EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000009133 (Gene tree)
Gene ID: 109531275
Gene Symbol: zgc:101559
Alias: -
Full Name: ras-related protein Rab-33B-like
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 2891 bases
Position: chrKV880436.1:11335-14225
Accession: 109531275
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000007194	MMR_HSR1	PF01926.23	5.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000002413	-	1676	XM_019895482	ENSHCOP00000007194	236 (aa)	XP_019751041	UPI00094F11E8

Gene Model

Click here to download ENSHCOG00000009133's gene model file

Pathways

Pathway ID	Pathway Name	Source
hcq04140	Autophagy - animal	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000009133's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000009133	zgc:101559	62	44.218	ENSHCOG00000017086	RAB15	68	44.218
ENSHCOG00000009133	zgc:101559	76	42.778	ENSHCOG00000006538	si:dkey-16l2.16	85	41.667
ENSHCOG00000009133	zgc:101559	64	44.079	ENSHCOG00000004404	rab41	71	44.079
ENSHCOG00000009133	zgc:101559	70	40.237	ENSHCOG00000015692	si:dkey-34d22.5	76	40.237
ENSHCOG00000009133	zgc:101559	71	38.690	ENSHCOG00000001145	rab22a	84	38.690
ENSHCOG00000009133	zgc:101559	71	39.521	ENSHCOG00000019224	rab14	75	39.521
ENSHCOG00000009133	zgc:101559	65	35.669	ENSHCOG00000004086	rab9a	77	35.669
ENSHCOG00000009133	zgc:101559	72	45.294	ENSHCOG00000019468	rab1ba	81	45.833
ENSHCOG00000009133	zgc:101559	94	58.108	ENSHCOG00000004726	rab33a	87	60.000
ENSHCOG00000009133	zgc:101559	64	40.789	ENSHCOG00000013130	rab6bb	72	40.789
ENSHCOG00000009133	zgc:101559	63	43.243	ENSHCOG00000002217	rab18b	71	43.243
ENSHCOG00000009133	zgc:101559	76	38.333	ENSHCOG00000000232	rab11al	82	38.333
ENSHCOG00000009133	zgc:101559	50	30.000	ENSHCOG00000008536	-	58	30.000
ENSHCOG00000009133	zgc:101559	64	40.132	ENSHCOG00000014711	rab6ba	72	40.132
ENSHCOG00000009133	zgc:101559	72	45.882	ENSHCOG00000001137	rab1ab	87	43.784
ENSHCOG00000009133	zgc:101559	74	33.908	ENSHCOG00000011080	kras	89	33.908
ENSHCOG00000009133	zgc:101559	63	39.474	ENSHCOG00000005802	RAB9A	71	39.474
ENSHCOG00000009133	zgc:101559	72	40.936	ENSHCOG00000004662	rab5c	74	40.936
ENSHCOG00000009133	zgc:101559	62	34.228	ENSHCOG00000003667	rhebl1	79	34.228
ENSHCOG00000009133	zgc:101559	72	39.766	ENSHCOG00000020238	-	76	39.766
ENSHCOG00000009133	zgc:101559	75	35.859	ENSHCOG00000005024	rab9b	97	35.859
ENSHCOG00000009133	zgc:101559	81	35.938	ENSHCOG00000013095	rab25a	90	35.938
ENSHCOG00000009133	zgc:101559	70	41.916	ENSHCOG00000003981	RAB39B	77	41.916
ENSHCOG00000009133	zgc:101559	84	38.278	ENSHCOG00000016322	RAB7A	97	38.278
ENSHCOG00000009133	zgc:101559	67	31.481	ENSHCOG00000013468	rab20	59	31.481
ENSHCOG00000009133	zgc:101559	77	38.674	ENSHCOG00000005652	rab11a	83	38.674
ENSHCOG00000009133	zgc:101559	71	40.120	ENSHCOG00000013180	-	75	40.120
ENSHCOG00000009133	zgc:101559	73	32.948	ENSHCOG00000009757	ran	76	32.370
ENSHCOG00000009133	zgc:101559	73	34.682	ENSHCOG00000018456	si:ch73-116o1.2	81	34.682
ENSHCOG00000009133	zgc:101559	80	37.696	ENSHCOG00000007187	rab25b	80	37.696
ENSHCOG00000009133	zgc:101559	76	63.102	ENSHCOG00000003569	rab33ba	78	63.102
ENSHCOG00000009133	zgc:101559	64	42.763	ENSHCOG00000006550	-	72	42.763
ENSHCOG00000009133	zgc:101559	65	43.506	ENSHCOG00000014428	rab2a	72	43.506
ENSHCOG00000009133	zgc:101559	69	40.828	ENSHCOG00000004225	-	80	40.828
ENSHCOG00000009133	zgc:101559	71	31.111	ENSHCOG00000019709	rasl11a	70	31.461
ENSHCOG00000009133	zgc:101559	58	35.294	ENSHCOG00000013919	rab23	71	35.811
ENSHCOG00000009133	zgc:101559	63	40.940	ENSHCOG00000017123	-	68	40.940
ENSHCOG00000009133	zgc:101559	69	43.902	ENSHCOG00000007440	rab13	87	43.902
ENSHCOG00000009133	zgc:101559	62	33.784	ENSHCOG00000013807	rheb	79	33.784
ENSHCOG00000009133	zgc:101559	72	45.882	ENSHCOG00000010023	-	80	46.429
ENSHCOG00000009133	zgc:101559	73	39.884	ENSHCOG00000012376	rab12	70	39.429
ENSHCOG00000009133	zgc:101559	73	41.040	ENSHCOG00000002423	rab11bb	78	41.040
ENSHCOG00000009133	zgc:101559	65	43.871	ENSHCOG00000019732	-	72	43.871
ENSHCOG00000009133	zgc:101559	92	47.414	ENSHCOG00000012834	-	92	47.926
ENSHCOG00000009133	zgc:101559	73	40.462	ENSHCOG00000000985	-	78	40.462
ENSHCOG00000009133	zgc:101559	73	41.040	ENSHCOG00000000954	-	80	40.351

