EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000008855 (Gene tree)
Gene ID: 109518190
Gene Symbol: chd2
Alias: si:ch211-196l7.5
Full Name: chromodomain helicase DNA binding protein 2
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 17677 bases
Position: chrKV880028.1:300752-318428
Accession: 109518190
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000021729	ResIII	PF04851.15	1.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000002872	-	5136	XM_019873890	ENSHCOP00000021729	1711 (aa)	XP_019729449	-

Gene Model

Click here to download ENSHCOG00000008855's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000008855's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000008855	chd2	89	55.640	ENSHCOG00000014222	chd1	96	53.424
ENSHCOG00000008855	chd2	50	37.421	ENSHCOG00000014308	-	54	38.106

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000008855	chd2	98	66.376	ENSG00000173575	CHD2	87	97.959	Homo_sapiens
ENSHCOG00000008855	chd2	97	81.499	ENSAPOG00000008913	chd2	99	81.582	Acanthochromis_polyacanthus
ENSHCOG00000008855	chd2	94	82.066	ENSAOCG00000016332	chd2	94	82.826	Amphiprion_ocellaris
ENSHCOG00000008855	chd2	97	81.871	ENSAPEG00000016676	chd2	99	84.489	Amphiprion_percula
ENSHCOG00000008855	chd2	97	80.426	ENSATEG00000005246	chd2	99	80.756	Anabas_testudineus
ENSHCOG00000008855	chd2	95	69.099	ENSAPLG00000011141	-	90	85.714	Anas_platyrhynchos
ENSHCOG00000008855	chd2	95	67.055	ENSACAG00000000088	-	91	75.510	Anolis_carolinensis
ENSHCOG00000008855	chd2	98	67.070	ENSANAG00000024017	-	96	67.630	Aotus_nancymaae
ENSHCOG00000008855	chd2	97	80.012	ENSACLG00000021370	chd2	99	79.885	Astatotilapia_calliptera
ENSHCOG00000008855	chd2	95	70.552	ENSCJAG00000020444	-	88	70.859	Callithrix_jacchus
ENSHCOG00000008855	chd2	99	66.685	ENSCAFG00000010998	CHD2	96	68.909	Canis_familiaris
ENSHCOG00000008855	chd2	98	66.758	ENSCHIG00000022261	-	96	67.063	Capra_hircus
ENSHCOG00000008855	chd2	95	70.815	ENSTSYG00000003272	-	96	67.456	Carlito_syrichta
ENSHCOG00000008855	chd2	98	67.290	ENSCCAG00000035304	-	96	67.857	Cebus_capucinus
ENSHCOG00000008855	chd2	95	70.632	ENSCATG00000031069	-	95	63.939	Cercocebus_atys
ENSHCOG00000008855	chd2	95	70.570	ENSCSAG00000017007	-	88	70.815	Chlorocebus_sabaeus
ENSHCOG00000008855	chd2	73	80.179	ENSCHOG00000000608	-	75	80.276	Choloepus_hoffmanni
ENSHCOG00000008855	chd2	79	74.321	ENSCPBG00000018049	-	95	83.333	Chrysemys_picta_bellii
ENSHCOG00000008855	chd2	76	52.350	ENSCSAVG00000007580	-	99	51.679	Ciona_savignyi
ENSHCOG00000008855	chd2	95	70.570	ENSCANG00000038126	-	88	70.815	Colobus_angolensis_palliatus
