EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000008618 (Gene tree)
Gene ID: 109511461
Gene Symbol: thumpd1
Alias: zgc:77221
Full Name: THUMP domain containing 1
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 6936 bases
Position: chrKV880534.1:1559979-1566914
Accession: 109511461
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000006777	THUMP	PF02926.17	5.5e-12	1	1
ENSHCOP00000021631	THUMP	PF02926.17	5.5e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000003108	-	3131	XM_019862585	ENSHCOP00000006777	418 (aa)	XP_019718144	-
ENSHCOT00000003116	-	2286	XM_019862583	ENSHCOP00000021631	418 (aa)	XP_019718142	-

Gene Model

Click here to download ENSHCOG00000008618's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000008618's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000008618	thumpd1	56	54.918	ENSG00000066654	THUMPD1	93	51.852	Homo_sapiens
ENSHCOG00000008618	thumpd1	62	64.626	ENSAPOG00000008440	thumpd1	86	67.451	Acanthochromis_polyacanthus
ENSHCOG00000008618	thumpd1	56	55.738	ENSAMEG00000006257	THUMPD1	67	55.738	Ailuropoda_melanoleuca
ENSHCOG00000008618	thumpd1	55	74.026	ENSACIG00000024395	thumpd1	71	74.026	Amphilophus_citrinellus
ENSHCOG00000008618	thumpd1	56	73.529	ENSAOCG00000003509	thumpd1	74	74.790	Amphiprion_ocellaris
ENSHCOG00000008618	thumpd1	56	73.529	ENSAPEG00000010515	thumpd1	74	74.790	Amphiprion_percula
ENSHCOG00000008618	thumpd1	56	72.152	ENSATEG00000004737	thumpd1	74	72.152	Anabas_testudineus
ENSHCOG00000008618	thumpd1	66	49.333	ENSACAG00000009625	-	77	53.600	Anolis_carolinensis
ENSHCOG00000008618	thumpd1	56	55.738	ENSANAG00000026882	-	69	55.738	Aotus_nancymaae
ENSHCOG00000008618	thumpd1	56	43.443	ENSANAG00000027040	-	65	43.443	Aotus_nancymaae
ENSHCOG00000008618	thumpd1	56	43.697	ENSANAG00000027311	-	67	43.697	Aotus_nancymaae
ENSHCOG00000008618	thumpd1	56	72.269	ENSACLG00000004830	thumpd1	74	73.109	Astatotilapia_calliptera
ENSHCOG00000008618	thumpd1	71	51.553	ENSAMXG00000012356	thumpd1	70	61.039	Astyanax_mexicanus
ENSHCOG00000008618	thumpd1	73	46.131	ENSBTAG00000047673	THUMPD1	65	56.466	Bos_taurus
ENSHCOG00000008618	thumpd1	52	57.391	ENSCJAG00000009499	THUMPD1	69	56.148	Callithrix_jacchus
ENSHCOG00000008618	thumpd1	56	54.918	ENSCAFG00000017985	THUMPD1	68	54.918	Canis_familiaris
ENSHCOG00000008618	thumpd1	56	54.918	ENSCAFG00020021861	THUMPD1	68	54.918	Canis_lupus_dingo
ENSHCOG00000008618	thumpd1	53	57.143	ENSCHIG00000010134	THUMPD1	65	57.143	Capra_hircus
ENSHCOG00000008618	thumpd1	56	54.918	ENSTSYG00000011537	THUMPD1	69	54.918	Carlito_syrichta
