EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000008686 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 5703 bases
Position: chrKV880255.1:13561-19263
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000006839	zf-C2H2	PF00096.26	5.9e-26	1	3
ENSHCOP00000006839	zf-C2H2	PF00096.26	5.9e-26	2	3
ENSHCOP00000006839	zf-C2H2	PF00096.26	5.9e-26	3	3
ENSHCOP00000006839	zf-met	PF12874.7	9.9e-12	1	2
ENSHCOP00000006839	zf-met	PF12874.7	9.9e-12	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000003010	-	981	-	ENSHCOP00000006839	326 (aa)	-	-

Gene Model

Click here to download ENSHCOG00000008686's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000008686's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000008686	-	90	36.458	ENSHCOG00000008550	-	57	36.458
ENSHCOG00000008686	-	87	41.304	ENSHCOG00000008168	-	97	34.317
ENSHCOG00000008686	-	87	35.669	ENSHCOG00000014786	-	94	35.152
ENSHCOG00000008686	-	85	34.946	ENSHCOG00000001631	-	54	34.946
ENSHCOG00000008686	-	85	31.522	ENSHCOG00000001242	-	60	30.797
ENSHCOG00000008686	-	84	32.847	ENSHCOG00000001245	-	61	32.804
ENSHCOG00000008686	-	88	35.165	ENSHCOG00000007485	-	93	33.750
ENSHCOG00000008686	-	84	35.889	ENSHCOG00000020972	-	93	35.455
ENSHCOG00000008686	-	84	36.264	ENSHCOG00000019458	-	50	36.264
ENSHCOG00000008686	-	83	36.816	ENSHCOG00000003021	-	51	35.821
ENSHCOG00000008686	-	83	36.522	ENSHCOG00000001238	-	85	33.333
ENSHCOG00000008686	-	85	35.897	ENSHCOG00000012662	-	84	35.897
ENSHCOG00000008686	-	93	35.227	ENSHCOG00000011411	-	80	35.227
ENSHCOG00000008686	-	83	33.333	ENSHCOG00000008133	-	54	33.889
ENSHCOG00000008686	-	82	32.222	ENSHCOG00000014874	-	59	31.844
ENSHCOG00000008686	-	89	34.513	ENSHCOG00000019481	-	69	33.628
ENSHCOG00000008686	-	83	33.094	ENSHCOG00000020909	-	78	32.374
ENSHCOG00000008686	-	89	38.947	ENSHCOG00000015497	-	75	38.947
ENSHCOG00000008686	-	94	32.653	ENSHCOG00000014881	-	71	32.653
ENSHCOG00000008686	-	84	30.921	ENSHCOG00000019001	-	98	30.263
ENSHCOG00000008686	-	88	36.462	ENSHCOG00000015441	-	67	35.912
ENSHCOG00000008686	-	84	35.192	ENSHCOG00000019438	-	83	33.700
ENSHCOG00000008686	-	87	33.212	ENSHCOG00000001338	-	89	32.903
ENSHCOG00000008686	-	85	34.416	ENSHCOG00000014797	-	57	35.849
ENSHCOG00000008686	-	87	48.936	ENSHCOG00000014796	-	58	35.897
ENSHCOG00000008686	-	84	44.262	ENSHCOG00000001629	-	61	44.262
ENSHCOG00000008686	-	94	30.942	ENSHCOG00000000800	-	80	31.293
ENSHCOG00000008686	-	86	41.176	ENSHCOG00000001272	-	98	38.739
ENSHCOG00000008686	-	84	48.980	ENSHCOG00000001942	-	94	33.471
ENSHCOG00000008686	-	85	41.053	ENSHCOG00000019465	-	63	41.053
ENSHCOG00000008686	-	85	34.211	ENSHCOG00000003085	-	69	36.842
ENSHCOG00000008686	-	90	35.938	ENSHCOG00000019512	-	90	36.559
