EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000009056 (Gene tree)
Gene ID: 109532036
Gene Symbol: htatsf1
Alias: zgc:66252
Full Name: HIV Tat-specific factor 1 homolog
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 3731 bases
Position: chrKV880451.1:8423916-8427646
Accession: 109532036
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000007118	RRM_1	PF00076.22	3.2e-15	1	2
ENSHCOP00000007118	RRM_1	PF00076.22	3.2e-15	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000002548	-	1597	XM_019896627	ENSHCOP00000007118	429 (aa)	XP_019752186	UPI00094E105F

Gene Model

Click here to download ENSHCOG00000009056's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000009056's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000009056	htatsf1	90	61.097	ENSG00000102241	HTATSF1	100	56.067	Homo_sapiens
ENSHCOG00000009056	htatsf1	99	71.492	ENSAPOG00000009823	htatsf1	99	71.047	Acanthochromis_polyacanthus
ENSHCOG00000009056	htatsf1	100	70.354	ENSACIG00000020459	htatsf1	99	69.845	Amphilophus_citrinellus
ENSHCOG00000009056	htatsf1	99	68.251	ENSAOCG00000020994	htatsf1	99	68.627	Amphiprion_ocellaris
ENSHCOG00000009056	htatsf1	99	69.079	ENSAPEG00000016432	htatsf1	99	69.737	Amphiprion_percula
ENSHCOG00000009056	htatsf1	88	76.640	ENSATEG00000008903	htatsf1	86	76.842	Anabas_testudineus
ENSHCOG00000009056	htatsf1	92	60.664	ENSAPLG00000012401	HTATSF1	99	59.330	Anas_platyrhynchos
ENSHCOG00000009056	htatsf1	80	63.873	ENSACAG00000009346	HTATSF1	98	58.438	Anolis_carolinensis
ENSHCOG00000009056	htatsf1	99	69.095	ENSACLG00000008096	htatsf1	99	68.958	Astatotilapia_calliptera
ENSHCOG00000009056	htatsf1	100	65.076	ENSAMXG00000008387	htatsf1	100	65.076	Astyanax_mexicanus
ENSHCOG00000009056	htatsf1	92	59.214	ENSBTAG00000032711	HTATSF1	51	60.560	Bos_taurus
ENSHCOG00000009056	htatsf1	79	38.329	WBGene00022025	Y65B4A.1	75	38.329	Caenorhabditis_elegans
ENSHCOG00000009056	htatsf1	93	60.096	ENSCJAG00000003676	HTATSF1	50	62.694	Callithrix_jacchus
ENSHCOG00000009056	htatsf1	89	61.578	ENSCAFG00000023294	HTATSF1	50	61.578	Canis_familiaris
ENSHCOG00000009056	htatsf1	92	59.214	ENSCHIG00000000312	HTATSF1	50	62.341	Capra_hircus
ENSHCOG00000009056	htatsf1	90	61.461	ENSTSYG00000028876	HTATSF1	50	61.832	Carlito_syrichta
ENSHCOG00000009056	htatsf1	94	59.286	ENSCCAG00000022701	-	50	61.917	Cebus_capucinus
ENSHCOG00000009056	htatsf1	89	60.305	ENSCCAG00000025329	-	54	61.458	Cebus_capucinus
ENSHCOG00000009056	htatsf1	90	61.965	ENSCATG00000029963	HTATSF1	50	62.341	Cercocebus_atys
ENSHCOG00000009056	htatsf1	90	61.965	ENSCSAG00000007505	HTATSF1	50	62.341	Chlorocebus_sabaeus
ENSHCOG00000009056	htatsf1	100	60.832	ENSCPBG00000026092	HTATSF1	99	60.394	Chrysemys_picta_bellii
ENSHCOG00000009056	htatsf1	93	45.000	ENSCING00000005914	-	82	44.658	Ciona_intestinalis
ENSHCOG00000009056	htatsf1	89	43.646	ENSCSAVG00000000371	-	87	43.137	Ciona_savignyi
