EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000008866 (Gene tree)
Gene ID: 109512937
Gene Symbol: ythdf1
Alias: fb49c02|wu:fb49c02|wu:fi19h06|wu:fj87f09|wu:fp06c11|zgc:55657
Full Name: YTH domain-containing family protein 1-like
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 11645 bases
Position: chrKV879835.1:959139-970783
Accession: 109512937
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000006986	YTH	PF04146.15	2.2e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000002763	-	3676	XM_019865046	ENSHCOP00000006986	598 (aa)	XP_019720605	UPI00094E955F

Gene Model

Click here to download ENSHCOG00000008866's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000008866's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000008866	ythdf1	99	74.215	ENSHCOG00000011303	YTHDF1	99	73.404
ENSHCOG00000008866	ythdf1	98	55.145	ENSHCOG00000015814	ythdf2	96	55.255
ENSHCOG00000008866	ythdf1	96	55.207	ENSHCOG00000015277	ythdf3	96	55.665

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000008866	ythdf1	98	71.404	ENSG00000149658	YTHDF1	99	70.785	Homo_sapiens
ENSHCOG00000008866	ythdf1	99	76.230	ENSAPOG00000010796	YTHDF1	99	75.333	Acanthochromis_polyacanthus
ENSHCOG00000008866	ythdf1	97	85.254	ENSAPOG00000004358	ythdf1	97	88.206	Acanthochromis_polyacanthus
ENSHCOG00000008866	ythdf1	97	73.810	ENSACIG00000020083	YTHDF1	99	74.667	Amphilophus_citrinellus
ENSHCOG00000008866	ythdf1	97	79.664	ENSACIG00000011264	ythdf1	98	79.736	Amphilophus_citrinellus
ENSHCOG00000008866	ythdf1	100	87.438	ENSAOCG00000022251	ythdf1	100	88.595	Amphiprion_ocellaris
ENSHCOG00000008866	ythdf1	99	76.066	ENSAOCG00000012567	YTHDF1	99	73.841	Amphiprion_ocellaris
ENSHCOG00000008866	ythdf1	97	87.267	ENSAPEG00000021878	ythdf1	97	88.519	Amphiprion_percula
ENSHCOG00000008866	ythdf1	99	76.230	ENSAPEG00000008750	YTHDF1	99	74.007	Amphiprion_percula
ENSHCOG00000008866	ythdf1	97	86.757	ENSATEG00000023840	ythdf1	97	87.354	Anabas_testudineus
ENSHCOG00000008866	ythdf1	99	76.112	ENSATEG00000005996	YTHDF1	99	74.833	Anabas_testudineus
ENSHCOG00000008866	ythdf1	96	71.527	ENSAPLG00000005985	YTHDF1	98	72.081	Anas_platyrhynchos
ENSHCOG00000008866	ythdf1	98	71.453	ENSACAG00000005560	YTHDF1	99	72.000	Anolis_carolinensis
ENSHCOG00000008866	ythdf1	99	59.365	ENSANAG00000021022	-	99	59.766	Aotus_nancymaae
ENSHCOG00000008866	ythdf1	98	70.968	ENSANAG00000034786	-	99	70.618	Aotus_nancymaae
ENSHCOG00000008866	ythdf1	99	75.000	ENSACLG00000025518	YTHDF1	99	73.344	Astatotilapia_calliptera
ENSHCOG00000008866	ythdf1	97	69.558	ENSBTAG00000010383	YTHDF1	99	70.167	Bos_taurus
ENSHCOG00000008866	ythdf1	98	70.389	ENSCJAG00000010056	YTHDF1	99	69.767	Callithrix_jacchus
ENSHCOG00000008866	ythdf1	97	69.521	ENSCHIG00000026494	YTHDF1	99	70.284	Capra_hircus
ENSHCOG00000008866	ythdf1	94	71.303	ENSTSYG00000033436	YTHDF1	97	71.675	Carlito_syrichta
ENSHCOG00000008866	ythdf1	98	70.728	ENSCATG00000033272	YTHDF1	99	70.952	Cercocebus_atys
