EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000008904 (Gene tree)
Gene ID: 109518338
Gene Symbol: -
Alias: -
Full Name: serrate RNA effector molecule homolog
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 6143 bases
Position: chrKV879710.1:140231-146373
Accession: 109518338
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000007017	ARS2	PF04959.13	4.2e-78	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000002707	-	3284	XM_019874104	ENSHCOP00000007017	790 (aa)	XP_019729663	-

Gene Model

Click here to download ENSHCOG00000008904's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000008904's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000008904	-	97	56.288	ENSHCOG00000005403	srrt	92	56.338

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000008904	-	56	61.242	ENSG00000087087	SRRT	96	62.222	Homo_sapiens
ENSHCOG00000008904	-	90	61.207	ENSAPOG00000002304	srrt	93	54.591	Acanthochromis_polyacanthus
ENSHCOG00000008904	-	82	61.472	ENSAMEG00000014506	SRRT	92	50.845	Ailuropoda_melanoleuca
ENSHCOG00000008904	-	94	56.996	ENSACIG00000015795	srrt	92	57.143	Amphilophus_citrinellus
ENSHCOG00000008904	-	88	63.053	ENSAOCG00000009693	srrt	92	55.848	Amphiprion_ocellaris
ENSHCOG00000008904	-	93	70.610	ENSAOCG00000009189	-	93	72.354	Amphiprion_ocellaris
ENSHCOG00000008904	-	89	62.832	ENSAPEG00000003646	srrt	92	55.968	Amphiprion_percula
ENSHCOG00000008904	-	93	70.610	ENSAPEG00000020016	-	93	72.354	Amphiprion_percula
ENSHCOG00000008904	-	60	73.062	ENSATEG00000003652	-	96	74.854	Anabas_testudineus
ENSHCOG00000008904	-	89	62.775	ENSATEG00000014425	srrt	93	54.590	Anabas_testudineus
ENSHCOG00000008904	-	55	60.486	ENSACAG00000001014	SRRT	93	51.171	Anolis_carolinensis
ENSHCOG00000008904	-	56	60.722	ENSANAG00000031718	SRRT	93	52.323	Aotus_nancymaae
ENSHCOG00000008904	-	97	71.294	ENSACLG00000009423	-	98	72.471	Astatotilapia_calliptera
ENSHCOG00000008904	-	90	63.053	ENSACLG00000013156	srrt	89	53.922	Astatotilapia_calliptera
ENSHCOG00000008904	-	54	62.889	ENSAMXG00000016671	srrt	89	53.250	Astyanax_mexicanus
ENSHCOG00000008904	-	56	61.017	ENSBTAG00000001134	SRRT	93	51.404	Bos_taurus
ENSHCOG00000008904	-	71	37.605	WBGene00017085	E01A2.2	85	38.641	Caenorhabditis_elegans
ENSHCOG00000008904	-	56	60.934	ENSCJAG00000014917	SRRT	93	52.025	Callithrix_jacchus
ENSHCOG00000008904	-	95	52.426	ENSCAFG00000023538	SRRT	93	51.404	Canis_familiaris
ENSHCOG00000008904	-	97	51.953	ENSCAFG00020013358	SRRT	97	50.866	Canis_lupus_dingo
ENSHCOG00000008904	-	56	61.325	ENSCHIG00000010495	SRRT	93	51.404	Capra_hircus
ENSHCOG00000008904	-	56	61.242	ENSTSYG00000036426	SRRT	97	51.355	Carlito_syrichta
ENSHCOG00000008904	-	56	61.388	ENSCAPG00000013586	SRRT	97	52.363	Cavia_aperea
ENSHCOG00000008904	-	56	60.593	ENSCPOG00000001739	SRRT	93	51.463	Cavia_porcellus
ENSHCOG00000008904	-	56	60.722	ENSCCAG00000015877	SRRT	93	52.270	Cebus_capucinus