ENSHCOG00000008686	-	85	32.314	ENSHCOG00000014986	-	79	31.441
ENSHCOG00000008686	-	84	35.821	ENSHCOG00000007464	-	52	35.821
ENSHCOG00000008686	-	88	40.816	ENSHCOG00000007358	-	73	40.816
ENSHCOG00000008686	-	85	33.929	ENSHCOG00000007351	-	73	33.929
ENSHCOG00000008686	-	85	31.884	ENSHCOG00000008234	-	73	31.690
ENSHCOG00000008686	-	87	32.759	ENSHCOG00000014781	-	57	32.759
ENSHCOG00000008686	-	87	37.903	ENSHCOG00000010282	znf236	67	35.000
ENSHCOG00000008686	-	85	36.101	ENSHCOG00000001638	-	74	35.379
ENSHCOG00000008686	-	87	35.424	ENSHCOG00000001883	-	83	34.686
ENSHCOG00000008686	-	82	33.929	ENSHCOG00000008601	-	88	33.929
ENSHCOG00000008686	-	85	38.961	ENSHCOG00000015463	-	61	39.080
ENSHCOG00000008686	-	88	34.432	ENSHCOG00000020940	-	64	33.829
ENSHCOG00000008686	-	84	38.532	ENSHCOG00000001308	-	65	36.531
ENSHCOG00000008686	-	84	33.858	ENSHCOG00000020879	-	65	33.333
ENSHCOG00000008686	-	86	34.375	ENSHCOG00000019006	-	52	34.375
ENSHCOG00000008686	-	84	35.135	ENSHCOG00000013713	gfi1b	52	35.135
ENSHCOG00000008686	-	85	32.110	ENSHCOG00000015241	-	65	35.231
ENSHCOG00000008686	-	85	39.286	ENSHCOG00000007664	-	97	33.700
ENSHCOG00000008686	-	84	32.993	ENSHCOG00000000138	-	63	33.210
ENSHCOG00000008686	-	87	34.400	ENSHCOG00000013455	-	90	34.066
ENSHCOG00000008686	-	87	35.172	ENSHCOG00000008181	-	69	33.858
ENSHCOG00000008686	-	86	35.321	ENSHCOG00000015005	-	51	34.862
ENSHCOG00000008686	-	84	35.537	ENSHCOG00000011433	-	74	32.569
ENSHCOG00000008686	-	97	30.890	ENSHCOG00000011432	-	96	30.366
ENSHCOG00000008686	-	87	36.283	ENSHCOG00000012592	-	53	32.461
ENSHCOG00000008686	-	84	35.437	ENSHCOG00000013489	-	83	31.351
ENSHCOG00000008686	-	87	36.803	ENSHCOG00000021033	-	74	35.531
ENSHCOG00000008686	-	85	35.424	ENSHCOG00000015386	-	86	34.317
ENSHCOG00000008686	-	83	35.227	ENSHCOG00000020846	-	60	38.182
ENSHCOG00000008686	-	85	35.897	ENSHCOG00000020848	-	64	35.165
ENSHCOG00000008686	-	87	34.078	ENSHCOG00000017437	-	56	34.078
ENSHCOG00000008686	-	90	36.458	ENSHCOG00000001873	-	57	36.458
ENSHCOG00000008686	-	84	36.216	ENSHCOG00000019555	GFI1	52	36.216
ENSHCOG00000008686	-	93	32.787	ENSHCOG00000018201	-	88	32.215
ENSHCOG00000008686	-	83	32.773	ENSHCOG00000015010	-	62	32.370
ENSHCOG00000008686	-	87	32.192	ENSHCOG00000015639	znf319b	87	31.849
ENSHCOG00000008686	-	84	34.392	ENSHCOG00000001318	-	94	32.841
ENSHCOG00000008686	-	83	31.835	ENSHCOG00000000517	-	72	31.835
ENSHCOG00000008686	-	85	32.335	ENSHCOG00000000511	-	69	34.286
ENSHCOG00000008686	-	88	34.375	ENSHCOG00000015355	-	93	36.800
ENSHCOG00000008686	-	88	37.778	ENSHCOG00000001292	-	59	37.778
ENSHCOG00000008686	-	88	37.391	ENSHCOG00000015414	-	61	35.874
ENSHCOG00000008686	-	83	36.872	ENSHCOG00000020984	-	75	34.483
