EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000009209 (Gene tree)
Gene ID: -
Gene Symbol: gatc
Alias: si:rp71-1c23.3
Full Name: glutamyl-tRNA(Gln) amidotransferase subunit C%2C mitochondrial-like
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 6228 bases
Position: chrKV879800.1:3685751-3691978
Accession: 109511640
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000021944	Glu-tRNAGln	PF02686.15	8e-08	1	1
ENSHCOP00000007179	Glu-tRNAGln	PF02686.15	9.9e-08	1	1
ENSHCOP00000007188	Glu-tRNAGln	PF02686.15	1e-07	1	1
ENSHCOP00000021911	Glu-tRNAGln	PF02686.15	1.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000002411	-	396	-	ENSHCOP00000021911	131 (aa)	-	-
ENSHCOT00000002431	-	369	-	ENSHCOP00000007188	122 (aa)	-	-
ENSHCOT00000002450	-	381	XM_019862866	ENSHCOP00000007179	126 (aa)	XP_019718425	-
ENSHCOT00000002337	-	381	-	ENSHCOP00000021944	126 (aa)	-	-

Gene Model

Click here to download ENSHCOG00000009209's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000009209's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000009209	gatc	90	55.906	ENSG00000257218	GATC	100	70.213	Homo_sapiens
ENSHCOG00000009209	gatc	88	56.780	ENSAMEG00000013298	-	87	56.780	Ailuropoda_melanoleuca
ENSHCOG00000009209	gatc	80	75.510	ENSACIG00000016853	gatc	75	72.115	Amphilophus_citrinellus
ENSHCOG00000009209	gatc	96	80.488	ENSAOCG00000014641	gatc	98	80.488	Amphiprion_ocellaris
ENSHCOG00000009209	gatc	100	78.125	ENSAPEG00000023411	gatc	66	78.125	Amphiprion_percula
ENSHCOG00000009209	gatc	80	80.412	ENSATEG00000009237	gatc	79	82.105	Anabas_testudineus
ENSHCOG00000009209	gatc	88	65.766	ENSACAG00000002868	-	81	65.766	Anolis_carolinensis
ENSHCOG00000009209	gatc	90	56.693	ENSANAG00000034389	-	93	56.693	Aotus_nancymaae
ENSHCOG00000009209	gatc	100	79.688	ENSACLG00000026251	gatc	67	79.688	Astatotilapia_calliptera
ENSHCOG00000009209	gatc	100	78.125	ENSAMXG00000004252	gatc	56	78.125	Astyanax_mexicanus
ENSHCOG00000009209	gatc	83	56.250	ENSBTAG00000012791	GATC	82	56.250	Bos_taurus
ENSHCOG00000009209	gatc	84	37.963	WBGene00013433	Y66D12A.7	62	37.963	Caenorhabditis_elegans
ENSHCOG00000009209	gatc	85	60.526	ENSCJAG00000001183	-	63	60.526	Callithrix_jacchus
ENSHCOG00000009209	gatc	88	56.780	ENSCAFG00000010311	-	87	56.780	Canis_familiaris
ENSHCOG00000009209	gatc	88	56.780	ENSCAFG00020020606	-	87	56.780	Canis_lupus_dingo
ENSHCOG00000009209	gatc	88	55.085	ENSCHIG00000019423	-	87	55.085	Capra_hircus
ENSHCOG00000009209	gatc	83	59.821	ENSTSYG00000006845	-	82	59.821	Carlito_syrichta
