq	55	66.097	ENSTSYG00000037120	-	100	73.164	Carlito_syrichta
ENSHCOG00000008612	sfpq	55	58.000	ENSCPOG00000015018	-	100	64.110	Cavia_porcellus
ENSHCOG00000008612	sfpq	86	60.039	ENSCCAG00000029361	-	63	73.214	Cebus_capucinus
ENSHCOG00000008612	sfpq	60	76.506	ENSCATG00000036179	-	53	78.082	Cercocebus_atys
ENSHCOG00000008612	sfpq	58	48.889	ENSCATG00000032664	-	62	49.227	Cercocebus_atys
ENSHCOG00000008612	sfpq	55	66.097	ENSCLAG00000009583	-	100	73.164	Chinchilla_lanigera
ENSHCOG00000008612	sfpq	58	72.912	ENSCSAG00000001082	SFPQ	63	73.214	Chlorocebus_sabaeus
ENSHCOG00000008612	sfpq	61	67.895	ENSCHOG00000009131	SFPQ	100	73.491	Choloepus_hoffmanni
ENSHCOG00000008612	sfpq	70	66.129	ENSCPBG00000018674	SFPQ	70	71.429	Chrysemys_picta_bellii
ENSHCOG00000008612	sfpq	55	66.097	ENSCANG00000028087	-	100	73.164	Colobus_angolensis_palliatus
ENSHCOG00000008612	sfpq	70	68.372	ENSCGRG00001011698	Sfpq	61	74.596	Cricetulus_griseus_chok1gshd
ENSHCOG00000008612	sfpq	70	68.298	ENSCGRG00000010128	Sfpq	95	74.134	Cricetulus_griseus_crigri
ENSHCOG00000008612	sfpq	100	62.348	ENSCSEG00000007852	sfpq	100	61.404	Cynoglossus_semilaevis
ENSHCOG00000008612	sfpq	96	71.325	ENSCVAG00000019538	sfpq	87	74.390	Cyprinodon_variegatus
ENSHCOG00000008612	sfpq	94	59.428	ENSDARG00000011564	sfpq	100	89.565	Danio_rerio
ENSHCOG00000008612	sfpq	70	68.372	ENSDNOG00000049454	SFPQ	63	73.214	Dasypus_novemcinctus
ENSHCOG00000008612	sfpq	58	72.912	ENSDORG00000008109	Sfpq	63	73.214	Dipodomys_ordii
ENSHCOG00000008612	sfpq	70	61.860	ENSETEG00000001095	SFPQ	61	67.667	Echinops_telfairi
ENSHCOG00000008612	sfpq	58	72.912	ENSEASG00005012012	SFPQ	63	73.214	Equus_asinus_asinus
ENSHCOG00000008612	sfpq	58	72.912	ENSECAG00000000642	SFPQ	63	73.214	Equus_caballus
ENSHCOG00000008612	sfpq	79	68.443	ENSELUG00000023145	sfpq	79	67.210	Esox_lucius
ENSHCOG00000008612	sfpq	58	72.912	ENSFCAG00000042862	SFPQ	63	73.214	Felis_catus
ENSHCOG00000008612	sfpq	55	64.387	ENSFALG00000000731	SFPQ	100	72.365	Ficedula_albicollis
ENSHCOG00000008612	sfpq	55	57.386	ENSFDAG00000017723	-	100	65.915	Fukomys_damarensis
ENSHCOG00000008612	sfpq	93	71.014	ENSFHEG00000015200	sfpq	100	62.549	Fundulus_heteroclitus
ENSHCOG00000008612	sfpq	99	66.498	ENSGMOG00000011950	SFPQ	99	82.599	Gadus_morhua
ENSHCOG00000008612	sfpq	94	60.661	ENSGMOG00000011957	sfpq	99	61.890	Gadus_morhua
ENSHCOG00000008612	sfpq	71	66.359	ENSGALG00000002514	SFPQ	66	73.721	Gallus_gallus
ENSHCOG00000008612	sfpq	91	75.749	ENSGAFG00000014571	sfpq	94	74.817	Gambusia_affinis
ENSHCOG00000008612	sfpq	99	66.883	ENSGACG00000002034	sfpq	98	80.931	Gasterosteus_aculeatus
