EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000009446 (Gene tree)
Gene ID: 109522518
Gene Symbol: gnl3
Alias: id:ibd2914|nstm|nucleostemin|wu:fb38a04|wu:fc55d07|zgc:123093
Full Name: G protein nucleolar 3
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 5436 bases
Position: chrKV880150.1:2906768-2912203
Accession: 109522518
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000007425	GN3L_Grn1	PF08701.11	2.3e-23	1	1
ENSHCOP00000007428	GN3L_Grn1	PF08701.11	1.4e-18	1	1
ENSHCOP00000007428	MMR_HSR1	PF01926.23	7.1e-16	1	1
ENSHCOP00000007425	MMR_HSR1	PF01926.23	7.8e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000002013	-	3026	XM_019881165	ENSHCOP00000007425	558 (aa)	XP_019736724	-
ENSHCOT00000002008	-	3304	-	ENSHCOP00000007428	531 (aa)	-	-

Gene Model

Click here to download ENSHCOG00000009446's gene model file

Pathways

Pathway ID	Pathway Name	Source
hcq03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000009446's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000009446	gnl3	83	38.852	ENSHCOG00000009877	gnl3l	63	43.228

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000009446	gnl3	99	43.828	ENSG00000163938	GNL3	100	48.921	Homo_sapiens
ENSHCOG00000009446	gnl3	99	63.958	ENSAPOG00000004048	gnl3	99	64.349	Acanthochromis_polyacanthus
ENSHCOG00000009446	gnl3	99	41.593	ENSAMEG00000008456	GNL3	99	40.246	Ailuropoda_melanoleuca
ENSHCOG00000009446	gnl3	99	61.343	ENSACIG00000000545	gnl3	99	60.323	Amphilophus_citrinellus
ENSHCOG00000009446	gnl3	99	63.036	ENSAOCG00000012879	gnl3	99	63.063	Amphiprion_ocellaris
ENSHCOG00000009446	gnl3	99	63.036	ENSAPEG00000006146	gnl3	99	63.063	Amphiprion_percula
ENSHCOG00000009446	gnl3	99	63.964	ENSATEG00000024242	gnl3	99	63.327	Anabas_testudineus
ENSHCOG00000009446	gnl3	85	45.833	ENSAPLG00000005171	GNL3	100	41.877	Anas_platyrhynchos
ENSHCOG00000009446	gnl3	99	45.455	ENSACAG00000007357	GNL3	99	45.438	Anolis_carolinensis
ENSHCOG00000009446	gnl3	99	43.345	ENSANAG00000033209	GNL3	99	42.190	Aotus_nancymaae
ENSHCOG00000009446	gnl3	99	61.343	ENSACLG00000007381	gnl3	99	61.162	Astatotilapia_calliptera
ENSHCOG00000009446	gnl3	99	46.924	ENSAMXG00000020880	gnl3	99	47.811	Astyanax_mexicanus
ENSHCOG00000009446	gnl3	99	42.288	ENSBTAG00000014549	GNL3	99	42.527	Bos_taurus
ENSHCOG00000009446	gnl3	99	44.043	ENSCJAG00000006864	-	99	43.088	Callithrix_jacchus
ENSHCOG00000009446	gnl3	99	44.043	ENSCJAG00000044256	-	99	43.088	Callithrix_jacchus
ENSHCOG00000009446	gnl3	86	44.606	ENSCAFG00000009004	GNL3	99	40.845	Canis_familiaris
ENSHCOG00000009446	gnl3	86	44.813	ENSCAFG00020002613	GNL3	89	43.416	Canis_lupus_dingo
ENSHCOG00000009446	gnl3	99	41.783	ENSCHIG00000022181	GNL3	99	41.889	Capra_hircus
ENSHCOG00000009446	gnl3	99	42.190	ENSTSYG00000006851	GNL3	99	41.187	Carlito_syrichta
ENSHCOG00000009446	gnl3	99	41.030	ENSCPOG00000000282	GNL3	87	42.797	Cavia_porcellus
ENSHCOG00000009446	gnl3	99	43.863	ENSCCAG00000033281	GNL3	99	42.908	Cebus_capucinus