ENSHCOG00000008866	ythdf1	98	69.882	ENSCLAG00000005989	YTHDF1	99	70.618	Chinchilla_lanigera
ENSHCOG00000008866	ythdf1	98	70.728	ENSCSAG00000016266	YTHDF1	99	70.952	Chlorocebus_sabaeus
ENSHCOG00000008866	ythdf1	98	72.175	ENSCPBG00000027183	YTHDF1	99	71.215	Chrysemys_picta_bellii
ENSHCOG00000008866	ythdf1	96	71.012	ENSCANG00000029082	YTHDF1	97	71.404	Colobus_angolensis_palliatus
ENSHCOG00000008866	ythdf1	99	70.549	ENSCGRG00001016568	Ythdf1	99	70.833	Cricetulus_griseus_chok1gshd
ENSHCOG00000008866	ythdf1	96	70.812	ENSCGRG00000009207	Ythdf1	99	70.847	Cricetulus_griseus_crigri
ENSHCOG00000008866	ythdf1	97	81.741	ENSCSEG00000020623	YTHDF1	99	82.776	Cynoglossus_semilaevis
ENSHCOG00000008866	ythdf1	99	75.707	ENSCVAG00000014378	YTHDF1	99	75.475	Cyprinodon_variegatus
ENSHCOG00000008866	ythdf1	99	85.810	ENSCVAG00000017940	ythdf1	97	85.810	Cyprinodon_variegatus
ENSHCOG00000008866	ythdf1	99	81.758	ENSDARG00000016447	ythdf1	97	82.090	Danio_rerio
ENSHCOG00000008866	ythdf1	98	70.270	ENSDNOG00000043590	YTHDF1	99	70.618	Dasypus_novemcinctus
ENSHCOG00000008866	ythdf1	92	51.899	ENSETEG00000017860	-	99	51.515	Echinops_telfairi
ENSHCOG00000008866	ythdf1	89	70.074	ENSEEUG00000007461	YTHDF1	99	70.128	Erinaceus_europaeus
ENSHCOG00000008866	ythdf1	99	71.725	ENSELUG00000001906	YTHDF1	99	74.240	Esox_lucius
ENSHCOG00000008866	ythdf1	99	81.126	ENSELUG00000022768	ythdf1	96	83.416	Esox_lucius
ENSHCOG00000008866	ythdf1	98	71.669	ENSFALG00000010463	YTHDF1	99	71.215	Ficedula_albicollis
ENSHCOG00000008866	ythdf1	98	70.051	ENSFDAG00000019602	YTHDF1	99	69.449	Fukomys_damarensis
ENSHCOG00000008866	ythdf1	99	76.277	ENSFHEG00000002540	YTHDF1	99	76.166	Fundulus_heteroclitus
ENSHCOG00000008866	ythdf1	99	85.810	ENSFHEG00000023218	ythdf1	97	85.810	Fundulus_heteroclitus
ENSHCOG00000008866	ythdf1	99	80.301	ENSGMOG00000019610	ythdf1	96	79.967	Gadus_morhua
ENSHCOG00000008866	ythdf1	98	71.404	ENSGALG00000005745	YTHDF1	99	71.953	Gallus_gallus
ENSHCOG00000008866	ythdf1	99	76.112	ENSGAFG00000021100	YTHDF1	99	76.490	Gambusia_affinis
ENSHCOG00000008866	ythdf1	97	86.644	ENSGACG00000012014	ythdf1	96	86.242	Gasterosteus_aculeatus
ENSHCOG00000008866	ythdf1	99	74.673	ENSGACG00000002613	YTHDF1	99	74.026	Gasterosteus_aculeatus
ENSHCOG00000008866	ythdf1	98	72.175	ENSGAGG00000003007	YTHDF1	99	71.381	Gopherus_agassizii
ENSHCOG00000008866	ythdf1	98	71.669	ENSGGOG00000008340	YTHDF1	99	70.785	Gorilla_gorilla
ENSHCOG00000008866	ythdf1	99	74.837	ENSHBUG00000004875	YTHDF1	99	73.179	Haplochromis_burtoni
ENSHCOG00000008866	ythdf1	97	87.223	ENSHBUG00000011284	ythdf1	99	84.185	Haplochromis_burtoni
ENSHCOG00000008866	ythdf1	98	70.389	ENSHGLG00000006585	YTHDF1	99	69.950	Heterocephalus_glaber_female
ENSHCOG00000008866	ythdf1	98	70.389	ENSHGLG00100004683	YTHDF1	99	69.950	Heterocephalus_glaber_male
ENSHCOG00000008866	ythdf1	99	76.238	ENSIPUG00000000425	Ythdf1	97	77.705	Ictalurus_punctatus