ENSHCOG00000009209	gatc	78	61.224	ENSCPOG00000026436	-	68	61.000	Cavia_porcellus
ENSHCOG00000009209	gatc	85	60.526	ENSCCAG00000022235	-	84	60.526	Cebus_capucinus
ENSHCOG00000009209	gatc	90	55.906	ENSCATG00000038807	GATC	93	55.906	Cercocebus_atys
ENSHCOG00000009209	gatc	83	60.577	ENSCLAG00000011015	-	64	60.577	Chinchilla_lanigera
ENSHCOG00000009209	gatc	90	56.693	ENSCSAG00000002259	GATC	93	56.693	Chlorocebus_sabaeus
ENSHCOG00000009209	gatc	78	65.306	ENSCHOG00000009235	-	72	65.306	Choloepus_hoffmanni
ENSHCOG00000009209	gatc	95	59.836	ENSCPBG00000011342	-	65	59.836	Chrysemys_picta_bellii
ENSHCOG00000009209	gatc	83	59.821	ENSCANG00000031071	GATC	82	59.821	Colobus_angolensis_palliatus
ENSHCOG00000009209	gatc	73	64.130	ENSCGRG00001019220	-	59	64.130	Cricetulus_griseus_chok1gshd
ENSHCOG00000009209	gatc	73	64.130	ENSCGRG00000004184	-	59	64.130	Cricetulus_griseus_crigri
ENSHCOG00000009209	gatc	98	73.810	ENSCSEG00000007798	gatc	63	73.810	Cynoglossus_semilaevis
ENSHCOG00000009209	gatc	87	73.636	ENSCSEG00000016618	-	64	73.636	Cynoglossus_semilaevis
ENSHCOG00000009209	gatc	100	78.906	ENSCVAG00000004364	gatc	68	78.906	Cyprinodon_variegatus
ENSHCOG00000009209	gatc	100	73.438	ENSDARG00000056855	gatc	70	73.438	Danio_rerio
ENSHCOG00000009209	gatc	85	59.813	ENSDNOG00000012593	-	58	59.184	Dasypus_novemcinctus
ENSHCOG00000009209	gatc	67	47.059	FBgn0064115	GatC	57	47.059	Drosophila_melanogaster
ENSHCOG00000009209	gatc	95	49.587	ENSETEG00000002604	-	88	49.587	Echinops_telfairi
ENSHCOG00000009209	gatc	69	48.810	ENSEBUG00000008772	gatc	56	45.361	Eptatretus_burgeri
ENSHCOG00000009209	gatc	83	60.714	ENSECAG00000011118	-	82	60.714	Equus_caballus
ENSHCOG00000009209	gatc	77	61.856	ENSEEUG00000011638	-	72	61.856	Erinaceus_europaeus
ENSHCOG00000009209	gatc	92	70.492	ENSELUG00000012608	gatc	75	74.757	Esox_lucius
ENSHCOG00000009209	gatc	88	56.780	ENSFCAG00000038718	-	87	56.780	Felis_catus
ENSHCOG00000009209	gatc	91	59.130	ENSFALG00000007564	-	78	57.627	Ficedula_albicollis
ENSHCOG00000009209	gatc	87	62.385	ENSFDAG00000018720	-	79	62.385	Fukomys_damarensis
ENSHCOG00000009209	gatc	100	79.688	ENSFHEG00000014992	GATC	69	79.688	Fundulus_heteroclitus
ENSHCOG00000009209	gatc	100	71.654	ENSGMOG00000008742	gatc	79	71.654	Gadus_morhua
ENSHCOG00000009209	gatc	87	60.550	ENSGALG00000007195	-	79	60.000	Gallus_gallus
ENSHCOG00000009209	gatc	87	75.455	ENSGAFG00000012801	gatc	70	75.455	Gambusia_affinis
ENSHCOG00000009209	gatc	100	79.688	ENSGACG00000008973	gatc	66	79.688	Gasterosteus_aculeatus
