EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000009115 (Gene tree)
Gene ID: 109509128
Gene Symbol: -
Alias: -
Full Name: splicing factor 3B subunit 5
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 261 bases
Position: chrLVHJ01055520.1:33-293
Accession: 109509128
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000007180	SF3b10	PF07189.11	7.8e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000002438	-	261	XM_019859030	ENSHCOP00000007180	86 (aa)	XP_019714589	UPI00094E16E9

Gene Model

Click here to download ENSHCOG00000009115's gene model file

Pathways

Pathway ID	Pathway Name	Source
hcq03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000009115's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000009115	-	100	100.000	ENSHCOG00000016806	sf3b5	100	100.000
ENSHCOG00000009115	-	100	100.000	ENSHCOG00000016802	sf3b5	100	100.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000009115	-	99	91.765	ENSG00000169976	SF3B5	99	91.765	Homo_sapiens
ENSHCOG00000009115	-	100	97.674	ENSAPOG00000001721	sf3b5	100	97.674	Acanthochromis_polyacanthus
ENSHCOG00000009115	-	100	97.674	ENSACIG00000008106	sf3b5	100	97.674	Amphilophus_citrinellus
ENSHCOG00000009115	-	100	97.674	ENSAOCG00000023367	sf3b5	100	97.674	Amphiprion_ocellaris
ENSHCOG00000009115	-	100	97.674	ENSAPEG00000004605	sf3b5	100	97.674	Amphiprion_percula
ENSHCOG00000009115	-	100	98.837	ENSATEG00000009720	sf3b5	100	98.837	Anabas_testudineus
ENSHCOG00000009115	-	100	90.698	ENSACAG00000007948	SF3B5	100	90.698	Anolis_carolinensis
ENSHCOG00000009115	-	99	91.765	ENSANAG00000019999	SF3B5	99	91.765	Aotus_nancymaae
ENSHCOG00000009115	-	100	97.674	ENSACLG00000022410	sf3b5	100	97.674	Astatotilapia_calliptera
ENSHCOG00000009115	-	99	91.765	ENSBTAG00000009795	SF3B5	99	91.765	Bos_taurus
ENSHCOG00000009115	-	99	91.765	ENSCJAG00000046566	SF3B5	99	91.765	Callithrix_jacchus
ENSHCOG00000009115	-	99	91.765	ENSCAFG00000032495	SF3B5	99	91.765	Canis_familiaris
ENSHCOG00000009115	-	99	91.765	ENSCAFG00020000873	SF3B5	99	91.765	Canis_lupus_dingo
ENSHCOG00000009115	-	99	91.765	ENSCHIG00000007987	SF3B5	99	91.765	Capra_hircus
ENSHCOG00000009115	-	99	91.765	ENSTSYG00000012236	SF3B5	99	91.765	Carlito_syrichta
ENSHCOG00000009115	-	99	91.765	ENSCPOG00000012435	SF3B5	99	91.765	Cavia_porcellus
ENSHCOG00000009115	-	99	91.765	ENSCCAG00000006528	SF3B5	99	91.765	Cebus_capucinus
ENSHCOG00000009115	-	99	91.765	ENSCATG00000010192	SF3B5	99	91.765	Cercocebus_atys
ENSHCOG00000009115	-	99	91.765	ENSCLAG00000017802	SF3B5	99	91.765	Chinchilla_lanigera
ENSHCOG00000009115	-	99	91.765	ENSCSAG00000000187	SF3B5	99	91.765	Chlorocebus_sabaeus