ENSHCOG00000009446	gnl3	99	43.649	ENSCATG00000040886	GNL3	100	41.772	Cercocebus_atys
ENSHCOG00000009446	gnl3	99	41.219	ENSCLAG00000010109	-	99	40.357	Chinchilla_lanigera
ENSHCOG00000009446	gnl3	99	43.292	ENSCSAG00000013315	GNL3	99	42.171	Chlorocebus_sabaeus
ENSHCOG00000009446	gnl3	99	40.070	ENSCHOG00000002726	GNL3	84	42.857	Choloepus_hoffmanni
ENSHCOG00000009446	gnl3	80	42.094	ENSCPBG00000018330	-	96	41.814	Chrysemys_picta_bellii
ENSHCOG00000009446	gnl3	100	42.007	ENSCANG00000039969	GNL3	100	41.591	Colobus_angolensis_palliatus
ENSHCOG00000009446	gnl3	99	41.593	ENSCGRG00001020950	Gnl3	87	43.685	Cricetulus_griseus_chok1gshd
ENSHCOG00000009446	gnl3	99	41.593	ENSCGRG00000015225	Gnl3	87	43.685	Cricetulus_griseus_crigri
ENSHCOG00000009446	gnl3	99	59.313	ENSCSEG00000005009	gnl3	99	58.951	Cynoglossus_semilaevis
ENSHCOG00000009446	gnl3	99	62.298	ENSCVAG00000010679	gnl3	99	62.206	Cyprinodon_variegatus
ENSHCOG00000009446	gnl3	99	50.266	ENSDARG00000006219	gnl3	99	51.839	Danio_rerio
ENSHCOG00000009446	gnl3	99	42.349	ENSDNOG00000001037	GNL3	99	41.459	Dasypus_novemcinctus
ENSHCOG00000009446	gnl3	99	41.802	ENSDORG00000000674	Gnl3	99	41.103	Dipodomys_ordii
ENSHCOG00000009446	gnl3	87	75.000	ENSETEG00000016534	-	74	75.000	Echinops_telfairi
ENSHCOG00000009446	gnl3	99	42.403	ENSEASG00005014636	GNL3	99	41.563	Equus_asinus_asinus
ENSHCOG00000009446	gnl3	99	42.756	ENSECAG00000014850	GNL3	99	41.711	Equus_caballus
ENSHCOG00000009446	gnl3	99	42.342	ENSEEUG00000004427	GNL3	100	41.516	Erinaceus_europaeus
ENSHCOG00000009446	gnl3	99	56.766	ENSELUG00000008767	gnl3	99	54.219	Esox_lucius
ENSHCOG00000009446	gnl3	99	42.021	ENSFCAG00000015719	GNL3	99	40.531	Felis_catus
ENSHCOG00000009446	gnl3	99	46.085	ENSFALG00000008957	GNL3	99	46.181	Ficedula_albicollis
ENSHCOG00000009446	gnl3	99	41.697	ENSFDAG00000020679	GNL3	99	41.123	Fukomys_damarensis
ENSHCOG00000009446	gnl3	99	60.398	ENSFHEG00000020897	gnl3	99	60.940	Fundulus_heteroclitus
ENSHCOG00000009446	gnl3	98	52.473	ENSGMOG00000001745	gnl3	99	51.681	Gadus_morhua
ENSHCOG00000009446	gnl3	99	42.685	ENSGALG00000001613	GNL3	83	46.407	Gallus_gallus
ENSHCOG00000009446	gnl3	99	52.000	ENSGAFG00000007184	gnl3	99	51.163	Gambusia_affinis
ENSHCOG00000009446	gnl3	99	59.246	ENSGACG00000000309	gnl3	99	60.107	Gasterosteus_aculeatus
ENSHCOG00000009446	gnl3	81	43.142	ENSGAGG00000021579	-	97	43.653	Gopherus_agassizii
ENSHCOG00000009446	gnl3	99	43.440	ENSGGOG00000011444	GNL3	99	42.349	Gorilla_gorilla
ENSHCOG00000009446	gnl3	99	63.291	ENSHBUG00000001340	gnl3	99	63.291	Haplochromis_burtoni
ENSHCOG00000009446	gnl3	99	41.489	ENSHGLG00000018299	GNL3	99	40.288	Heterocephalus_glaber_female
ENSHCOG00000009446	gnl3	99	46.486	ENSIPUG00000023677	gnl3	100	46.057	Ictalurus_punctatus
ENSHCOG00000009446	gnl3	99	42.757	ENSSTOG00000000356	GNL3	100	41.652	Ictidomys_tridecemlineatus
ENSHCOG00000009446	gnl3	99	43.486	ENSJJAG00000021993	Gnl3	99	43.617	Jaculus_jaculus
ENSHCOG00000009446	gnl3	99	61.162	ENSKMAG00000005965	gnl3	99	60.971	Kryptolebias_marmoratus