ENSHCOG00000009056	htatsf1	90	61.713	ENSCANG00000028495	HTATSF1	50	62.087	Colobus_angolensis_palliatus
ENSHCOG00000009056	htatsf1	99	70.655	ENSCVAG00000014070	htatsf1	98	70.470	Cyprinodon_variegatus
ENSHCOG00000009056	htatsf1	99	64.317	ENSDARG00000056649	htatsf1	84	71.279	Danio_rerio
ENSHCOG00000009056	htatsf1	81	47.578	FBgn0037081	barc	62	46.439	Drosophila_melanogaster
ENSHCOG00000009056	htatsf1	87	55.128	ENSEBUG00000001534	htatsf1	78	54.872	Eptatretus_burgeri
ENSHCOG00000009056	htatsf1	99	60.793	ENSELUG00000005486	htatsf1	89	61.538	Esox_lucius
ENSHCOG00000009056	htatsf1	90	60.100	ENSFCAG00000031924	HTATSF1	50	60.453	Felis_catus
ENSHCOG00000009056	htatsf1	100	58.734	ENSFALG00000003728	HTATSF1	99	58.297	Ficedula_albicollis
ENSHCOG00000009056	htatsf1	95	58.670	ENSFDAG00000008617	HTATSF1	50	60.453	Fukomys_damarensis
ENSHCOG00000009056	htatsf1	99	72.912	ENSFHEG00000020286	htatsf1	99	71.136	Fundulus_heteroclitus
ENSHCOG00000009056	htatsf1	83	72.626	ENSGMOG00000016444	htatsf1	98	72.269	Gadus_morhua
ENSHCOG00000009056	htatsf1	100	59.091	ENSGALG00000006410	HTATSF1	99	57.359	Gallus_gallus
ENSHCOG00000009056	htatsf1	99	70.404	ENSGAFG00000003041	htatsf1	98	70.495	Gambusia_affinis
ENSHCOG00000009056	htatsf1	99	71.236	ENSGACG00000020459	htatsf1	99	70.295	Gasterosteus_aculeatus
ENSHCOG00000009056	htatsf1	90	61.097	ENSGGOG00000026072	HTATSF1	50	61.461	Gorilla_gorilla
ENSHCOG00000009056	htatsf1	99	69.316	ENSHBUG00000004392	htatsf1	99	69.180	Haplochromis_burtoni
ENSHCOG00000009056	htatsf1	90	60.500	ENSHGLG00000005328	HTATSF1	50	60.859	Heterocephalus_glaber_female
ENSHCOG00000009056	htatsf1	88	71.579	ENSIPUG00000017828	htatsf1	80	70.649	Ictalurus_punctatus
ENSHCOG00000009056	htatsf1	90	62.217	ENSSTOG00000012505	HTATSF1	51	61.832	Ictidomys_tridecemlineatus
ENSHCOG00000009056	htatsf1	99	69.933	ENSKMAG00000007622	htatsf1	99	68.597	Kryptolebias_marmoratus
ENSHCOG00000009056	htatsf1	100	69.095	ENSLBEG00000001154	htatsf1	99	68.444	Labrus_bergylta
ENSHCOG00000009056	htatsf1	99	58.520	ENSLACG00000015989	HTATSF1	99	57.522	Latimeria_chalumnae
ENSHCOG00000009056	htatsf1	99	44.161	ENSLOCG00000015118	htatsf1	81	47.558	Lepisosteus_oculatus
ENSHCOG00000009056	htatsf1	90	61.055	ENSLAFG00000014307	HTATSF1	56	60.914	Loxodonta_africana
ENSHCOG00000009056	htatsf1	90	61.965	ENSMFAG00000044705	HTATSF1	50	62.595	Macaca_fascicularis
ENSHCOG00000009056	htatsf1	90	61.965	ENSMMUG00000006450	HTATSF1	50	62.341	Macaca_mulatta
ENSHCOG00000009056	htatsf1	90	61.965	ENSMNEG00000024084	HTATSF1	55	62.341	Macaca_nemestrina
ENSHCOG00000009056	htatsf1	90	61.965	ENSMLEG00000035511	HTATSF1	50	62.341	Mandrillus_leucophaeus
ENSHCOG00000009056	htatsf1	99	70.270	ENSMAMG00000021225	htatsf1	99	70.000	Mastacembelus_armatus
ENSHCOG00000009056	htatsf1	99	69.095	ENSMZEG00005000485	htatsf1	99	68.958	Maylandia_zebra
ENSHCOG00000009056	htatsf1	95	59.226	ENSMGAG00000003558	HTATSF1	99	57.403	Meleagris_gallopavo