ENSHCOG00000008904	-	56	61.242	ENSCATG00000036306	SRRT	94	51.384	Cercocebus_atys
ENSHCOG00000008904	-	95	52.842	ENSCLAG00000007568	SRRT	90	57.294	Chinchilla_lanigera
ENSHCOG00000008904	-	56	60.722	ENSCSAG00000017996	SRRT	93	52.083	Chlorocebus_sabaeus
ENSHCOG00000008904	-	55	58.394	ENSCHOG00000007815	SRRT	66	55.696	Choloepus_hoffmanni
ENSHCOG00000008904	-	73	58.447	ENSCPBG00000011553	SRRT	75	56.311	Chrysemys_picta_bellii
ENSHCOG00000008904	-	95	44.821	ENSCING00000003506	-	69	47.890	Ciona_intestinalis
ENSHCOG00000008904	-	100	41.696	ENSCSAVG00000008394	-	97	41.433	Ciona_savignyi
ENSHCOG00000008904	-	56	61.242	ENSCANG00000034556	SRRT	93	52.469	Colobus_angolensis_palliatus
ENSHCOG00000008904	-	56	60.510	ENSCGRG00001001594	Srrt	93	52.387	Cricetulus_griseus_chok1gshd
ENSHCOG00000008904	-	93	60.254	ENSCGRG00000007292	Srrt	90	56.871	Cricetulus_griseus_crigri
ENSHCOG00000008904	-	92	60.044	ENSCSEG00000017878	srrt	93	50.299	Cynoglossus_semilaevis
ENSHCOG00000008904	-	93	68.299	ENSCSEG00000005233	-	98	70.798	Cynoglossus_semilaevis
ENSHCOG00000008904	-	89	71.275	ENSCVAG00000017344	-	93	72.215	Cyprinodon_variegatus
ENSHCOG00000008904	-	89	63.216	ENSCVAG00000019848	srrt	92	55.856	Cyprinodon_variegatus
ENSHCOG00000008904	-	90	63.774	ENSDARG00000017762	srrt	92	54.633	Danio_rerio
ENSHCOG00000008904	-	56	60.722	ENSDNOG00000003851	SRRT	93	52.381	Dasypus_novemcinctus
ENSHCOG00000008904	-	95	52.788	ENSDORG00000005584	Srrt	92	57.322	Dipodomys_ordii
ENSHCOG00000008904	-	88	49.237	FBgn0033062	Ars2	67	49.558	Drosophila_melanogaster
ENSHCOG00000008904	-	79	58.750	ENSETEG00000016175	SRRT	68	58.125	Echinops_telfairi
ENSHCOG00000008904	-	76	49.840	ENSEBUG00000008517	-	88	49.211	Eptatretus_burgeri
ENSHCOG00000008904	-	95	51.943	ENSEASG00005016956	SRRT	93	52.206	Equus_asinus_asinus
ENSHCOG00000008904	-	95	52.061	ENSECAG00000012292	SRRT	93	52.206	Equus_caballus
ENSHCOG00000008904	-	78	65.385	ENSEEUG00000009117	SRRT	85	57.402	Erinaceus_europaeus
ENSHCOG00000008904	-	93	59.521	ENSELUG00000021216	-	93	59.476	Esox_lucius
ENSHCOG00000008904	-	91	64.270	ENSELUG00000006651	srrt	92	54.083	Esox_lucius
ENSHCOG00000008904	-	95	52.302	ENSFCAG00000006855	SRRT	93	51.526	Felis_catus
ENSHCOG00000008904	-	56	58.079	ENSFDAG00000021347	SRRT	89	55.098	Fukomys_damarensis
ENSHCOG00000008904	-	56	68.913	ENSFHEG00000004105	-	97	65.966	Fundulus_heteroclitus
ENSHCOG00000008904	-	76	64.352	ENSFHEG00000002756	srrt	84	63.591	Fundulus_heteroclitus
ENSHCOG00000008904	-	79	76.224	ENSGMOG00000018694	-	93	60.985	Gadus_morhua
ENSHCOG00000008904	-	95	48.467	ENSGMOG00000018619	srrt	92	50.790	Gadus_morhua
ENSHCOG00000008904	-	89	64.018	ENSGAFG00000005423	srrt	93	54.523	Gambusia_affinis
ENSHCOG00000008904	-	97	71.750	ENSGAFG00000020383	-	93	70.850	Gambusia_affinis
ENSHCOG00000008904	-	94	54.317	ENSGACG00000020387	srrt	92	53.106	Gasterosteus_aculeatus