ENSHCOG00000008855	chd2	98	67.125	ENSCGRG00001006649	Chd2	96	67.120	Cricetulus_griseus_chok1gshd
ENSHCOG00000008855	chd2	98	67.125	ENSCGRG00000018154	Chd2	96	67.120	Cricetulus_griseus_crigri
ENSHCOG00000008855	chd2	95	76.471	ENSCSEG00000003646	chd2	94	75.893	Cynoglossus_semilaevis
ENSHCOG00000008855	chd2	96	75.729	ENSCVAG00000002427	chd2	94	76.616	Cyprinodon_variegatus
ENSHCOG00000008855	chd2	94	76.623	ENSDARG00000060687	chd2	99	71.859	Danio_rerio
ENSHCOG00000008855	chd2	98	66.886	ENSDNOG00000009796	-	96	68.347	Dasypus_novemcinctus
ENSHCOG00000008855	chd2	50	73.404	ENSEBUG00000014994	chd2	83	73.913	Eptatretus_burgeri
ENSHCOG00000008855	chd2	92	85.714	ENSEASG00005015526	-	100	69.642	Equus_asinus_asinus
ENSHCOG00000008855	chd2	91	97.143	ENSELUG00000017981	chd2	99	75.890	Esox_lucius
ENSHCOG00000008855	chd2	99	66.812	ENSFDAG00000020651	-	96	68.045	Fukomys_damarensis
ENSHCOG00000008855	chd2	89	79.811	ENSFHEG00000002119	chd2	91	80.442	Fundulus_heteroclitus
ENSHCOG00000008855	chd2	93	75.478	ENSGMOG00000002890	chd2	98	75.592	Gadus_morhua
ENSHCOG00000008855	chd2	94	70.336	ENSGALG00000006949	CHD2	94	67.410	Gallus_gallus
ENSHCOG00000008855	chd2	99	81.027	ENSGAFG00000001905	chd2	99	81.834	Gambusia_affinis
ENSHCOG00000008855	chd2	92	78.891	ENSGACG00000013246	chd2	98	78.811	Gasterosteus_aculeatus
ENSHCOG00000008855	chd2	71	83.871	ENSGAGG00000013176	-	95	84.270	Gopherus_agassizii
ENSHCOG00000008855	chd2	99	64.597	ENSGGOG00000015677	CHD2	95	66.160	Gorilla_gorilla
ENSHCOG00000008855	chd2	94	83.291	ENSHBUG00000017947	chd2	99	80.058	Haplochromis_burtoni
ENSHCOG00000008855	chd2	99	66.594	ENSHGLG00000004435	CHD2	88	70.632	Heterocephalus_glaber_female
ENSHCOG00000008855	chd2	99	66.211	ENSHGLG00100016376	-	88	70.202	Heterocephalus_glaber_male
ENSHCOG00000008855	chd2	98	72.043	ENSIPUG00000000488	chd2	98	72.125	Ictalurus_punctatus
ENSHCOG00000008855	chd2	95	70.815	ENSSTOG00000001270	-	90	85.714	Ictidomys_tridecemlineatus
ENSHCOG00000008855	chd2	96	70.429	ENSJJAG00000000213	Chd2	88	70.675	Jaculus_jaculus
ENSHCOG00000008855	chd2	84	80.991	ENSKMAG00000015849	chd2	99	81.794	Kryptolebias_marmoratus
ENSHCOG00000008855	chd2	72	71.277	ENSLAFG00000016885	-	98	80.207	Loxodonta_africana
ENSHCOG00000008855	chd2	98	66.321	ENSMFAG00000033343	-	96	66.967	Macaca_fascicularis
ENSHCOG00000008855	chd2	98	66.321	ENSMMUG00000011782	-	96	66.967	Macaca_mulatta
ENSHCOG00000008855	chd2	98	66.085	ENSMNEG00000036875	-	96	66.723	Macaca_nemestrina
ENSHCOG00000008855	chd2	95	70.570	ENSMLEG00000035026	-	88	70.815	Mandrillus_leucophaeus