ENSHCOG00000008866	ythdf1	96	70.415	ENSJJAG00000013589	Ythdf1	99	70.628	Jaculus_jaculus
ENSHCOG00000008866	ythdf1	99	75.327	ENSKMAG00000017472	YTHDF1	99	75.129	Kryptolebias_marmoratus
ENSHCOG00000008866	ythdf1	97	84.497	ENSKMAG00000005595	ythdf1	97	84.641	Kryptolebias_marmoratus
ENSHCOG00000008866	ythdf1	99	75.618	ENSLBEG00000012068	YTHDF1	99	74.667	Labrus_bergylta
ENSHCOG00000008866	ythdf1	97	86.371	ENSLBEG00000014105	ythdf1	97	87.813	Labrus_bergylta
ENSHCOG00000008866	ythdf1	96	71.875	ENSLACG00000014195	YTHDF1	98	72.049	Latimeria_chalumnae
ENSHCOG00000008866	ythdf1	99	72.727	ENSLOCG00000005020	ythdf1	96	72.982	Lepisosteus_oculatus
ENSHCOG00000008866	ythdf1	98	71.138	ENSLAFG00000008884	YTHDF1	99	71.000	Loxodonta_africana
ENSHCOG00000008866	ythdf1	98	70.728	ENSMFAG00000042868	YTHDF1	99	70.952	Macaca_fascicularis
ENSHCOG00000008866	ythdf1	98	70.728	ENSMMUG00000009227	YTHDF1	99	70.952	Macaca_mulatta
ENSHCOG00000008866	ythdf1	98	70.728	ENSMNEG00000030851	YTHDF1	99	70.952	Macaca_nemestrina
ENSHCOG00000008866	ythdf1	98	71.066	ENSMLEG00000009252	YTHDF1	99	71.307	Mandrillus_leucophaeus
ENSHCOG00000008866	ythdf1	99	75.410	ENSMAMG00000011072	YTHDF1	99	74.500	Mastacembelus_armatus
ENSHCOG00000008866	ythdf1	97	85.399	ENSMAMG00000024255	ythdf1	97	85.691	Mastacembelus_armatus
ENSHCOG00000008866	ythdf1	99	74.837	ENSMZEG00005023596	YTHDF1	99	73.179	Maylandia_zebra
ENSHCOG00000008866	ythdf1	97	87.223	ENSMZEG00005026397	ythdf1	97	87.479	Maylandia_zebra
ENSHCOG00000008866	ythdf1	97	70.628	ENSMGAG00000006139	YTHDF1	98	71.912	Meleagris_gallopavo
ENSHCOG00000008866	ythdf1	98	70.918	ENSMAUG00000017660	Ythdf1	99	70.952	Mesocricetus_auratus
ENSHCOG00000008866	ythdf1	98	69.949	ENSMICG00000032266	YTHDF1	99	70.785	Microcebus_murinus
ENSHCOG00000008866	ythdf1	98	71.088	ENSMOCG00000013573	Ythdf1	99	71.119	Microtus_ochrogaster
ENSHCOG00000008866	ythdf1	99	76.717	ENSMMOG00000020467	YTHDF1	96	75.833	Mola_mola
ENSHCOG00000008866	ythdf1	97	85.569	ENSMMOG00000017500	ythdf1	97	85.358	Mola_mola
ENSHCOG00000008866	ythdf1	88	72.128	ENSMODG00000016842	YTHDF1	99	72.140	Monodelphis_domestica
ENSHCOG00000008866	ythdf1	97	86.633	ENSMALG00000015672	ythdf1	97	85.240	Monopterus_albus
ENSHCOG00000008866	ythdf1	99	75.249	ENSMALG00000022209	YTHDF1	99	72.578	Monopterus_albus
ENSHCOG00000008866	ythdf1	98	71.259	MGP_CAROLIEiJ_G0024790	Ythdf1	99	71.119	Mus_caroli
ENSHCOG00000008866	ythdf1	98	71.259	ENSMUSG00000038848	Ythdf1	99	71.119	Mus_musculus
ENSHCOG00000008866	ythdf1	98	71.259	MGP_PahariEiJ_G0026237	Ythdf1	99	71.119	Mus_pahari
ENSHCOG00000008866	ythdf1	98	71.259	MGP_SPRETEiJ_G0025715	Ythdf1	99	71.119	Mus_spretus
ENSHCOG00000008866	ythdf1	88	66.604	ENSMPUG00000008111	YTHDF1	99	68.140	Mustela_putorius_furo
ENSHCOG00000008866	ythdf1	96	70.588	ENSMLUG00000002241	YTHDF1	96	71.157	Myotis_lucifugus
ENSHCOG00000008866	ythdf1	98	70.389	ENSNGAG00000000334	Ythdf1	99	71.452	Nannospalax_galili