ENSHCOG00000008904	-	93	66.749	ENSGACG00000001100	-	93	67.118	Gasterosteus_aculeatus
ENSHCOG00000008904	-	56	61.242	ENSGGOG00000001508	SRRT	93	52.593	Gorilla_gorilla
ENSHCOG00000008904	-	90	63.053	ENSHBUG00000002942	srrt	89	53.497	Haplochromis_burtoni
ENSHCOG00000008904	-	95	53.073	ENSHGLG00000008344	Srrt	90	56.871	Heterocephalus_glaber_female
ENSHCOG00000008904	-	95	53.333	ENSHGLG00100018857	Srrt	90	57.602	Heterocephalus_glaber_male
ENSHCOG00000008904	-	88	63.216	ENSIPUG00000021150	srrt	93	53.034	Ictalurus_punctatus
ENSHCOG00000008904	-	56	61.242	ENSSTOG00000013776	SRRT	93	52.593	Ictidomys_tridecemlineatus
ENSHCOG00000008904	-	95	52.878	ENSJJAG00000010446	Srrt	90	57.816	Jaculus_jaculus
ENSHCOG00000008904	-	89	62.389	ENSKMAG00000013599	srrt	92	55.784	Kryptolebias_marmoratus
ENSHCOG00000008904	-	93	68.850	ENSKMAG00000008468	-	93	68.850	Kryptolebias_marmoratus
ENSHCOG00000008904	-	95	52.941	ENSLBEG00000016308	srrt	92	55.076	Labrus_bergylta
ENSHCOG00000008904	-	64	63.894	ENSLBEG00000028983	-	99	65.669	Labrus_bergylta
ENSHCOG00000008904	-	94	45.499	ENSLACG00000001089	SRRT	92	45.929	Latimeria_chalumnae
ENSHCOG00000008904	-	78	55.851	ENSLOCG00000013658	srrt	100	46.294	Lepisosteus_oculatus
ENSHCOG00000008904	-	56	60.805	ENSLAFG00000007725	SRRT	93	52.580	Loxodonta_africana
ENSHCOG00000008904	-	56	61.242	ENSMFAG00000033745	SRRT	97	51.578	Macaca_fascicularis
ENSHCOG00000008904	-	56	60.722	ENSMMUG00000021255	SRRT	93	52.083	Macaca_mulatta
ENSHCOG00000008904	-	56	60.722	ENSMNEG00000041864	SRRT	94	51.578	Macaca_nemestrina
ENSHCOG00000008904	-	56	61.242	ENSMLEG00000029479	SRRT	95	51.578	Mandrillus_leucophaeus
ENSHCOG00000008904	-	85	63.556	ENSMAMG00000014311	srrt	93	54.233	Mastacembelus_armatus
ENSHCOG00000008904	-	97	72.738	ENSMAMG00000010681	-	93	73.034	Mastacembelus_armatus
ENSHCOG00000008904	-	90	63.053	ENSMZEG00005016135	srrt	89	53.922	Maylandia_zebra
ENSHCOG00000008904	-	97	71.412	ENSMZEG00005028002	-	98	72.588	Maylandia_zebra
ENSHCOG00000008904	-	95	52.607	ENSMAUG00000011386	Srrt	90	56.933	Mesocricetus_auratus
ENSHCOG00000008904	-	56	60.722	ENSMICG00000009471	SRRT	95	51.942	Microcebus_murinus
ENSHCOG00000008904	-	56	60.510	ENSMOCG00000001971	Srrt	90	57.113	Microtus_ochrogaster
ENSHCOG00000008904	-	95	55.875	ENSMMOG00000016399	srrt	92	56.282	Mola_mola
ENSHCOG00000008904	-	82	68.214	ENSMMOG00000011137	-	88	67.222	Mola_mola
ENSHCOG00000008904	-	55	59.101	ENSMODG00000004862	SRRT	89	59.315	Monodelphis_domestica
ENSHCOG00000008904	-	87	51.613	ENSMALG00000018604	srrt	96	50.803	Monopterus_albus
ENSHCOG00000008904	-	69	53.616	ENSMALG00000005567	-	100	53.299	Monopterus_albus
ENSHCOG00000008904	-	95	53.118	MGP_CAROLIEiJ_G0027870	Srrt	95	57.198	Mus_caroli
ENSHCOG00000008904	-	95	53.118	ENSMUSG00000037364	Srrt	95	57.198	Mus_musculus
ENSHCOG00000008904	-	56	61.171	MGP_PahariEiJ_G0024456	Srrt	95	57.588	Mus_pahari