ENSHCOG00000008855	chd2	97	79.885	ENSMAMG00000009082	chd2	99	79.965	Mastacembelus_armatus
ENSHCOG00000008855	chd2	97	80.012	ENSMZEG00005021333	chd2	99	79.885	Maylandia_zebra
ENSHCOG00000008855	chd2	94	70.230	ENSMGAG00000008966	-	96	67.558	Meleagris_gallopavo
ENSHCOG00000008855	chd2	99	66.303	ENSMICG00000000332	-	96	66.780	Microcebus_murinus
ENSHCOG00000008855	chd2	98	66.703	ENSMOCG00000015124	Chd2	96	67.819	Microtus_ochrogaster
ENSHCOG00000008855	chd2	98	67.050	ENSMODG00000013158	-	96	67.081	Monodelphis_domestica
ENSHCOG00000008855	chd2	97	79.620	ENSMALG00000007755	chd2	99	80.600	Monopterus_albus
ENSHCOG00000008855	chd2	98	67.126	MGP_CAROLIEiJ_G0029860	Chd2	98	68.030	Mus_caroli
ENSHCOG00000008855	chd2	99	66.739	ENSMUSG00000078671	Chd2	98	67.914	Mus_musculus
ENSHCOG00000008855	chd2	98	67.162	MGP_PahariEiJ_G0013082	Chd2	96	68.236	Mus_pahari
ENSHCOG00000008855	chd2	98	67.015	MGP_SPRETEiJ_G0030962	Chd2	98	67.914	Mus_spretus
ENSHCOG00000008855	chd2	99	66.415	ENSMLUG00000009292	-	96	68.074	Myotis_lucifugus
ENSHCOG00000008855	chd2	95	70.552	ENSNGAG00000010792	Chd2	96	67.231	Nannospalax_galili
ENSHCOG00000008855	chd2	97	80.114	ENSNBRG00000020591	chd2	99	80.787	Neolamprologus_brichardi
ENSHCOG00000008855	chd2	98	64.664	ENSNLEG00000012349	-	94	66.364	Nomascus_leucogenys
ENSHCOG00000008855	chd2	68	77.237	ENSMEUG00000001522	-	66	85.714	Notamacropus_eugenii
ENSHCOG00000008855	chd2	99	66.120	ENSODEG00000016028	-	90	80.952	Octodon_degus
ENSHCOG00000008855	chd2	94	82.913	ENSONIG00000015136	chd2	94	83.859	Oreochromis_niloticus
ENSHCOG00000008855	chd2	87	65.324	ENSOANG00000004385	-	99	65.898	Ornithorhynchus_anatinus
ENSHCOG00000008855	chd2	98	62.645	ENSOCUG00000001628	-	92	72.765	Oryctolagus_cuniculus
ENSHCOG00000008855	chd2	92	86.000	ENSORLG00000008403	chd2	99	78.599	Oryzias_latipes
ENSHCOG00000008855	chd2	92	85.417	ENSORLG00020004138	chd2	93	82.724	Oryzias_latipes_hni
ENSHCOG00000008855	chd2	96	77.475	ENSOMEG00000005831	chd2	93	77.602	Oryzias_melastigma
ENSHCOG00000008855	chd2	95	68.486	ENSOGAG00000010399	-	90	85.714	Otolemur_garnettii
ENSHCOG00000008855	chd2	98	68.027	ENSOARG00000010343	-	95	69.023	Ovis_aries
ENSHCOG00000008855	chd2	99	64.954	ENSPPAG00000030381	-	95	66.027	Pan_paniscus
ENSHCOG00000008855	chd2	98	66.430	ENSPTRG00000007478	CHD2	96	67.079	Pan_troglodytes
ENSHCOG00000008855	chd2	95	67.566	ENSPANG00000033355	-	95	61.907	Papio_anubis
ENSHCOG00000008855	chd2	99	73.918	ENSPKIG00000000495	chd2	98	74.374	Paramormyrops_kingsleyae
ENSHCOG00000008855	chd2	85	79.324	ENSPMGG00000009941	chd2	99	80.040	Periophthalmus_magnuspinnatus