ENSHCOG00000008612	sfpq	70	68.372	ENSGGOG00000026354	SFPQ	100	73.164	Gorilla_gorilla
ENSHCOG00000008612	sfpq	100	76.316	ENSHBUG00000016818	sfpq	100	65.600	Haplochromis_burtoni
ENSHCOG00000008612	sfpq	70	67.436	ENSHGLG00000012001	SFPQ	64	72.284	Heterocephalus_glaber_female
ENSHCOG00000008612	sfpq	55	66.097	ENSHGLG00100004136	-	100	73.164	Heterocephalus_glaber_male
ENSHCOG00000008612	sfpq	81	67.227	ENSIPUG00000013076	SFPQ	96	61.023	Ictalurus_punctatus
ENSHCOG00000008612	sfpq	55	66.097	ENSSTOG00000014004	-	100	73.164	Ictidomys_tridecemlineatus
ENSHCOG00000008612	sfpq	70	67.674	ENSJJAG00000015633	Sfpq	63	73.214	Jaculus_jaculus
ENSHCOG00000008612	sfpq	100	72.210	ENSKMAG00000000238	sfpq	100	62.374	Kryptolebias_marmoratus
ENSHCOG00000008612	sfpq	82	78.723	ENSLBEG00000003163	sfpq	98	63.576	Labrus_bergylta
ENSHCOG00000008612	sfpq	65	74.438	ENSLACG00000014728	SFPQ	70	72.917	Latimeria_chalumnae
ENSHCOG00000008612	sfpq	88	62.157	ENSLOCG00000001067	sfpq	90	62.941	Lepisosteus_oculatus
ENSHCOG00000008612	sfpq	70	68.140	ENSLAFG00000015951	SFPQ	70	72.545	Loxodonta_africana
ENSHCOG00000008612	sfpq	70	68.372	ENSMFAG00000000797	SFPQ	63	73.214	Macaca_fascicularis
ENSHCOG00000008612	sfpq	70	68.372	ENSMMUG00000019154	SFPQ	63	73.214	Macaca_mulatta
ENSHCOG00000008612	sfpq	58	72.912	ENSMNEG00000038895	SFPQ	63	73.214	Macaca_nemestrina
ENSHCOG00000008612	sfpq	51	58.896	ENSMLEG00000035352	-	99	66.565	Mandrillus_leucophaeus
ENSHCOG00000008612	sfpq	55	66.860	ENSMLEG00000010643	-	100	70.904	Mandrillus_leucophaeus
ENSHCOG00000008612	sfpq	95	77.115	ENSMAMG00000007875	sfpq	100	67.717	Mastacembelus_armatus
ENSHCOG00000008612	sfpq	100	76.316	ENSMZEG00005026091	sfpq	89	76.316	Maylandia_zebra
ENSHCOG00000008612	sfpq	53	77.551	ENSMGAG00000004237	SFPQ	100	70.332	Meleagris_gallopavo
ENSHCOG00000008612	sfpq	70	68.372	ENSMAUG00000006402	Sfpq	61	74.596	Mesocricetus_auratus
ENSHCOG00000008612	sfpq	58	72.912	ENSMICG00000027265	SFPQ	63	73.214	Microcebus_murinus
ENSHCOG00000008612	sfpq	70	69.668	ENSMOCG00000019075	Sfpq	92	70.312	Microtus_ochrogaster
ENSHCOG00000008612	sfpq	100	64.882	ENSMMOG00000001074	sfpq	100	64.826	Mola_mola
ENSHCOG00000008612	sfpq	70	67.133	ENSMODG00000017937	SFPQ	66	72.624	Monodelphis_domestica
ENSHCOG00000008612	sfpq	96	74.131	ENSMALG00000010381	sfpq	99	85.564	Monopterus_albus
ENSHCOG00000008612	sfpq	70	68.372	MGP_CAROLIEiJ_G0026487	Sfpq	64	72.991	Mus_caroli
ENSHCOG00000008612	sfpq	70	68.372	ENSMUSG00000028820	Sfpq	64	72.991	Mus_musculus
ENSHCOG00000008612	sfpq	70	68.372	MGP_PahariEiJ_G0028818	Sfpq	64	72.991	Mus_pahari