ENSHCOG00000009056	htatsf1	90	60.859	ENSMAUG00000007235	Htatsf1	51	61.480	Mesocricetus_auratus
ENSHCOG00000009056	htatsf1	90	61.111	ENSMICG00000009348	HTATSF1	51	61.323	Microcebus_murinus
ENSHCOG00000009056	htatsf1	90	62.121	ENSMOCG00000023007	-	50	62.500	Microtus_ochrogaster
ENSHCOG00000009056	htatsf1	90	60.859	ENSMOCG00000022370	-	50	61.224	Microtus_ochrogaster
ENSHCOG00000009056	htatsf1	99	70.227	ENSMMOG00000011013	htatsf1	99	70.159	Mola_mola
ENSHCOG00000009056	htatsf1	99	59.292	ENSMODG00000014087	-	97	58.758	Monodelphis_domestica
ENSHCOG00000009056	htatsf1	58	60.156	ENSMODG00000000199	-	91	58.159	Monodelphis_domestica
ENSHCOG00000009056	htatsf1	99	69.575	ENSMALG00000019977	htatsf1	99	68.680	Monopterus_albus
ENSHCOG00000009056	htatsf1	94	58.294	MGP_CAROLIEiJ_G0033094	Htatsf1	51	60.354	Mus_caroli
ENSHCOG00000009056	htatsf1	94	58.768	ENSMUSG00000067873	Htatsf1	50	61.323	Mus_musculus
ENSHCOG00000009056	htatsf1	94	59.005	MGP_SPRETEiJ_G0034249	Htatsf1	50	61.069	Mus_spretus
ENSHCOG00000009056	htatsf1	88	61.140	ENSMLUG00000009234	-	51	61.140	Myotis_lucifugus
ENSHCOG00000009056	htatsf1	89	60.714	ENSNGAG00000017831	Htatsf1	51	60.714	Nannospalax_galili
ENSHCOG00000009056	htatsf1	99	69.556	ENSNBRG00000003818	htatsf1	99	69.180	Neolamprologus_brichardi
ENSHCOG00000009056	htatsf1	90	60.848	ENSNLEG00000002746	HTATSF1	50	61.209	Nomascus_leucogenys
ENSHCOG00000009056	htatsf1	94	62.077	ENSMEUG00000004133	-	89	65.625	Notamacropus_eugenii
ENSHCOG00000009056	htatsf1	99	69.604	ENSONIG00000008638	htatsf1	99	69.180	Oreochromis_niloticus
ENSHCOG00000009056	htatsf1	92	59.712	ENSOANG00000011674	-	99	59.233	Ornithorhynchus_anatinus
ENSHCOG00000009056	htatsf1	90	60.101	ENSOCUG00000012570	HTATSF1	50	60.459	Oryctolagus_cuniculus
ENSHCOG00000009056	htatsf1	99	67.181	ENSORLG00000002356	htatsf1	99	67.181	Oryzias_latipes
ENSHCOG00000009056	htatsf1	99	67.396	ENSORLG00020017818	htatsf1	96	67.325	Oryzias_latipes_hni
ENSHCOG00000009056	htatsf1	99	66.814	ENSORLG00015002268	htatsf1	99	66.667	Oryzias_latipes_hsok
ENSHCOG00000009056	htatsf1	99	69.757	ENSOMEG00000007564	htatsf1	99	68.433	Oryzias_melastigma
ENSHCOG00000009056	htatsf1	90	61.097	ENSPPAG00000024268	HTATSF1	50	61.461	Pan_paniscus
ENSHCOG00000009056	htatsf1	90	60.349	ENSPPRG00000014209	HTATSF1	50	60.705	Panthera_pardus
ENSHCOG00000009056	htatsf1	90	61.097	ENSPTRG00000044591	HTATSF1	50	61.461	Pan_troglodytes
ENSHCOG00000009056	htatsf1	99	66.004	ENSPKIG00000024852	htatsf1	84	72.208	Paramormyrops_kingsleyae
ENSHCOG00000009056	htatsf1	76	63.873	ENSPSIG00000010192	HTATSF1	98	62.644	Pelodiscus_sinensis
ENSHCOG00000009056	htatsf1	100	67.920	ENSPMGG00000006172	htatsf1	100	66.297	Periophthalmus_magnuspinnatus
ENSHCOG00000009056	htatsf1	90	61.364	ENSPEMG00000022397	Htatsf1	50	61.480	Peromyscus_maniculatus_bairdii
ENSHCOG00000009056	htatsf1	88	65.026	ENSPCIG00000030173	-	86	65.026	Phascolarctos_cinereus