ENSHCOG00000008866	ythdf1	97	74.875	ENSNBRG00000015321	YTHDF1	99	75.874	Neolamprologus_brichardi
ENSHCOG00000008866	ythdf1	97	88.075	ENSNBRG00000008213	ythdf1	98	87.980	Neolamprologus_brichardi
ENSHCOG00000008866	ythdf1	94	65.961	ENSOPRG00000001758	-	99	65.841	Ochotona_princeps
ENSHCOG00000008866	ythdf1	87	75.336	ENSODEG00000000074	-	99	58.375	Octodon_degus
ENSHCOG00000008866	ythdf1	97	86.371	ENSONIG00000016799	ythdf1	99	86.213	Oreochromis_niloticus
ENSHCOG00000008866	ythdf1	98	71.743	ENSOANG00000003723	YTHDF1	99	72.287	Ornithorhynchus_anatinus
ENSHCOG00000008866	ythdf1	99	75.042	ENSORLG00000009739	YTHDF1	99	75.130	Oryzias_latipes
ENSHCOG00000008866	ythdf1	97	83.362	ENSORLG00000014665	YTHDF1	97	84.193	Oryzias_latipes
ENSHCOG00000008866	ythdf1	97	84.014	ENSORLG00020000307	ythdf1	97	84.833	Oryzias_latipes_hni
ENSHCOG00000008866	ythdf1	99	75.167	ENSORLG00020001332	YTHDF1	99	75.868	Oryzias_latipes_hni
ENSHCOG00000008866	ythdf1	97	83.844	ENSORLG00015006302	ythdf1	97	84.667	Oryzias_latipes_hsok
ENSHCOG00000008866	ythdf1	99	74.709	ENSORLG00015018321	YTHDF1	99	74.784	Oryzias_latipes_hsok
ENSHCOG00000008866	ythdf1	97	85.641	ENSOMEG00000002941	YTHDF1	97	84.925	Oryzias_melastigma
ENSHCOG00000008866	ythdf1	99	75.618	ENSOMEG00000011843	YTHDF1	96	75.374	Oryzias_melastigma
ENSHCOG00000008866	ythdf1	98	68.761	ENSOGAG00000000480	YTHDF1	99	69.667	Otolemur_garnettii
ENSHCOG00000008866	ythdf1	96	67.071	ENSOARG00000011639	YTHDF1	88	87.692	Ovis_aries
ENSHCOG00000008866	ythdf1	98	71.669	ENSPPAG00000023277	YTHDF1	99	70.897	Pan_paniscus
ENSHCOG00000008866	ythdf1	78	81.081	ENSPTIG00000017355	YTHDF1	96	79.325	Panthera_tigris_altaica
ENSHCOG00000008866	ythdf1	98	71.669	ENSPTRG00000013730	YTHDF1	99	70.785	Pan_troglodytes
ENSHCOG00000008866	ythdf1	98	70.728	ENSPANG00000021472	YTHDF1	99	70.952	Papio_anubis
ENSHCOG00000008866	ythdf1	99	72.483	ENSPKIG00000005026	YTHDF1	98	71.096	Paramormyrops_kingsleyae
ENSHCOG00000008866	ythdf1	98	71.453	ENSPSIG00000005529	YTHDF1	97	71.817	Pelodiscus_sinensis
ENSHCOG00000008866	ythdf1	94	86.316	ENSPMGG00000015328	ythdf1	98	86.082	Periophthalmus_magnuspinnatus
ENSHCOG00000008866	ythdf1	94	77.178	ENSPMGG00000009101	YTHDF1	99	77.381	Periophthalmus_magnuspinnatus
ENSHCOG00000008866	ythdf1	96	72.174	ENSPEMG00000020199	Ythdf1	99	71.652	Peromyscus_maniculatus_bairdii
ENSHCOG00000008866	ythdf1	99	72.437	ENSPCIG00000017170	YTHDF1	99	72.325	Phascolarctos_cinereus
ENSHCOG00000008866	ythdf1	99	85.309	ENSPFOG00000005405	ythdf1	97	85.309	Poecilia_formosa
ENSHCOG00000008866	ythdf1	99	85.309	ENSPLAG00000006653	ythdf1	97	85.309	Poecilia_latipinna
ENSHCOG00000008866	ythdf1	99	76.112	ENSPLAG00000006298	YTHDF1	96	76.539	Poecilia_latipinna
ENSHCOG00000008866	ythdf1	99	76.112	ENSPMEG00000020969	-	96	76.539	Poecilia_mexicana
ENSHCOG00000008866	ythdf1	100	84.603	ENSPMEG00000023753	ythdf1	100	85.265	Poecilia_mexicana
ENSHCOG00000008866	ythdf1	100	85.738	ENSPREG00000002173	ythdf1	100	85.738	Poecilia_reticulata