ENSHCOG00000009115	-	100	90.698	ENSCPBG00000017148	SF3B5	100	90.698	Chrysemys_picta_bellii
ENSHCOG00000009115	-	98	72.619	ENSCING00000021953	-	98	72.619	Ciona_intestinalis
ENSHCOG00000009115	-	99	91.765	ENSCANG00000002639	SF3B5	99	91.765	Colobus_angolensis_palliatus
ENSHCOG00000009115	-	99	90.588	ENSCGRG00001007249	Sf3b5	99	90.588	Cricetulus_griseus_chok1gshd
ENSHCOG00000009115	-	99	90.588	ENSCGRG00000019185	Sf3b5	99	90.588	Cricetulus_griseus_crigri
ENSHCOG00000009115	-	100	97.674	ENSCSEG00000003216	sf3b5	100	97.674	Cynoglossus_semilaevis
ENSHCOG00000009115	-	100	98.837	ENSCVAG00000005040	sf3b5	100	98.837	Cyprinodon_variegatus
ENSHCOG00000009115	-	100	94.186	ENSDARG00000016855	sf3b5	100	94.186	Danio_rerio
ENSHCOG00000009115	-	99	91.765	ENSDNOG00000048829	SF3B5	81	91.765	Dasypus_novemcinctus
ENSHCOG00000009115	-	99	91.765	ENSDORG00000005838	Sf3b5	99	91.765	Dipodomys_ordii
ENSHCOG00000009115	-	99	81.176	FBgn0040534	Sf3b5	100	81.176	Drosophila_melanogaster
ENSHCOG00000009115	-	99	91.765	ENSETEG00000004047	SF3B5	99	91.765	Echinops_telfairi
ENSHCOG00000009115	-	99	81.176	ENSEBUG00000002311	sf3b5	100	81.176	Eptatretus_burgeri
ENSHCOG00000009115	-	99	91.765	ENSEASG00005009522	SF3B5	99	91.765	Equus_asinus_asinus
ENSHCOG00000009115	-	99	91.765	ENSECAG00000005457	SF3B5	99	91.765	Equus_caballus
ENSHCOG00000009115	-	100	97.674	ENSELUG00000014290	SF3B5	100	97.674	Esox_lucius
ENSHCOG00000009115	-	99	91.765	ENSFCAG00000000936	SF3B5	99	91.765	Felis_catus
ENSHCOG00000009115	-	100	89.535	ENSFALG00000015012	SF3B5	100	89.535	Ficedula_albicollis
ENSHCOG00000009115	-	99	91.765	ENSFDAG00000003664	SF3B5	99	91.765	Fukomys_damarensis
ENSHCOG00000009115	-	100	98.837	ENSFHEG00000020301	sf3b5	100	98.837	Fundulus_heteroclitus
ENSHCOG00000009115	-	100	96.512	ENSGMOG00000019972	sf3b5	100	96.512	Gadus_morhua
ENSHCOG00000009115	-	100	91.860	ENSGALG00000030824	SF3B5	100	91.860	Gallus_gallus
ENSHCOG00000009115	-	100	98.837	ENSGAFG00000000271	sf3b5	100	98.837	Gambusia_affinis
ENSHCOG00000009115	-	100	98.837	ENSGACG00000010363	sf3b5	100	98.837	Gasterosteus_aculeatus
ENSHCOG00000009115	-	100	90.698	ENSGAGG00000011434	SF3B5	100	90.698	Gopherus_agassizii
ENSHCOG00000009115	-	100	86.047	ENSGAGG00000000646	-	100	86.047	Gopherus_agassizii
ENSHCOG00000009115	-	99	91.765	ENSGGOG00000001537	SF3B5	99	91.765	Gorilla_gorilla
ENSHCOG00000009115	-	100	97.674	ENSHBUG00000008925	sf3b5	100	97.674	Haplochromis_burtoni
ENSHCOG00000009115	-	99	91.765	ENSHGLG00000021406	SF3B5	99	91.765	Heterocephalus_glaber_female
ENSHCOG00000009115	-	99	91.765	ENSHGLG00100020370	SF3B5	99	91.765	Heterocephalus_glaber_male
ENSHCOG00000009115	-	100	96.512	ENSIPUG00000015166	sf3b5	100	96.512	Ictalurus_punctatus