ENSHCOG00000008618	thumpd1	52	57.642	ENSCPOG00000008919	-	69	56.379	Cavia_porcellus
ENSHCOG00000008618	thumpd1	52	57.642	ENSCPOG00000023684	-	69	56.379	Cavia_porcellus
ENSHCOG00000008618	thumpd1	72	44.048	ENSCCAG00000019379	-	61	52.869	Cebus_capucinus
ENSHCOG00000008618	thumpd1	53	57.328	ENSCCAG00000030205	THUMPD1	66	57.328	Cebus_capucinus
ENSHCOG00000008618	thumpd1	73	37.685	ENSCATG00000020844	-	65	45.690	Cercocebus_atys
ENSHCOG00000008618	thumpd1	56	55.328	ENSCATG00000040309	THUMPD1	69	55.328	Cercocebus_atys
ENSHCOG00000008618	thumpd1	56	56.379	ENSCLAG00000016508	THUMPD1	69	56.379	Chinchilla_lanigera
ENSHCOG00000008618	thumpd1	56	42.683	ENSCSAG00000009860	-	55	42.683	Chlorocebus_sabaeus
ENSHCOG00000008618	thumpd1	56	55.328	ENSCSAG00000007610	THUMPD1	69	55.328	Chlorocebus_sabaeus
ENSHCOG00000008618	thumpd1	56	55.556	ENSCHOG00000005587	THUMPD1	68	55.556	Choloepus_hoffmanni
ENSHCOG00000008618	thumpd1	56	57.083	ENSCPBG00000019055	THUMPD1	68	57.083	Chrysemys_picta_bellii
ENSHCOG00000008618	thumpd1	67	41.118	ENSCANG00000035822	-	64	50.251	Colobus_angolensis_palliatus
ENSHCOG00000008618	thumpd1	56	55.738	ENSCGRG00001014829	Thumpd1	69	55.738	Cricetulus_griseus_chok1gshd
ENSHCOG00000008618	thumpd1	56	55.738	ENSCGRG00000000060	Thumpd1	69	55.738	Cricetulus_griseus_crigri
ENSHCOG00000008618	thumpd1	56	69.915	ENSCSEG00000002041	thumpd1	76	70.339	Cynoglossus_semilaevis
ENSHCOG00000008618	thumpd1	56	71.008	ENSCVAG00000014960	thumpd1	74	71.429	Cyprinodon_variegatus
ENSHCOG00000008618	thumpd1	54	58.079	ENSDARG00000100264	thumpd1	66	59.565	Danio_rerio
ENSHCOG00000008618	thumpd1	56	56.790	ENSDNOG00000043510	THUMPD1	68	56.790	Dasypus_novemcinctus
ENSHCOG00000008618	thumpd1	56	54.878	ENSDORG00000028216	Thumpd1	69	54.878	Dipodomys_ordii
ENSHCOG00000008618	thumpd1	50	33.333	FBgn0035532	CG15014	72	32.520	Drosophila_melanogaster
ENSHCOG00000008618	thumpd1	54	51.082	ENSETEG00000002763	THUMPD1	55	51.724	Echinops_telfairi
ENSHCOG00000008618	thumpd1	54	37.917	ENSEBUG00000011011	THUMPD1	64	37.917	Eptatretus_burgeri
ENSHCOG00000008618	thumpd1	75	44.477	ENSECAG00000005354	THUMPD1	65	54.936	Equus_caballus
ENSHCOG00000008618	thumpd1	53	57.759	ENSEEUG00000011256	THUMPD1	56	57.759	Erinaceus_europaeus
ENSHCOG00000008618	thumpd1	56	68.644	ENSELUG00000013612	thumpd1	55	69.068	Esox_lucius
ENSHCOG00000008618	thumpd1	56	55.328	ENSFCAG00000039296	THUMPD1	68	55.328	Felis_catus
ENSHCOG00000008618	thumpd1	60	62.766	ENSFHEG00000013319	thumpd1	69	71.074	Fundulus_heteroclitus
ENSHCOG00000008618	thumpd1	66	54.967	ENSGMOG00000003369	thumpd1	74	64.681	Gadus_morhua