ENSHCOG00000008866	ythdf1	96	76.451	ENSPREG00000017662	YTHDF1	95	76.684	Poecilia_reticulata
ENSHCOG00000008866	ythdf1	78	90.761	ENSPPYG00000011226	YTHDF1	99	90.256	Pongo_abelii
ENSHCOG00000008866	ythdf1	89	68.598	ENSPCAG00000002452	YTHDF1	100	68.681	Procavia_capensis
ENSHCOG00000008866	ythdf1	98	70.119	ENSPCOG00000025969	YTHDF1	99	71.119	Propithecus_coquereli
ENSHCOG00000008866	ythdf1	97	87.223	ENSPNYG00000014007	ythdf1	99	85.117	Pundamilia_nyererei
ENSHCOG00000008866	ythdf1	99	74.837	ENSPNYG00000002266	YTHDF1	99	73.179	Pundamilia_nyererei
ENSHCOG00000008866	ythdf1	99	80.366	ENSPNAG00000012447	ythdf1	97	81.364	Pygocentrus_nattereri
ENSHCOG00000008866	ythdf1	98	71.259	ENSRNOG00000027015	Ythdf1	99	71.119	Rattus_norvegicus
ENSHCOG00000008866	ythdf1	98	69.882	ENSRBIG00000044959	YTHDF1	99	70.117	Rhinopithecus_bieti
ENSHCOG00000008866	ythdf1	98	69.882	ENSRROG00000033014	YTHDF1	99	70.117	Rhinopithecus_roxellana
ENSHCOG00000008866	ythdf1	94	70.000	ENSSBOG00000027278	YTHDF1	99	68.508	Saimiri_boliviensis_boliviensis
ENSHCOG00000008866	ythdf1	96	71.799	ENSSHAG00000010430	YTHDF1	87	72.666	Sarcophilus_harrisii
ENSHCOG00000008866	ythdf1	99	75.084	ENSSFOG00015000284	ythdf1	99	74.141	Scleropages_formosus
ENSHCOG00000008866	ythdf1	71	94.904	ENSSMAG00000013715	ythdf1	95	94.048	Scophthalmus_maximus
ENSHCOG00000008866	ythdf1	99	76.047	ENSSMAG00000007635	YTHDF1	95	75.500	Scophthalmus_maximus
ENSHCOG00000008866	ythdf1	99	73.802	ENSSDUG00000015823	YTHDF1	97	75.685	Seriola_dumerili
ENSHCOG00000008866	ythdf1	97	88.136	ENSSDUG00000000435	ythdf1	97	87.542	Seriola_dumerili
ENSHCOG00000008866	ythdf1	99	74.516	ENSSLDG00000001054	YTHDF1	92	93.846	Seriola_lalandi_dorsalis
ENSHCOG00000008866	ythdf1	97	88.156	ENSSLDG00000024948	ythdf1	97	87.728	Seriola_lalandi_dorsalis
ENSHCOG00000008866	ythdf1	97	85.738	ENSSPAG00000014989	ythdf1	97	87.007	Stegastes_partitus
ENSHCOG00000008866	ythdf1	99	74.513	ENSSPAG00000003666	YTHDF1	99	73.554	Stegastes_partitus
ENSHCOG00000008866	ythdf1	96	71.355	ENSTGUG00000007565	YTHDF1	99	72.081	Taeniopygia_guttata
ENSHCOG00000008866	ythdf1	97	74.664	ENSTRUG00000005049	YTHDF1	99	74.426	Takifugu_rubripes
ENSHCOG00000008866	ythdf1	100	87.458	ENSTRUG00000004288	ythdf1	100	86.120	Takifugu_rubripes
ENSHCOG00000008866	ythdf1	99	80.602	ENSTNIG00000012490	ythdf1	99	81.104	Tetraodon_nigroviridis
ENSHCOG00000008866	ythdf1	97	72.432	ENSTNIG00000003975	YTHDF1	99	71.761	Tetraodon_nigroviridis
ENSHCOG00000008866	ythdf1	96	71.111	ENSXETG00000027086	ythdf1	96	71.945	Xenopus_tropicalis
ENSHCOG00000008866	ythdf1	97	83.562	ENSXCOG00000002490	ythdf1	96	83.562	Xiphophorus_couchianus
ENSHCOG00000008866	ythdf1	96	76.451	ENSXCOG00000008115	YTHDF1	96	76.897	Xiphophorus_couchianus
ENSHCOG00000008866	ythdf1	99	84.783	ENSXMAG00000008525	ythdf1	97	84.950	Xiphophorus_maculatus
ENSHCOG00000008866	ythdf1	99	75.947	ENSXMAG00000015644	YTHDF1	99	75.475	Xiphophorus_maculatus