ENSHCOG00000009115	-	99	91.765	ENSSTOG00000003347	SF3B5	99	91.765	Ictidomys_tridecemlineatus
ENSHCOG00000009115	-	99	91.765	ENSJJAG00000001857	Sf3b5	99	91.765	Jaculus_jaculus
ENSHCOG00000009115	-	100	98.837	ENSKMAG00000002249	sf3b5	100	98.837	Kryptolebias_marmoratus
ENSHCOG00000009115	-	100	98.837	ENSLBEG00000019847	sf3b5	100	98.837	Labrus_bergylta
ENSHCOG00000009115	-	100	90.698	ENSLACG00000000946	SF3B5	100	90.698	Latimeria_chalumnae
ENSHCOG00000009115	-	100	97.674	ENSLOCG00000017352	sf3b5	100	97.674	Lepisosteus_oculatus
ENSHCOG00000009115	-	99	91.765	ENSLAFG00000032489	SF3B5	99	91.765	Loxodonta_africana
ENSHCOG00000009115	-	99	91.765	ENSMFAG00000029753	SF3B5	99	91.765	Macaca_fascicularis
ENSHCOG00000009115	-	99	91.765	ENSMMUG00000047691	SF3B5	99	91.765	Macaca_mulatta
ENSHCOG00000009115	-	99	91.765	ENSMNEG00000028236	SF3B5	99	91.765	Macaca_nemestrina
ENSHCOG00000009115	-	99	91.765	ENSMLEG00000007622	SF3B5	99	91.765	Mandrillus_leucophaeus
ENSHCOG00000009115	-	100	97.674	ENSMAMG00000021639	sf3b5	100	97.674	Mastacembelus_armatus
ENSHCOG00000009115	-	100	97.674	ENSMZEG00005028115	SF3B5	100	97.674	Maylandia_zebra
ENSHCOG00000009115	-	100	97.674	ENSMZEG00005027408	sf3b5	100	97.674	Maylandia_zebra
ENSHCOG00000009115	-	100	86.047	ENSMZEG00005027407	sf3b5	100	86.047	Maylandia_zebra
ENSHCOG00000009115	-	100	91.860	ENSMGAG00000015849	SF3B5	100	91.860	Meleagris_gallopavo
ENSHCOG00000009115	-	99	90.588	ENSMAUG00000008283	Sf3b5	99	90.588	Mesocricetus_auratus
ENSHCOG00000009115	-	99	91.765	ENSMICG00000014922	SF3B5	99	91.765	Microcebus_murinus
ENSHCOG00000009115	-	99	90.588	ENSMOCG00000001713	Sf3b5	99	90.588	Microtus_ochrogaster
ENSHCOG00000009115	-	100	97.674	ENSMMOG00000007956	sf3b5	100	97.674	Mola_mola
ENSHCOG00000009115	-	99	91.765	ENSMODG00000023291	SF3B5	83	91.765	Monodelphis_domestica
ENSHCOG00000009115	-	91	95.062	ENSMALG00000020357	sf3b5	99	95.062	Monopterus_albus
ENSHCOG00000009115	-	99	90.588	MGP_CAROLIEiJ_G0015120	Sf3b5	99	90.588	Mus_caroli
ENSHCOG00000009115	-	99	90.588	ENSMUSG00000078348	Sf3b5	99	90.588	Mus_musculus
ENSHCOG00000009115	-	99	90.588	MGP_PahariEiJ_G0023739	Sf3b5	99	90.588	Mus_pahari
ENSHCOG00000009115	-	99	90.588	MGP_SPRETEiJ_G0015928	Sf3b5	99	90.588	Mus_spretus
ENSHCOG00000009115	-	99	91.765	ENSMPUG00000018379	SF3B5	99	91.765	Mustela_putorius_furo
ENSHCOG00000009115	-	99	91.765	ENSMLUG00000028504	-	99	91.765	Myotis_lucifugus
ENSHCOG00000009115	-	93	92.500	ENSMLUG00000025546	-	93	92.500	Myotis_lucifugus
ENSHCOG00000009115	-	99	89.412	ENSMLUG00000010802	-	99	89.412	Myotis_lucifugus
ENSHCOG00000009115	-	99	91.765	ENSNGAG00000010732	Sf3b5	99	91.765	Nannospalax_galili