ENSHCOG00000008618	thumpd1	56	71.548	ENSGAFG00000011000	thumpd1	75	71.967	Gambusia_affinis
ENSHCOG00000008618	thumpd1	70	59.016	ENSGACG00000019511	thumpd1	73	69.492	Gasterosteus_aculeatus
ENSHCOG00000008618	thumpd1	56	56.667	ENSGAGG00000008225	THUMPD1	74	56.667	Gopherus_agassizii
ENSHCOG00000008618	thumpd1	65	42.500	ENSGGOG00000043232	-	71	43.882	Gorilla_gorilla
ENSHCOG00000008618	thumpd1	56	55.328	ENSGGOG00000005231	-	56	55.328	Gorilla_gorilla
ENSHCOG00000008618	thumpd1	56	72.269	ENSHBUG00000017996	thumpd1	74	73.109	Haplochromis_burtoni
ENSHCOG00000008618	thumpd1	56	56.379	ENSHGLG00000011001	-	69	56.379	Heterocephalus_glaber_female
ENSHCOG00000008618	thumpd1	56	56.790	ENSHGLG00100016023	THUMPD1	69	56.790	Heterocephalus_glaber_male
ENSHCOG00000008618	thumpd1	82	46.281	ENSIPUG00000012500	thumpd1	54	63.274	Ictalurus_punctatus
ENSHCOG00000008618	thumpd1	53	57.328	ENSSTOG00000007011	THUMPD1	66	57.328	Ictidomys_tridecemlineatus
ENSHCOG00000008618	thumpd1	53	55.411	ENSJJAG00000004295	-	65	55.411	Jaculus_jaculus
ENSHCOG00000008618	thumpd1	64	54.225	ENSKMAG00000009545	thumpd1	56	59.825	Kryptolebias_marmoratus
ENSHCOG00000008618	thumpd1	56	71.008	ENSLBEG00000009349	thumpd1	73	71.008	Labrus_bergylta
ENSHCOG00000008618	thumpd1	54	56.371	ENSLACG00000005833	THUMPD1	70	56.371	Latimeria_chalumnae
ENSHCOG00000008618	thumpd1	54	60.944	ENSLOCG00000000854	thumpd1	75	61.603	Lepisosteus_oculatus
ENSHCOG00000008618	thumpd1	52	57.826	ENSLAFG00000025838	THUMPD1	68	56.148	Loxodonta_africana
ENSHCOG00000008618	thumpd1	56	55.328	ENSMFAG00000036996	THUMPD1	69	55.328	Macaca_fascicularis
ENSHCOG00000008618	thumpd1	56	55.328	ENSMMUG00000004225	THUMPD1	69	55.328	Macaca_mulatta
ENSHCOG00000008618	thumpd1	56	55.328	ENSMNEG00000020726	THUMPD1	69	55.328	Macaca_nemestrina
ENSHCOG00000008618	thumpd1	56	55.328	ENSMLEG00000036436	THUMPD1	69	55.328	Mandrillus_leucophaeus
ENSHCOG00000008618	thumpd1	64	65.101	ENSMAMG00000006858	thumpd1	72	77.155	Mastacembelus_armatus
ENSHCOG00000008618	thumpd1	56	72.269	ENSMZEG00005013693	thumpd1	74	73.109	Maylandia_zebra
ENSHCOG00000008618	thumpd1	56	55.967	ENSMAUG00000013306	Thumpd1	69	55.967	Mesocricetus_auratus
ENSHCOG00000008618	thumpd1	76	45.349	ENSMICG00000038483	-	69	55.328	Microcebus_murinus
ENSHCOG00000008618	thumpd1	56	54.918	ENSMOCG00000003447	Thumpd1	69	54.918	Microtus_ochrogaster
ENSHCOG00000008618	thumpd1	58	62.222	ENSMMOG00000011323	thumpd1	69	69.264	Mola_mola
ENSHCOG00000008618	thumpd1	53	55.983	ENSMODG00000006971	-	96	44.663	Monodelphis_domestica
ENSHCOG00000008618	thumpd1	56	71.308	ENSMALG00000019522	thumpd1	76	72.574	Monopterus_albus