ENSHCOG00000009209	gatc	95	61.475	ENSGAGG00000016018	-	66	61.475	Gopherus_agassizii
ENSHCOG00000009209	gatc	84	54.622	ENSGGOG00000026821	GATC	92	54.622	Gorilla_gorilla
ENSHCOG00000009209	gatc	100	81.250	ENSHBUG00000006827	gatc	67	81.250	Haplochromis_burtoni
ENSHCOG00000009209	gatc	84	64.151	ENSHGLG00000011394	GATC	77	64.151	Heterocephalus_glaber_female
ENSHCOG00000009209	gatc	84	62.264	ENSHGLG00100018850	-	77	62.264	Heterocephalus_glaber_male
ENSHCOG00000009209	gatc	100	77.344	ENSIPUG00000023072	gatc	60	77.344	Ictalurus_punctatus
ENSHCOG00000009209	gatc	90	55.906	ENSSTOG00000025740	-	83	55.906	Ictidomys_tridecemlineatus
ENSHCOG00000009209	gatc	74	65.591	ENSJJAG00000000369	Gatc	59	65.591	Jaculus_jaculus
ENSHCOG00000009209	gatc	100	76.984	ENSKMAG00000016476	gatc	98	76.984	Kryptolebias_marmoratus
ENSHCOG00000009209	gatc	100	75.000	ENSLBEG00000007603	gatc	71	75.000	Labrus_bergylta
ENSHCOG00000009209	gatc	96	56.911	ENSLACG00000018239	-	64	56.911	Latimeria_chalumnae
ENSHCOG00000009209	gatc	100	71.875	ENSLOCG00000004056	gatc	69	71.875	Lepisosteus_oculatus
ENSHCOG00000009209	gatc	78	64.286	ENSLAFG00000006384	-	63	64.286	Loxodonta_africana
ENSHCOG00000009209	gatc	90	55.906	ENSMFAG00000034197	GATC	93	55.906	Macaca_fascicularis
ENSHCOG00000009209	gatc	90	55.906	ENSMMUG00000046665	GATC	93	55.906	Macaca_mulatta
ENSHCOG00000009209	gatc	90	55.906	ENSMNEG00000034653	GATC	93	55.906	Macaca_nemestrina
ENSHCOG00000009209	gatc	90	56.693	ENSMLEG00000039862	GATC	93	56.693	Mandrillus_leucophaeus
ENSHCOG00000009209	gatc	100	81.250	ENSMAMG00000015851	gatc	70	81.250	Mastacembelus_armatus
ENSHCOG00000009209	gatc	100	79.688	ENSMZEG00005016072	gatc	67	79.688	Maylandia_zebra
ENSHCOG00000009209	gatc	87	60.550	ENSMGAG00000008733	-	99	61.905	Meleagris_gallopavo
ENSHCOG00000009209	gatc	73	65.217	ENSMAUG00000012756	Gatc	65	60.000	Mesocricetus_auratus
ENSHCOG00000009209	gatc	83	61.607	ENSMICG00000008669	-	82	61.607	Microcebus_murinus
ENSHCOG00000009209	gatc	73	66.304	ENSMOCG00000005051	Gatc	59	66.304	Microtus_ochrogaster
ENSHCOG00000009209	gatc	97	72.131	ENSMMOG00000017695	gatc	100	72.131	Mola_mola
ENSHCOG00000009209	gatc	88	59.459	ENSMODG00000003152	-	83	59.459	Monodelphis_domestica
ENSHCOG00000009209	gatc	82	60.194	MGP_CAROLIEiJ_G0027623	Gatc	65	60.194	Mus_caroli
ENSHCOG00000009209	gatc	82	60.194	ENSMUSG00000029536	Gatc	65	60.194	Mus_musculus
ENSHCOG00000009209	gatc	82	61.165	MGP_PahariEiJ_G0024203	Gatc	65	61.165	Mus_pahari
ENSHCOG00000009209	gatc	82	60.194	MGP_SPRETEiJ_G0028621	Gatc	65	60.194	Mus_spretus