ENSHCOG00000009115	-	100	97.674	ENSNBRG00000014383	sf3b5	100	97.674	Neolamprologus_brichardi
ENSHCOG00000009115	-	99	91.765	ENSNLEG00000019307	SF3B5	99	91.765	Nomascus_leucogenys
ENSHCOG00000009115	-	99	91.765	ENSMEUG00000005440	-	99	91.765	Notamacropus_eugenii
ENSHCOG00000009115	-	99	91.765	ENSMEUG00000005445	-	99	91.765	Notamacropus_eugenii
ENSHCOG00000009115	-	99	92.941	ENSOPRG00000015107	SF3B5	99	92.941	Ochotona_princeps
ENSHCOG00000009115	-	99	91.765	ENSODEG00000019507	SF3B5	99	91.765	Octodon_degus
ENSHCOG00000009115	-	100	97.674	ENSONIG00000020725	sf3b5	100	97.674	Oreochromis_niloticus
ENSHCOG00000009115	-	67	91.379	ENSOANG00000015301	SF3B5	95	91.379	Ornithorhynchus_anatinus
ENSHCOG00000009115	-	99	91.765	ENSOCUG00000008752	SF3B5	99	91.765	Oryctolagus_cuniculus
ENSHCOG00000009115	-	100	96.512	ENSORLG00000004925	sf3b5	100	96.512	Oryzias_latipes
ENSHCOG00000009115	-	100	96.512	ENSORLG00020011625	sf3b5	100	96.512	Oryzias_latipes_hni
ENSHCOG00000009115	-	100	96.512	ENSORLG00015017061	sf3b5	100	96.512	Oryzias_latipes_hsok
ENSHCOG00000009115	-	100	96.512	ENSOMEG00000010620	sf3b5	100	96.512	Oryzias_melastigma
ENSHCOG00000009115	-	99	91.765	ENSOGAG00000012152	SF3B5	99	91.765	Otolemur_garnettii
ENSHCOG00000009115	-	99	88.235	ENSOARG00000002617	SF3B5	99	88.235	Ovis_aries
ENSHCOG00000009115	-	92	92.405	ENSOARG00000019486	-	95	92.405	Ovis_aries
ENSHCOG00000009115	-	99	91.765	ENSPPAG00000012940	SF3B5	99	91.765	Pan_paniscus
ENSHCOG00000009115	-	99	91.765	ENSPPRG00000021262	SF3B5	99	91.765	Panthera_pardus
ENSHCOG00000009115	-	99	91.765	ENSPTIG00000001952	SF3B5	99	91.765	Panthera_tigris_altaica
ENSHCOG00000009115	-	99	91.765	ENSPTRG00000018676	SF3B5	99	91.765	Pan_troglodytes
ENSHCOG00000009115	-	99	91.765	ENSPANG00000034242	SF3B5	99	91.765	Papio_anubis
ENSHCOG00000009115	-	100	95.349	ENSPKIG00000006057	sf3b5	100	95.349	Paramormyrops_kingsleyae
ENSHCOG00000009115	-	100	90.698	ENSPSIG00000001262	SF3B5	100	90.698	Pelodiscus_sinensis
ENSHCOG00000009115	-	100	97.674	ENSPMGG00000014804	sf3b5	100	97.674	Periophthalmus_magnuspinnatus
ENSHCOG00000009115	-	99	90.588	ENSPEMG00000012931	Sf3b5	99	90.588	Peromyscus_maniculatus_bairdii
ENSHCOG00000009115	-	100	87.209	ENSPMAG00000010296	sf3b5	100	87.209	Petromyzon_marinus
ENSHCOG00000009115	-	99	70.588	ENSPCIG00000025007	-	99	70.588	Phascolarctos_cinereus
ENSHCOG00000009115	-	93	93.750	ENSPCIG00000011344	-	78	93.750	Phascolarctos_cinereus
ENSHCOG00000009115	-	100	98.837	ENSPFOG00000019994	sf3b5	100	98.837	Poecilia_formosa
ENSHCOG00000009115	-	100	98.837	ENSPLAG00000008412	sf3b5	100	98.837	Poecilia_latipinna
ENSHCOG00000009115	-	100	98.837	ENSPMEG00000020050	sf3b5	100	98.837	Poecilia_mexicana