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000009133	zgc:101559	100	78.992	ENSAPOG00000007503	zgc:101559	100	77.542	Acanthochromis_polyacanthus
ENSHCOG00000009133	zgc:101559	87	82.609	ENSACIG00000021459	zgc:101559	89	80.976	Amphilophus_citrinellus
ENSHCOG00000009133	zgc:101559	100	78.992	ENSAOCG00000024675	zgc:101559	100	77.542	Amphiprion_ocellaris
ENSHCOG00000009133	zgc:101559	100	78.992	ENSAPEG00000005176	zgc:101559	100	77.542	Amphiprion_percula
ENSHCOG00000009133	zgc:101559	100	76.891	ENSATEG00000007761	zgc:101559	100	75.424	Anabas_testudineus
ENSHCOG00000009133	zgc:101559	97	78.448	ENSACLG00000027006	zgc:101559	97	76.957	Astatotilapia_calliptera
ENSHCOG00000009133	zgc:101559	92	72.646	ENSAMXG00000040460	zgc:101559	87	72.811	Astyanax_mexicanus
ENSHCOG00000009133	zgc:101559	100	75.210	ENSCSEG00000006243	zgc:101559	100	74.153	Cynoglossus_semilaevis
ENSHCOG00000009133	zgc:101559	100	77.731	ENSCVAG00000019227	zgc:101559	100	75.949	Cyprinodon_variegatus
ENSHCOG00000009133	zgc:101559	100	69.915	ENSDARG00000003257	zgc:101559	100	69.915	Danio_rerio
ENSHCOG00000009133	zgc:101559	100	76.471	ENSFHEG00000011483	zgc:101559	100	75.000	Fundulus_heteroclitus
ENSHCOG00000009133	zgc:101559	91	77.209	ENSGMOG00000011665	zgc:101559	100	77.209	Gadus_morhua
ENSHCOG00000009133	zgc:101559	100	76.471	ENSGAFG00000021202	zgc:101559	100	74.576	Gambusia_affinis
ENSHCOG00000009133	zgc:101559	91	78.140	ENSGACG00000001725	zgc:101559	91	77.674	Gasterosteus_aculeatus
ENSHCOG00000009133	zgc:101559	100	78.151	ENSHBUG00000007827	zgc:101559	100	76.695	Haplochromis_burtoni
ENSHCOG00000009133	zgc:101559	100	66.949	ENSIPUG00000022394	zgc:101559	88	72.683	Ictalurus_punctatus
ENSHCOG00000009133	zgc:101559	100	75.210	ENSKMAG00000002862	zgc:101559	100	73.729	Kryptolebias_marmoratus
ENSHCOG00000009133	zgc:101559	100	77.731	ENSLBEG00000025798	zgc:101559	100	76.271	Labrus_bergylta
ENSHCOG00000009133	zgc:101559	75	70.621	ENSLACG00000011557	zgc:101559	77	70.621	Latimeria_chalumnae
ENSHCOG00000009133	zgc:101559	85	76.000	ENSLOCG00000005904	zgc:101559	84	76.000	Lepisosteus_oculatus
ENSHCOG00000009133	zgc:101559	100	78.151	ENSMAMG00000017431	zgc:101559	100	76.695	Mastacembelus_armatus
ENSHCOG00000009133	zgc:101559	100	78.151	ENSMZEG00005021778	zgc:101559	100	76.695	Maylandia_zebra
ENSHCOG00000009133	zgc:101559	100	75.210	ENSMMOG00000019779	zgc:101559	100	73.729	Mola_mola