ENSHCOG00000009209	gatc	88	57.627	ENSMPUG00000003183	-	87	57.627	Mustela_putorius_furo
ENSHCOG00000009209	gatc	75	61.053	ENSMLUG00000010341	-	94	61.053	Myotis_lucifugus
ENSHCOG00000009209	gatc	72	68.182	ENSNGAG00000004734	Gatc	60	67.033	Nannospalax_galili
ENSHCOG00000009209	gatc	100	81.250	ENSNBRG00000007810	gatc	67	81.250	Neolamprologus_brichardi
ENSHCOG00000009209	gatc	83	59.821	ENSNLEG00000015651	GATC	82	59.821	Nomascus_leucogenys
ENSHCOG00000009209	gatc	80	60.396	ENSMEUG00000004064	-	83	59.223	Notamacropus_eugenii
ENSHCOG00000009209	gatc	83	62.617	ENSOPRG00000004226	-	79	62.617	Ochotona_princeps
ENSHCOG00000009209	gatc	78	61.224	ENSODEG00000005919	-	72	61.224	Octodon_degus
ENSHCOG00000009209	gatc	100	79.231	ENSONIG00000013444	gatc	90	79.231	Oreochromis_niloticus
ENSHCOG00000009209	gatc	80	65.347	ENSOCUG00000009867	-	74	65.347	Oryctolagus_cuniculus
ENSHCOG00000009209	gatc	94	74.380	ENSORLG00000007156	gatc	100	74.380	Oryzias_latipes
ENSHCOG00000009209	gatc	100	73.438	ENSORLG00020014991	gatc	68	73.438	Oryzias_latipes_hni
ENSHCOG00000009209	gatc	100	73.438	ENSORLG00015003450	gatc	68	73.438	Oryzias_latipes_hsok
ENSHCOG00000009209	gatc	100	74.219	ENSOMEG00000002280	gatc	68	74.219	Oryzias_melastigma
ENSHCOG00000009209	gatc	82	64.078	ENSOGAG00000003850	-	94	64.078	Otolemur_garnettii
ENSHCOG00000009209	gatc	83	59.615	ENSOARG00000012338	-	89	55.652	Ovis_aries
ENSHCOG00000009209	gatc	90	55.118	ENSPPAG00000029164	GATC	93	55.118	Pan_paniscus
ENSHCOG00000009209	gatc	88	56.780	ENSPPRG00000000929	-	87	56.780	Panthera_pardus
ENSHCOG00000009209	gatc	88	56.780	ENSPTIG00000009889	-	87	56.780	Panthera_tigris_altaica
ENSHCOG00000009209	gatc	90	56.349	ENSPTRG00000049887	GATC	93	56.349	Pan_troglodytes
ENSHCOG00000009209	gatc	90	55.118	ENSPANG00000033975	GATC	93	55.118	Papio_anubis
ENSHCOG00000009209	gatc	100	66.406	ENSPKIG00000024856	gatc	66	66.406	Paramormyrops_kingsleyae
ENSHCOG00000009209	gatc	87	64.545	ENSPSIG00000011112	-	94	64.545	Pelodiscus_sinensis
ENSHCOG00000009209	gatc	96	80.488	ENSPMGG00000018829	gatc	78	80.488	Periophthalmus_magnuspinnatus
ENSHCOG00000009209	gatc	73	67.391	ENSPEMG00000000665	Gatc	59	67.391	Peromyscus_maniculatus_bairdii
ENSHCOG00000009209	gatc	74	64.516	ENSPCIG00000025999	-	60	64.516	Phascolarctos_cinereus
ENSHCOG00000009209	gatc	100	78.125	ENSPFOG00000011603	gatc	69	78.125	Poecilia_formosa
ENSHCOG00000009209	gatc	100	78.125	ENSPLAG00000002471	gatc	69	78.125	Poecilia_latipinna
ENSHCOG00000009209	gatc	100	77.344	ENSPMEG00000020958	gatc	69	77.344	Poecilia_mexicana