ENSHCOG00000009115	-	100	98.837	ENSPREG00000009242	sf3b5	100	98.837	Poecilia_reticulata
ENSHCOG00000009115	-	99	91.765	ENSPPYG00000017068	SF3B5	99	91.765	Pongo_abelii
ENSHCOG00000009115	-	99	91.765	ENSPCAG00000009332	SF3B5	99	91.765	Procavia_capensis
ENSHCOG00000009115	-	99	91.765	ENSPCOG00000013754	SF3B5	99	91.765	Propithecus_coquereli
ENSHCOG00000009115	-	56	93.750	ENSPVAG00000002820	SF3B5	100	93.750	Pteropus_vampyrus
ENSHCOG00000009115	-	100	97.674	ENSPNYG00000002075	sf3b5	100	97.674	Pundamilia_nyererei
ENSHCOG00000009115	-	100	95.349	ENSPNAG00000004942	sf3b5	100	95.349	Pygocentrus_nattereri
ENSHCOG00000009115	-	99	90.588	ENSRNOG00000014908	Sf3b5	99	90.588	Rattus_norvegicus
ENSHCOG00000009115	-	99	91.765	ENSRBIG00000006301	SF3B5	99	91.765	Rhinopithecus_bieti
ENSHCOG00000009115	-	99	91.765	ENSRROG00000037067	SF3B5	99	91.765	Rhinopithecus_roxellana
ENSHCOG00000009115	-	99	91.765	ENSSBOG00000006122	SF3B5	99	91.765	Saimiri_boliviensis_boliviensis
ENSHCOG00000009115	-	99	90.588	ENSSHAG00000015670	SF3B5	99	90.588	Sarcophilus_harrisii
ENSHCOG00000009115	-	100	94.186	ENSSFOG00015015767	sf3b5	100	94.186	Scleropages_formosus
ENSHCOG00000009115	-	100	97.674	ENSSMAG00000018852	sf3b5	100	97.674	Scophthalmus_maximus
ENSHCOG00000009115	-	100	98.837	ENSSDUG00000018161	sf3b5	100	98.837	Seriola_dumerili
ENSHCOG00000009115	-	100	98.837	ENSSLDG00000014547	sf3b5	100	98.837	Seriola_lalandi_dorsalis
ENSHCOG00000009115	-	99	91.765	ENSSARG00000007820	SF3B5	99	91.765	Sorex_araneus
ENSHCOG00000009115	-	100	97.674	ENSSPAG00000009244	sf3b5	100	97.674	Stegastes_partitus
ENSHCOG00000009115	-	100	97.674	ENSSPAG00000017371	-	100	97.674	Stegastes_partitus
ENSHCOG00000009115	-	99	91.765	ENSSSCG00000035578	SF3B5	99	91.765	Sus_scrofa
ENSHCOG00000009115	-	100	91.860	ENSTGUG00000010810	SF3B5	100	91.860	Taeniopygia_guttata
ENSHCOG00000009115	-	100	96.512	ENSTRUG00000005577	sf3b5	100	96.512	Takifugu_rubripes
ENSHCOG00000009115	-	100	96.512	ENSTNIG00000001265	sf3b5	100	96.512	Tetraodon_nigroviridis
ENSHCOG00000009115	-	99	92.941	ENSTBEG00000003072	SF3B5	99	92.941	Tupaia_belangeri
ENSHCOG00000009115	-	99	91.765	ENSTTRG00000008817	SF3B5	99	91.765	Tursiops_truncatus
ENSHCOG00000009115	-	99	91.765	ENSUAMG00000027296	SF3B5	99	91.765	Ursus_americanus
ENSHCOG00000009115	-	99	91.765	ENSUMAG00000005448	SF3B5	99	91.765	Ursus_maritimus
ENSHCOG00000009115	-	99	91.765	ENSVPAG00000003826	SF3B5	99	91.765	Vicugna_pacos
ENSHCOG00000009115	-	99	91.765	ENSVVUG00000004703	SF3B5	99	91.765	Vulpes_vulpes
ENSHCOG00000009115	-	100	94.186	ENSXETG00000021409	sf3b5	100	94.186	Xenopus_tropicalis
ENSHCOG00000009115	-	100	98.837	ENSXMAG00000019971	sf3b5	100	98.837	Xiphophorus_maculatus