ENSHCOG00000009133	zgc:101559	100	76.050	ENSMALG00000003712	zgc:101559	100	74.576	Monopterus_albus
ENSHCOG00000009133	zgc:101559	100	77.731	ENSNBRG00000002684	zgc:101559	100	76.271	Neolamprologus_brichardi
ENSHCOG00000009133	zgc:101559	100	78.151	ENSONIG00000006715	-	100	76.695	Oreochromis_niloticus
ENSHCOG00000009133	zgc:101559	100	76.050	ENSORLG00000030642	zgc:101559	100	75.000	Oryzias_latipes
ENSHCOG00000009133	zgc:101559	100	75.630	ENSORLG00020012685	zgc:101559	100	74.576	Oryzias_latipes_hni
ENSHCOG00000009133	zgc:101559	100	76.050	ENSORLG00015016047	zgc:101559	100	75.000	Oryzias_latipes_hsok
ENSHCOG00000009133	zgc:101559	100	77.311	ENSOMEG00000013128	zgc:101559	100	75.847	Oryzias_melastigma
ENSHCOG00000009133	zgc:101559	85	74.500	ENSPKIG00000013397	zgc:101559	84	74.500	Paramormyrops_kingsleyae
ENSHCOG00000009133	zgc:101559	100	76.050	ENSPFOG00000009101	-	100	74.576	Poecilia_formosa
ENSHCOG00000009133	zgc:101559	100	76.050	ENSPLAG00000020627	zgc:101559	100	74.576	Poecilia_latipinna
ENSHCOG00000009133	zgc:101559	100	77.311	ENSPMEG00000010152	zgc:101559	100	75.424	Poecilia_mexicana
ENSHCOG00000009133	zgc:101559	100	76.471	ENSPREG00000007017	zgc:101559	100	74.684	Poecilia_reticulata
ENSHCOG00000009133	zgc:101559	100	78.151	ENSPNYG00000012922	zgc:101559	100	76.695	Pundamilia_nyererei
ENSHCOG00000009133	zgc:101559	99	69.658	ENSPNAG00000017856	zgc:101559	100	69.658	Pygocentrus_nattereri
ENSHCOG00000009133	zgc:101559	99	66.239	ENSSFOG00015006175	zgc:101559	86	74.500	Scleropages_formosus
ENSHCOG00000009133	zgc:101559	99	76.371	ENSSMAG00000002229	zgc:101559	99	75.745	Scophthalmus_maximus
ENSHCOG00000009133	zgc:101559	100	78.571	ENSSDUG00000008151	zgc:101559	100	77.119	Seriola_dumerili
ENSHCOG00000009133	zgc:101559	100	78.571	ENSSLDG00000019214	zgc:101559	100	77.119	Seriola_lalandi_dorsalis
ENSHCOG00000009133	zgc:101559	100	80.672	ENSSPAG00000006404	zgc:101559	100	79.237	Stegastes_partitus
ENSHCOG00000009133	zgc:101559	100	73.950	ENSTRUG00000009903	zgc:101559	100	72.458	Takifugu_rubripes
ENSHCOG00000009133	zgc:101559	92	76.147	ENSTNIG00000015000	zgc:101559	89	76.555	Tetraodon_nigroviridis
ENSHCOG00000009133	zgc:101559	100	76.471	ENSXCOG00000018683	zgc:101559	100	74.153	Xiphophorus_couchianus
ENSHCOG00000009133	zgc:101559	100	76.891	ENSXMAG00000011171	zgc:101559	100	74.576	Xiphophorus_maculatus