ENSHCOG00000008904	-	95	53.118	MGP_SPRETEiJ_G0028875	Srrt	95	57.198	Mus_spretus
ENSHCOG00000008904	-	95	52.179	ENSMPUG00000015839	SRRT	93	51.526	Mustela_putorius_furo
ENSHCOG00000008904	-	56	60.593	ENSMLUG00000009975	SRRT	93	52.137	Myotis_lucifugus
ENSHCOG00000008904	-	95	51.957	ENSNGAG00000023715	Srrt	100	54.235	Nannospalax_galili
ENSHCOG00000008904	-	86	63.636	ENSNBRG00000019100	srrt	92	54.803	Neolamprologus_brichardi
ENSHCOG00000008904	-	94	50.434	ENSNLEG00000011987	SRRT	97	50.128	Nomascus_leucogenys
ENSHCOG00000008904	-	94	44.580	ENSMEUG00000011941	SRRT	92	44.994	Notamacropus_eugenii
ENSHCOG00000008904	-	65	56.716	ENSOPRG00000002502	-	67	54.545	Ochotona_princeps
ENSHCOG00000008904	-	56	61.171	ENSODEG00000016856	SRRT	90	57.602	Octodon_degus
ENSHCOG00000008904	-	97	71.295	ENSONIG00000016080	-	93	71.710	Oreochromis_niloticus
ENSHCOG00000008904	-	89	63.053	ENSONIG00000004242	srrt	93	53.550	Oreochromis_niloticus
ENSHCOG00000008904	-	95	54.394	ENSORLG00000008120	srrt	93	54.244	Oryzias_latipes
ENSHCOG00000008904	-	95	54.038	ENSORLG00020003058	srrt	93	54.121	Oryzias_latipes_hni
ENSHCOG00000008904	-	95	54.513	ENSORLG00015008062	srrt	93	54.367	Oryzias_latipes_hsok
ENSHCOG00000008904	-	95	56.705	ENSOMEG00000003155	srrt	92	55.921	Oryzias_melastigma
ENSHCOG00000008904	-	97	73.227	ENSOMEG00000006963	-	93	72.657	Oryzias_melastigma
ENSHCOG00000008904	-	56	60.722	ENSOGAG00000017242	SRRT	93	52.439	Otolemur_garnettii
ENSHCOG00000008904	-	56	61.325	ENSOARG00000015645	SRRT	93	51.784	Ovis_aries
ENSHCOG00000008904	-	56	61.242	ENSPPAG00000041090	SRRT	93	52.463	Pan_paniscus
ENSHCOG00000008904	-	95	52.675	ENSPPRG00000009557	SRRT	93	52.030	Panthera_pardus
ENSHCOG00000008904	-	95	52.302	ENSPTIG00000014355	SRRT	93	51.526	Panthera_tigris_altaica
ENSHCOG00000008904	-	56	61.242	ENSPTRG00000019511	SRRT	98	50.607	Pan_troglodytes
ENSHCOG00000008904	-	56	59.708	ENSPANG00000020763	SRRT	94	51.578	Papio_anubis
ENSHCOG00000008904	-	95	56.654	ENSPKIG00000005434	srrt	92	55.626	Paramormyrops_kingsleyae
ENSHCOG00000008904	-	94	54.768	ENSPKIG00000022212	-	93	54.803	Paramormyrops_kingsleyae
ENSHCOG00000008904	-	55	60.486	ENSPSIG00000016311	SRRT	93	51.870	Pelodiscus_sinensis
ENSHCOG00000008904	-	93	56.371	ENSPMGG00000002841	srrt	92	56.499	Periophthalmus_magnuspinnatus
ENSHCOG00000008904	-	56	61.171	ENSPEMG00000010834	Srrt	89	58.009	Peromyscus_maniculatus_bairdii
ENSHCOG00000008904	-	95	49.402	ENSPMAG00000009614	-	93	50.251	Petromyzon_marinus
ENSHCOG00000008904	-	55	60.430	ENSPCIG00000000816	SRRT	93	51.282	Phascolarctos_cinereus
ENSHCOG00000008904	-	97	72.306	ENSPFOG00000016554	-	93	71.129	Poecilia_formosa
ENSHCOG00000008904	-	89	63.877	ENSPFOG00000005704	srrt	93	54.823	Poecilia_formosa
ENSHCOG00000008904	-	90	63.355	ENSPLAG00000021992	srrt	93	54.172	Poecilia_latipinna
ENSHCOG00000008904	-	97	72.383	ENSPLAG00000004526	-	93	71.108	Poecilia_latipinna