ENSHCOG00000008855	chd2	98	67.070	ENSPEMG00000019507	Chd2	96	68.141	Peromyscus_maniculatus_bairdii
ENSHCOG00000008855	chd2	89	70.982	ENSPCIG00000009417	-	99	73.770	Phascolarctos_cinereus
ENSHCOG00000008855	chd2	94	84.038	ENSPFOG00000007050	chd2	94	83.733	Poecilia_formosa
ENSHCOG00000008855	chd2	94	84.048	ENSPLAG00000005067	chd2	94	83.796	Poecilia_latipinna
ENSHCOG00000008855	chd2	97	81.153	ENSPMEG00000019628	chd2	99	80.416	Poecilia_mexicana
ENSHCOG00000008855	chd2	98	65.175	ENSPPYG00000006799	-	95	65.785	Pongo_abelii
ENSHCOG00000008855	chd2	95	70.570	ENSPCOG00000028084	-	90	85.714	Propithecus_coquereli
ENSHCOG00000008855	chd2	97	79.942	ENSPNYG00000010273	chd2	99	79.827	Pundamilia_nyererei
ENSHCOG00000008855	chd2	95	73.749	ENSPNAG00000016719	chd2	96	73.337	Pygocentrus_nattereri
ENSHCOG00000008855	chd2	99	66.958	ENSRNOG00000012716	Chd2	96	68.084	Rattus_norvegicus
ENSHCOG00000008855	chd2	95	69.563	ENSRBIG00000036875	-	88	69.809	Rhinopithecus_bieti
ENSHCOG00000008855	chd2	95	70.632	ENSRROG00000041087	-	88	70.877	Rhinopithecus_roxellana
ENSHCOG00000008855	chd2	95	70.675	ENSSBOG00000023754	-	88	70.920	Saimiri_boliviensis_boliviensis
ENSHCOG00000008855	chd2	97	67.592	ENSSHAG00000012513	-	96	67.194	Sarcophilus_harrisii
ENSHCOG00000008855	chd2	96	77.307	ENSSFOG00015023759	chd2	99	72.657	Scleropages_formosus
ENSHCOG00000008855	chd2	98	82.735	ENSSMAG00000001726	chd2	99	83.239	Scophthalmus_maximus
ENSHCOG00000008855	chd2	97	81.167	ENSSLDG00000001146	chd2	99	81.823	Seriola_lalandi_dorsalis
ENSHCOG00000008855	chd2	69	82.000	ENSSARG00000014112	-	67	82.109	Sorex_araneus
ENSHCOG00000008855	chd2	98	65.992	ENSSPUG00000011266	-	95	67.893	Sphenodon_punctatus
ENSHCOG00000008855	chd2	97	80.892	ENSSPAG00000016452	chd2	99	81.714	Stegastes_partitus
ENSHCOG00000008855	chd2	89	70.386	ENSSSCG00000002266	-	100	70.901	Sus_scrofa
ENSHCOG00000008855	chd2	96	66.779	ENSTGUG00000008540	-	96	67.896	Taeniopygia_guttata
ENSHCOG00000008855	chd2	81	80.645	ENSTRUG00000008842	chd2	91	72.954	Takifugu_rubripes
ENSHCOG00000008855	chd2	83	85.651	ENSTNIG00000010760	chd2	99	85.663	Tetraodon_nigroviridis
ENSHCOG00000008855	chd2	67	65.132	ENSTBEG00000017730	-	72	85.714	Tupaia_belangeri
ENSHCOG00000008855	chd2	86	92.308	ENSTTRG00000000430	-	85	92.308	Tursiops_truncatus
ENSHCOG00000008855	chd2	80	87.978	ENSVPAG00000009645	-	81	87.978	Vicugna_pacos
ENSHCOG00000008855	chd2	95	79.137	ENSXCOG00000020255	chd2	100	78.914	Xiphophorus_couchianus
ENSHCOG00000008855	chd2	99	79.819	ENSXMAG00000002707	chd2	99	80.497	Xiphophorus_maculatus