ENSHCOG00000008686	-	86	32.103	ENSHCOG00000001345	-	79	31.365
ENSHCOG00000008686	-	87	32.370	ENSHCOG00000012175	-	86	32.370
ENSHCOG00000008686	-	84	34.274	ENSHCOG00000001793	-	70	33.537
ENSHCOG00000008686	-	83	39.437	ENSHCOG00000009009	-	54	37.956
ENSHCOG00000008686	-	87	37.895	ENSHCOG00000007990	-	73	37.895
ENSHCOG00000008686	-	85	37.438	ENSHCOG00000008028	-	82	36.453
ENSHCOG00000008686	-	84	40.678	ENSHCOG00000021028	-	83	41.739
ENSHCOG00000008686	-	90	33.333	ENSHCOG00000014713	-	97	32.270
ENSHCOG00000008686	-	84	33.645	ENSHCOG00000020856	-	77	32.130
ENSHCOG00000008686	-	93	35.165	ENSHCOG00000015476	-	92	34.432
ENSHCOG00000008686	-	89	34.432	ENSHCOG00000008906	-	78	33.700
ENSHCOG00000008686	-	89	31.674	ENSHCOG00000019541	-	60	30.769
ENSHCOG00000008686	-	83	42.667	ENSHCOG00000014850	-	50	42.667
ENSHCOG00000008686	-	93	35.065	ENSHCOG00000015105	-	88	31.579
ENSHCOG00000008686	-	89	35.165	ENSHCOG00000020924	-	60	36.364
ENSHCOG00000008686	-	86	33.453	ENSHCOG00000021073	-	77	33.094
ENSHCOG00000008686	-	83	35.976	ENSHCOG00000007681	-	81	35.570
ENSHCOG00000008686	-	85	34.296	ENSHCOG00000012617	-	83	33.935
ENSHCOG00000008686	-	84	38.393	ENSHCOG00000020725	-	63	38.182
ENSHCOG00000008686	-	84	33.117	ENSHCOG00000016704	scrt1b	50	31.818
ENSHCOG00000008686	-	85	36.264	ENSHCOG00000015425	-	73	35.165
ENSHCOG00000008686	-	84	34.066	ENSHCOG00000019385	-	69	32.967
ENSHCOG00000008686	-	84	35.185	ENSHCOG00000019389	-	50	35.185
ENSHCOG00000008686	-	96	32.479	ENSHCOG00000000365	PRDM15	50	32.479
ENSHCOG00000008686	-	89	32.117	ENSHCOG00000015484	-	61	32.364
ENSHCOG00000008686	-	85	33.962	ENSHCOG00000000947	-	67	35.652
ENSHCOG00000008686	-	85	35.055	ENSHCOG00000001448	-	57	34.201
ENSHCOG00000008686	-	86	37.662	ENSHCOG00000020993	-	60	37.662
ENSHCOG00000008686	-	84	37.931	ENSHCOG00000001256	-	66	37.931
ENSHCOG00000008686	-	86	33.099	ENSHCOG00000001252	-	96	31.136
ENSHCOG00000008686	-	86	41.772	ENSHCOG00000015246	-	61	40.506
ENSHCOG00000008686	-	88	39.785	ENSHCOG00000019497	-	77	39.785
ENSHCOG00000008686	-	84	39.130	ENSHCOG00000015000	-	78	38.889
ENSHCOG00000008686	-	86	32.886	ENSHCOG00000006286	ZNF319	86	33.108
ENSHCOG00000008686	-	87	34.568	ENSHCOG00000008227	-	50	38.182
ENSHCOG00000008686	-	83	36.207	ENSHCOG00000018977	-	56	40.230
ENSHCOG00000008686	-	86	32.258	ENSHCOG00000015231	-	63	31.541
ENSHCOG00000008686	-	83	33.186	ENSHCOG00000017456	-	86	32.812
ENSHCOG00000008686	-	93	34.400	ENSHCOG00000003041	-	92	43.333
ENSHCOG00000008686	-	83	33.491	ENSHCOG00000008742	-	68	33.913

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000008686	-	86	32.870	FBgn0029928	CG3032	64	32.569	Drosophila_melanogaster
ENSHCOG00000008686	-	89	50.800	ENSGACG00000001166	-	100	52.962	Gasterosteus_aculeatus