ENSHCOG00000008904	-	89	63.436	ENSPMEG00000001182	srrt	93	54.523	Poecilia_mexicana
ENSHCOG00000008904	-	94	71.484	ENSPMEG00000001520	-	93	70.230	Poecilia_mexicana
ENSHCOG00000008904	-	94	56.024	ENSPREG00000022308	srrt	93	54.945	Poecilia_reticulata
ENSHCOG00000008904	-	56	58.542	ENSPCAG00000001621	SRRT	93	50.000	Procavia_capensis
ENSHCOG00000008904	-	95	51.790	ENSPCOG00000025751	SRRT	93	52.328	Propithecus_coquereli
ENSHCOG00000008904	-	72	53.390	ENSPVAG00000000834	SRRT	100	46.210	Pteropus_vampyrus
ENSHCOG00000008904	-	90	63.053	ENSPNYG00000018710	srrt	93	53.497	Pundamilia_nyererei
ENSHCOG00000008904	-	73	60.417	ENSPNAG00000010629	srrt	91	42.412	Pygocentrus_nattereri
ENSHCOG00000008904	-	56	51.178	ENSRNOG00000048277	AABR07035787.1	93	49.478	Rattus_norvegicus
ENSHCOG00000008904	-	56	60.722	ENSRBIG00000035718	SRRT	94	51.578	Rhinopithecus_bieti
ENSHCOG00000008904	-	56	60.722	ENSRROG00000030622	SRRT	95	51.578	Rhinopithecus_roxellana
ENSHCOG00000008904	-	56	61.242	ENSSBOG00000033570	SRRT	94	52.658	Saimiri_boliviensis_boliviensis
ENSHCOG00000008904	-	55	60.385	ENSSHAG00000007349	-	99	51.017	Sarcophilus_harrisii
ENSHCOG00000008904	-	88	65.044	ENSSFOG00015017293	srrt	92	54.041	Scleropages_formosus
ENSHCOG00000008904	-	94	57.125	ENSSMAG00000015342	srrt	93	55.583	Scophthalmus_maximus
ENSHCOG00000008904	-	55	76.419	ENSSMAG00000018195	-	93	67.775	Scophthalmus_maximus
ENSHCOG00000008904	-	90	63.877	ENSSDUG00000012049	srrt	92	55.220	Seriola_dumerili
ENSHCOG00000008904	-	56	65.806	ENSSDUG00000002051	-	95	65.665	Seriola_dumerili
ENSHCOG00000008904	-	89	63.920	ENSSLDG00000017477	srrt	80	63.982	Seriola_lalandi_dorsalis
ENSHCOG00000008904	-	85	70.722	ENSSPAG00000018943	-	92	72.788	Stegastes_partitus
ENSHCOG00000008904	-	89	63.077	ENSSPAG00000005665	srrt	91	53.771	Stegastes_partitus
ENSHCOG00000008904	-	52	61.731	ENSSSCG00000024789	SRRT	98	52.190	Sus_scrofa
ENSHCOG00000008904	-	91	62.256	ENSTRUG00000016075	srrt	93	54.268	Takifugu_rubripes
ENSHCOG00000008904	-	90	68.800	ENSTRUG00000000023	-	91	68.667	Takifugu_rubripes
ENSHCOG00000008904	-	93	63.403	ENSTNIG00000003111	-	93	65.470	Tetraodon_nigroviridis
ENSHCOG00000008904	-	72	52.941	ENSTNIG00000011779	srrt	99	53.560	Tetraodon_nigroviridis
ENSHCOG00000008904	-	56	60.805	ENSTTRG00000011104	SRRT	93	51.648	Tursiops_truncatus
ENSHCOG00000008904	-	94	51.990	ENSUAMG00000027997	SRRT	95	51.961	Ursus_americanus
ENSHCOG00000008904	-	95	51.716	ENSUMAG00000011295	SRRT	93	51.961	Ursus_maritimus
ENSHCOG00000008904	-	95	52.426	ENSVVUG00000023572	SRRT	93	51.404	Vulpes_vulpes
ENSHCOG00000008904	-	77	57.019	ENSXETG00000025124	srrt	81	52.601	Xenopus_tropicalis
ENSHCOG00000008904	-	59	61.064	ENSXCOG00000013105	-	100	60.543	Xiphophorus_couchianus
ENSHCOG00000008904	-	93	64.018	ENSXMAG00000007627	srrt	92	56.596	Xiphophorus_maculatus
ENSHCOG00000008904	-	97	72.000	ENSXMAG00000002090	-	93	70.942	Xiphophorus_maculatus