ENSHCOG00000009209	gatc	84	84.906	ENSPREG00000022256	gatc	72	84.906	Poecilia_reticulata
ENSHCOG00000009209	gatc	96	55.224	ENSPPYG00000005030	GATC	98	55.224	Pongo_abelii
ENSHCOG00000009209	gatc	85	61.682	ENSPCAG00000013864	-	85	55.172	Procavia_capensis
ENSHCOG00000009209	gatc	72	65.909	ENSPCOG00000009493	-	79	60.784	Propithecus_coquereli
ENSHCOG00000009209	gatc	84	52.336	ENSPCOG00000015558	-	83	52.336	Propithecus_coquereli
ENSHCOG00000009209	gatc	80	61.111	ENSPVAG00000002228	-	80	61.111	Pteropus_vampyrus
ENSHCOG00000009209	gatc	100	80.469	ENSPNYG00000016015	gatc	67	80.469	Pundamilia_nyererei
ENSHCOG00000009209	gatc	100	74.219	ENSPNAG00000001239	gatc	57	74.219	Pygocentrus_nattereri
ENSHCOG00000009209	gatc	82	62.136	ENSRNOG00000001161	Gatc	65	62.136	Rattus_norvegicus
ENSHCOG00000009209	gatc	80	59.406	ENSRNOG00000045621	Gatc	65	59.406	Rattus_norvegicus
ENSHCOG00000009209	gatc	79	63.636	ENSRBIG00000033363	GATC	73	63.636	Rhinopithecus_bieti
ENSHCOG00000009209	gatc	79	63.636	ENSRROG00000042802	GATC	73	63.636	Rhinopithecus_roxellana
ENSHCOG00000009209	gatc	85	58.772	ENSSBOG00000033750	-	84	58.772	Saimiri_boliviensis_boliviensis
ENSHCOG00000009209	gatc	83	59.615	ENSSHAG00000005745	-	98	59.615	Sarcophilus_harrisii
ENSHCOG00000009209	gatc	98	68.000	ENSSFOG00015002508	gatc	69	70.642	Scleropages_formosus
ENSHCOG00000009209	gatc	100	82.031	ENSSMAG00000014280	gatc	71	82.031	Scophthalmus_maximus
ENSHCOG00000009209	gatc	100	80.469	ENSSDUG00000012206	gatc	66	80.469	Seriola_dumerili
ENSHCOG00000009209	gatc	100	81.250	ENSSLDG00000025159	gatc	65	81.250	Seriola_lalandi_dorsalis
ENSHCOG00000009209	gatc	94	55.000	ENSSPUG00000015693	-	76	60.952	Sphenodon_punctatus
ENSHCOG00000009209	gatc	100	78.906	ENSSPAG00000011860	gatc	67	78.906	Stegastes_partitus
ENSHCOG00000009209	gatc	89	57.522	ENSSSCG00000032747	-	74	63.725	Sus_scrofa
ENSHCOG00000009209	gatc	83	63.810	ENSTGUG00000009561	-	97	63.810	Taeniopygia_guttata
ENSHCOG00000009209	gatc	100	77.344	ENSTRUG00000021596	gatc	65	77.344	Takifugu_rubripes
ENSHCOG00000009209	gatc	100	78.125	ENSTNIG00000015879	gatc	62	78.125	Tetraodon_nigroviridis
ENSHCOG00000009209	gatc	78	66.327	ENSTTRG00000000144	GATC	72	66.327	Tursiops_truncatus
ENSHCOG00000009209	gatc	88	57.627	ENSUAMG00000015523	-	87	57.627	Ursus_americanus
ENSHCOG00000009209	gatc	88	56.780	ENSVVUG00000021055	-	87	56.780	Vulpes_vulpes
ENSHCOG00000009209	gatc	84	83.962	ENSXCOG00000017087	gatc	81	80.180	Xiphophorus_couchianus
ENSHCOG00000009209	gatc	100	75.781	ENSXMAG00000018267	gatc	69	75.781	Xiphophorus_maculatus