ENSHCOG00000008618	thumpd1	54	53.846	MGP_CAROLIEiJ_G0030382	Thumpd1	66	55.128	Mus_caroli
ENSHCOG00000008618	thumpd1	74	45.783	ENSMUSG00000030942	Thumpd1	66	55.128	Mus_musculus
ENSHCOG00000008618	thumpd1	69	46.341	MGP_PahariEiJ_G0013593	Thumpd1	66	55.085	Mus_pahari
ENSHCOG00000008618	thumpd1	72	45.092	ENSMLUG00000010547	THUMPD1	64	55.702	Myotis_lucifugus
ENSHCOG00000008618	thumpd1	53	56.897	ENSNGAG00000018643	Thumpd1	69	55.738	Nannospalax_galili
ENSHCOG00000008618	thumpd1	56	71.429	ENSNBRG00000006987	thumpd1	69	72.269	Neolamprologus_brichardi
ENSHCOG00000008618	thumpd1	56	54.918	ENSNLEG00000012369	THUMPD1	69	54.918	Nomascus_leucogenys
ENSHCOG00000008618	thumpd1	56	54.959	ENSODEG00000012360	THUMPD1	69	54.959	Octodon_degus
ENSHCOG00000008618	thumpd1	56	72.689	ENSONIG00000000146	thumpd1	83	73.529	Oreochromis_niloticus
ENSHCOG00000008618	thumpd1	66	48.148	ENSOANG00000014297	THUMPD1	65	54.148	Ornithorhynchus_anatinus
ENSHCOG00000008618	thumpd1	52	57.391	ENSOCUG00000009895	-	65	57.391	Oryctolagus_cuniculus
ENSHCOG00000008618	thumpd1	59	63.704	ENSORLG00000027557	thumpd1	88	63.704	Oryzias_latipes
ENSHCOG00000008618	thumpd1	59	63.941	ENSORLG00020010206	thumpd1	88	63.941	Oryzias_latipes_hni
ENSHCOG00000008618	thumpd1	59	63.569	ENSORLG00015009581	thumpd1	88	63.569	Oryzias_latipes_hsok
ENSHCOG00000008618	thumpd1	56	69.957	ENSOMEG00000019361	thumpd1	72	69.957	Oryzias_melastigma
ENSHCOG00000008618	thumpd1	74	46.567	ENSOGAG00000026723	THUMPD1	65	57.826	Otolemur_garnettii
ENSHCOG00000008618	thumpd1	74	46.154	ENSOARG00000013107	THUMPD1	65	56.897	Ovis_aries
ENSHCOG00000008618	thumpd1	73	41.640	ENSPPAG00000001653	-	68	53.365	Pan_paniscus
ENSHCOG00000008618	thumpd1	56	54.918	ENSPPAG00000033818	-	56	54.918	Pan_paniscus
ENSHCOG00000008618	thumpd1	56	56.148	ENSPPRG00000014118	-	68	56.148	Panthera_pardus
ENSHCOG00000008618	thumpd1	56	56.148	ENSPTIG00000013856	-	68	56.148	Panthera_tigris_altaica
ENSHCOG00000008618	thumpd1	56	54.918	ENSPTRG00000007848	THUMPD1	56	54.918	Pan_troglodytes
ENSHCOG00000008618	thumpd1	65	42.160	ENSPTRG00000046073	-	69	45.957	Pan_troglodytes
ENSHCOG00000008618	thumpd1	56	55.328	ENSPANG00000025507	THUMPD1	69	55.328	Papio_anubis
ENSHCOG00000008618	thumpd1	67	38.562	ENSPANG00000034881	-	64	47.264	Papio_anubis
ENSHCOG00000008618	thumpd1	54	60.262	ENSPKIG00000014491	thumpd1	70	61.135	Paramormyrops_kingsleyae
ENSHCOG00000008618	thumpd1	53	71.861	ENSPMGG00000014479	thumpd1	81	73.160	Periophthalmus_magnuspinnatus
ENSHCOG00000008618	thumpd1	56	71.250	ENSPFOG00000012649	thumpd1	74	71.667	Poecilia_formosa
ENSHCOG00000008618	thumpd1	56	71.130	ENSPLAG00000000137	thumpd1	74	71.548	Poecilia_latipinna