ENSHCOG00000008612	sfpq	70	68.372	MGP_SPRETEiJ_G0027466	Sfpq	64	72.991	Mus_spretus
ENSHCOG00000008612	sfpq	70	67.907	ENSMLUG00000027090	SFPQ	99	72.809	Myotis_lucifugus
ENSHCOG00000008612	sfpq	70	68.605	ENSNGAG00000000888	Sfpq	63	73.214	Nannospalax_galili
ENSHCOG00000008612	sfpq	100	76.794	ENSNBRG00000017479	sfpq	90	79.576	Neolamprologus_brichardi
ENSHCOG00000008612	sfpq	55	66.097	ENSNLEG00000035521	-	100	73.164	Nomascus_leucogenys
ENSHCOG00000008612	sfpq	70	67.681	ENSMEUG00000014082	SFPQ	63	72.789	Notamacropus_eugenii
ENSHCOG00000008612	sfpq	72	67.120	ENSOPRG00000013696	SFPQ	65	71.058	Ochotona_princeps
ENSHCOG00000008612	sfpq	59	68.807	ENSODEG00000005485	SFPQ	78	63.636	Octodon_degus
ENSHCOG00000008612	sfpq	100	76.077	ENSONIG00000017737	sfpq	88	76.077	Oreochromis_niloticus
ENSHCOG00000008612	sfpq	55	64.857	ENSOANG00000008789	-	100	72.934	Ornithorhynchus_anatinus
ENSHCOG00000008612	sfpq	70	68.372	ENSOCUG00000001877	SFPQ	85	74.596	Oryctolagus_cuniculus
ENSHCOG00000008612	sfpq	100	69.783	ENSORLG00000007459	sfpq	100	62.549	Oryzias_latipes
ENSHCOG00000008612	sfpq	99	75.604	ENSORLG00020011818	sfpq	100	62.681	Oryzias_latipes_hni
ENSHCOG00000008612	sfpq	92	82.659	ENSORLG00015002131	sfpq	100	61.806	Oryzias_latipes_hsok
ENSHCOG00000008612	sfpq	100	68.553	ENSOMEG00000018020	sfpq	100	62.176	Oryzias_melastigma
ENSHCOG00000008612	sfpq	86	59.259	ENSOGAG00000027710	SFPQ	84	73.438	Otolemur_garnettii
ENSHCOG00000008612	sfpq	71	68.287	ENSOARG00000019439	SFPQ	66	74.023	Ovis_aries
ENSHCOG00000008612	sfpq	70	68.372	ENSPPAG00000030078	SFPQ	63	73.214	Pan_paniscus
ENSHCOG00000008612	sfpq	55	65.909	ENSPPRG00000015478	-	100	72.958	Panthera_pardus
ENSHCOG00000008612	sfpq	55	66.097	ENSPTIG00000007710	-	100	73.164	Panthera_tigris_altaica
ENSHCOG00000008612	sfpq	70	62.558	ENSPTRG00000000518	SFPQ	61	67.634	Pan_troglodytes
ENSHCOG00000008612	sfpq	70	68.372	ENSPANG00000005380	SFPQ	66	73.214	Papio_anubis
ENSHCOG00000008612	sfpq	93	61.634	ENSPKIG00000023035	sfpq	96	62.081	Paramormyrops_kingsleyae
ENSHCOG00000008612	sfpq	70	66.977	ENSPSIG00000011494	SFPQ	99	73.318	Pelodiscus_sinensis
ENSHCOG00000008612	sfpq	100	64.695	ENSPMGG00000023883	sfpq	100	66.011	Periophthalmus_magnuspinnatus
ENSHCOG00000008612	sfpq	70	68.372	ENSPEMG00000009794	Sfpq	92	72.768	Peromyscus_maniculatus_bairdii
ENSHCOG00000008612	sfpq	58	68.454	ENSPMAG00000005583	sfpq	83	64.031	Petromyzon_marinus
ENSHCOG00000008612	sfpq	61	77.581	ENSPCIG00000000923	SFPQ	63	72.624	Phascolarctos_cinereus
ENSHCOG00000008612	sfpq	99	70.208	ENSPFOG00000003127	sfpq	92	80.392	Poecilia_formosa