ENSHCOG00000009056	htatsf1	91	59.548	ENSPCIG00000018896	-	83	60.733	Phascolarctos_cinereus
ENSHCOG00000009056	htatsf1	99	71.622	ENSPFOG00000007871	htatsf1	96	70.721	Poecilia_formosa
ENSHCOG00000009056	htatsf1	99	71.847	ENSPLAG00000007532	htatsf1	99	70.946	Poecilia_latipinna
ENSHCOG00000009056	htatsf1	99	71.847	ENSPMEG00000000352	htatsf1	99	70.721	Poecilia_mexicana
ENSHCOG00000009056	htatsf1	99	72.235	ENSPREG00000007811	htatsf1	99	71.141	Poecilia_reticulata
ENSHCOG00000009056	htatsf1	90	61.097	ENSPPYG00000020765	HTATSF1	50	61.461	Pongo_abelii
ENSHCOG00000009056	htatsf1	94	52.693	ENSPCAG00000010576	HTATSF1	52	55.584	Procavia_capensis
ENSHCOG00000009056	htatsf1	90	61.461	ENSPCOG00000021823	HTATSF1	50	61.578	Propithecus_coquereli
ENSHCOG00000009056	htatsf1	88	61.399	ENSPVAG00000010281	HTATSF1	53	61.780	Pteropus_vampyrus
ENSHCOG00000009056	htatsf1	99	69.095	ENSPNYG00000016693	htatsf1	99	68.958	Pundamilia_nyererei
ENSHCOG00000009056	htatsf1	100	64.222	ENSPNAG00000006166	htatsf1	100	65.302	Pygocentrus_nattereri
ENSHCOG00000009056	htatsf1	90	61.965	ENSRROG00000021939	HTATSF1	50	62.341	Rhinopithecus_roxellana
ENSHCOG00000009056	htatsf1	94	59.286	ENSSBOG00000027186	-	50	62.176	Saimiri_boliviensis_boliviensis
ENSHCOG00000009056	htatsf1	99	58.575	ENSSHAG00000018908	-	83	64.858	Sarcophilus_harrisii
ENSHCOG00000009056	htatsf1	89	63.144	ENSSHAG00000006440	-	97	63.144	Sarcophilus_harrisii
ENSHCOG00000009056	htatsf1	88	70.079	ENSSFOG00015012002	htatsf1	80	69.291	Scleropages_formosus
ENSHCOG00000009056	htatsf1	99	71.875	ENSSMAG00000002970	htatsf1	98	71.205	Scophthalmus_maximus
ENSHCOG00000009056	htatsf1	99	68.409	ENSSDUG00000020002	htatsf1	99	67.661	Seriola_dumerili
ENSHCOG00000009056	htatsf1	99	70.000	ENSSLDG00000016880	htatsf1	99	69.351	Seriola_lalandi_dorsalis
ENSHCOG00000009056	htatsf1	94	55.035	ENSSARG00000005193	HTATSF1	51	59.318	Sorex_araneus
ENSHCOG00000009056	htatsf1	99	57.952	ENSSPUG00000014767	HTATSF1	99	57.952	Sphenodon_punctatus
ENSHCOG00000009056	htatsf1	99	69.604	ENSSPAG00000000732	htatsf1	99	68.602	Stegastes_partitus
ENSHCOG00000009056	htatsf1	90	60.957	ENSSSCG00000023062	HTATSF1	55	61.323	Sus_scrofa
ENSHCOG00000009056	htatsf1	99	58.499	ENSTGUG00000002099	HTATSF1	99	58.278	Taeniopygia_guttata
ENSHCOG00000009056	htatsf1	99	69.005	ENSTRUG00000013383	htatsf1	99	68.192	Takifugu_rubripes
ENSHCOG00000009056	htatsf1	99	69.161	ENSTNIG00000016140	htatsf1	99	68.807	Tetraodon_nigroviridis
ENSHCOG00000009056	htatsf1	81	60.845	ENSTTRG00000002269	HTATSF1	58	60.845	Tursiops_truncatus
ENSHCOG00000009056	htatsf1	90	60.705	ENSUAMG00000012048	HTATSF1	50	61.069	Ursus_americanus
ENSHCOG00000009056	htatsf1	99	57.658	ENSXETG00000019749	htatsf1	84	57.207	Xenopus_tropicalis
ENSHCOG00000009056	htatsf1	93	75.309	ENSXCOG00000006912	htatsf1	87	78.010	Xiphophorus_couchianus
ENSHCOG00000009056	htatsf1	99	71.847	ENSXMAG00000000490	htatsf1	99	71.982	Xiphophorus_maculatus