ENSHCOG00000008618	thumpd1	56	71.548	ENSPMEG00000007750	thumpd1	74	71.967	Poecilia_mexicana
ENSHCOG00000008618	thumpd1	53	71.304	ENSPREG00000000144	thumpd1	77	71.739	Poecilia_reticulata
ENSHCOG00000008618	thumpd1	76	45.930	ENSPCOG00000024663	THUMPD1	69	55.328	Propithecus_coquereli
ENSHCOG00000008618	thumpd1	56	53.689	ENSPVAG00000005659	-	68	53.689	Pteropus_vampyrus
ENSHCOG00000008618	thumpd1	56	72.269	ENSPNYG00000007061	thumpd1	73	73.109	Pundamilia_nyererei
ENSHCOG00000008618	thumpd1	50	62.963	ENSPNAG00000024872	thumpd1	72	63.889	Pygocentrus_nattereri
ENSHCOG00000008618	thumpd1	56	55.328	ENSRBIG00000040752	THUMPD1	69	55.328	Rhinopithecus_bieti
ENSHCOG00000008618	thumpd1	56	55.328	ENSRROG00000042189	THUMPD1	69	55.328	Rhinopithecus_roxellana
ENSHCOG00000008618	thumpd1	63	42.215	ENSRROG00000045699	-	67	50.251	Rhinopithecus_roxellana
ENSHCOG00000008618	thumpd1	53	57.759	ENSSBOG00000034246	THUMPD1	66	57.759	Saimiri_boliviensis_boliviensis
ENSHCOG00000008618	thumpd1	75	45.481	ENSSHAG00000003853	THUMPD1	65	58.190	Sarcophilus_harrisii
ENSHCOG00000008618	thumpd1	56	56.897	ENSSFOG00015007512	thumpd1	70	56.897	Scleropages_formosus
ENSHCOG00000008618	thumpd1	69	58.232	ENSSMAG00000000723	thumpd1	72	72.152	Scophthalmus_maximus
ENSHCOG00000008618	thumpd1	56	71.429	ENSSDUG00000014502	thumpd1	74	72.689	Seriola_dumerili
ENSHCOG00000008618	thumpd1	56	71.008	ENSSLDG00000007694	thumpd1	74	72.269	Seriola_lalandi_dorsalis
ENSHCOG00000008618	thumpd1	54	55.085	ENSSPUG00000005096	THUMPD1	75	54.217	Sphenodon_punctatus
ENSHCOG00000008618	thumpd1	56	72.689	ENSSPAG00000006993	thumpd1	74	73.950	Stegastes_partitus
ENSHCOG00000008618	thumpd1	56	55.918	ENSSSCG00000024748	THUMPD1	68	55.918	Sus_scrofa
ENSHCOG00000008618	thumpd1	59	52.091	ENSTGUG00000009247	THUMPD1	76	60.000	Taeniopygia_guttata
ENSHCOG00000008618	thumpd1	60	64.111	ENSTRUG00000015656	thumpd1	74	72.269	Takifugu_rubripes
ENSHCOG00000008618	thumpd1	57	64.552	ENSTNIG00000001584	thumpd1	88	65.672	Tetraodon_nigroviridis
ENSHCOG00000008618	thumpd1	56	54.545	ENSTBEG00000005252	THUMPD1	61	54.545	Tupaia_belangeri
ENSHCOG00000008618	thumpd1	76	47.851	ENSTTRG00000016435	THUMPD1	97	47.126	Tursiops_truncatus
ENSHCOG00000008618	thumpd1	72	46.847	ENSVPAG00000003422	THUMPD1	66	57.759	Vicugna_pacos
ENSHCOG00000008618	thumpd1	76	45.272	ENSVVUG00000023241	THUMPD1	68	54.918	Vulpes_vulpes
ENSHCOG00000008618	thumpd1	54	46.552	ENSXETG00000005539	thumpd1	81	46.835	Xenopus_tropicalis
ENSHCOG00000008618	thumpd1	56	70.711	ENSXMAG00000026052	thumpd1	75	71.130	Xiphophorus_maculatus