ENSHCOG00000008612	sfpq	91	77.095	ENSPREG00000008060	sfpq	100	61.307	Poecilia_reticulata
ENSHCOG00000008612	sfpq	58	72.912	ENSPPYG00000001560	SFPQ	63	73.214	Pongo_abelii
ENSHCOG00000008612	sfpq	69	68.065	ENSPCAG00000006164	SFPQ	60	74.306	Procavia_capensis
ENSHCOG00000008612	sfpq	58	72.912	ENSPCOG00000027127	SFPQ	63	73.214	Propithecus_coquereli
ENSHCOG00000008612	sfpq	70	66.822	ENSPVAG00000001865	SFPQ	63	71.429	Pteropus_vampyrus
ENSHCOG00000008612	sfpq	100	76.316	ENSPNYG00000007494	sfpq	100	65.867	Pundamilia_nyererei
ENSHCOG00000008612	sfpq	94	58.528	ENSPNAG00000002128	sfpq	95	62.655	Pygocentrus_nattereri
ENSHCOG00000008612	sfpq	70	68.372	ENSRNOG00000058461	Sfpq	64	72.991	Rattus_norvegicus
ENSHCOG00000008612	sfpq	70	62.704	ENSRBIG00000035286	SFPQ	100	73.164	Rhinopithecus_bieti
ENSHCOG00000008612	sfpq	70	68.372	ENSRROG00000040992	SFPQ	100	73.164	Rhinopithecus_roxellana
ENSHCOG00000008612	sfpq	55	66.097	ENSSBOG00000024972	-	100	73.164	Saimiri_boliviensis_boliviensis
ENSHCOG00000008612	sfpq	55	63.506	ENSSHAG00000012312	-	100	70.000	Sarcophilus_harrisii
ENSHCOG00000008612	sfpq	61	77.581	ENSSHAG00000016107	-	96	69.866	Sarcophilus_harrisii
ENSHCOG00000008612	sfpq	94	59.892	ENSSFOG00015009289	sfpq	79	80.600	Scleropages_formosus
ENSHCOG00000008612	sfpq	90	79.418	ENSSMAG00000018201	sfpq	100	81.169	Scophthalmus_maximus
ENSHCOG00000008612	sfpq	100	67.134	ENSSDUG00000008402	sfpq	100	65.679	Seriola_dumerili
ENSHCOG00000008612	sfpq	94	81.148	ENSSLDG00000018917	sfpq	100	80.328	Seriola_lalandi_dorsalis
ENSHCOG00000008612	sfpq	59	67.120	ENSSARG00000006409	SFPQ	100	73.854	Sorex_araneus
ENSHCOG00000008612	sfpq	100	75.000	ENSSPAG00000016550	sfpq	89	78.502	Stegastes_partitus
ENSHCOG00000008612	sfpq	58	72.912	ENSSSCG00000035690	SFPQ	63	73.214	Sus_scrofa
ENSHCOG00000008612	sfpq	70	66.977	ENSTGUG00000001722	SFPQ	99	73.488	Taeniopygia_guttata
ENSHCOG00000008612	sfpq	100	79.562	ENSTRUG00000003783	sfpq	87	82.703	Takifugu_rubripes
ENSHCOG00000008612	sfpq	85	63.815	ENSTNIG00000011331	sfpq	81	80.124	Tetraodon_nigroviridis
ENSHCOG00000008612	sfpq	70	65.814	ENSTTRG00000013930	SFPQ	63	70.246	Tursiops_truncatus
ENSHCOG00000008612	sfpq	55	63.818	ENSUMAG00000008056	-	100	70.904	Ursus_maritimus
ENSHCOG00000008612	sfpq	52	78.819	ENSVPAG00000006960	-	60	67.839	Vicugna_pacos
ENSHCOG00000008612	sfpq	55	61.947	ENSVVUG00000000874	-	100	67.630	Vulpes_vulpes
ENSHCOG00000008612	sfpq	61	75.964	ENSXETG00000009682	sfpq	99	77.287	Xenopus_tropicalis
ENSHCOG00000008612	sfpq	100	62.568	ENSXMAG00000016391	sfpq	100	62.008	Xiphophorus_maculatus