ENSHCOG00000009446	gnl3	99	63.262	ENSLBEG00000011394	gnl3	99	62.724	Labrus_bergylta
ENSHCOG00000009446	gnl3	84	49.686	ENSLACG00000001259	GNL3	84	48.033	Latimeria_chalumnae
ENSHCOG00000009446	gnl3	99	50.442	ENSLOCG00000010542	gnl3	99	49.135	Lepisosteus_oculatus
ENSHCOG00000009446	gnl3	99	41.404	ENSLAFG00000016056	GNL3	100	40.497	Loxodonta_africana
ENSHCOG00000009446	gnl3	99	42.908	ENSMFAG00000000613	GNL3	99	42.349	Macaca_fascicularis
ENSHCOG00000009446	gnl3	100	41.436	ENSMMUG00000012511	GNL3	100	41.591	Macaca_mulatta
ENSHCOG00000009446	gnl3	100	41.651	ENSMNEG00000041979	GNL3	100	41.591	Macaca_nemestrina
ENSHCOG00000009446	gnl3	99	43.649	ENSMLEG00000027696	GNL3	99	42.527	Mandrillus_leucophaeus
ENSHCOG00000009446	gnl3	99	64.738	ENSMAMG00000008904	gnl3	99	63.521	Mastacembelus_armatus
ENSHCOG00000009446	gnl3	86	61.618	ENSMZEG00005014957	-	95	60.861	Maylandia_zebra
ENSHCOG00000009446	gnl3	99	63.472	ENSMZEG00005014857	gnl3	99	63.472	Maylandia_zebra
ENSHCOG00000009446	gnl3	96	37.091	ENSMGAG00000000848	GNL3	100	35.762	Meleagris_gallopavo
ENSHCOG00000009446	gnl3	99	41.062	ENSMAUG00000020178	Gnl3	99	40.608	Mesocricetus_auratus
ENSHCOG00000009446	gnl3	99	40.708	ENSMICG00000016373	GNL3	99	40.000	Microcebus_murinus
ENSHCOG00000009446	gnl3	99	41.003	ENSMOCG00000018437	Gnl3	99	40.314	Microtus_ochrogaster
ENSHCOG00000009446	gnl3	99	60.144	ENSMMOG00000002815	gnl3	99	60.144	Mola_mola
ENSHCOG00000009446	gnl3	86	46.473	ENSMODG00000011257	GNL3	99	43.440	Monodelphis_domestica
ENSHCOG00000009446	gnl3	99	60.595	ENSMALG00000021043	gnl3	93	68.172	Monopterus_albus
ENSHCOG00000009446	gnl3	99	41.003	MGP_CAROLIEiJ_G0019063	Gnl3	99	41.889	Mus_caroli
ENSHCOG00000009446	gnl3	99	40.311	ENSMUSG00000042354	Gnl3	100	56.000	Mus_musculus
ENSHCOG00000009446	gnl3	99	42.068	MGP_PahariEiJ_G0030080	Gnl3	99	41.533	Mus_pahari
ENSHCOG00000009446	gnl3	99	40.657	MGP_SPRETEiJ_G0019948	Gnl3	99	41.429	Mus_spretus
ENSHCOG00000009446	gnl3	99	41.039	ENSMPUG00000016777	GNL3	99	39.894	Mustela_putorius_furo
ENSHCOG00000009446	gnl3	99	40.675	ENSMLUG00000000728	GNL3	86	44.583	Myotis_lucifugus
ENSHCOG00000009446	gnl3	99	40.845	ENSNGAG00000017202	Gnl3	99	40.422	Nannospalax_galili
ENSHCOG00000009446	gnl3	86	61.491	ENSNBRG00000013161	gnl3	98	60.736	Neolamprologus_brichardi
ENSHCOG00000009446	gnl3	99	43.262	ENSNLEG00000007173	GNL3	99	42.349	Nomascus_leucogenys
ENSHCOG00000009446	gnl3	76	38.119	ENSMEUG00000011502	-	92	36.652	Notamacropus_eugenii
ENSHCOG00000009446	gnl3	81	35.862	ENSOPRG00000009356	GNL3	96	36.219	Ochotona_princeps
ENSHCOG00000009446	gnl3	99	41.622	ENSODEG00000009492	GNL3	99	40.827	Octodon_degus
ENSHCOG00000009446	gnl3	99	64.079	ENSONIG00000019335	gnl3	99	63.718	Oreochromis_niloticus
ENSHCOG00000009446	gnl3	99	43.617	ENSOANG00000013437	GNL3	99	44.029	Ornithorhynchus_anatinus
ENSHCOG00000009446	gnl3	99	41.503	ENSOCUG00000009841	GNL3	99	40.391	Oryctolagus_cuniculus
ENSHCOG00000009446	gnl3	99	61.191	ENSORLG00000016030	gnl3	99	59.420	Oryzias_latipes
ENSHCOG00000009446	gnl3	99	61.191	ENSORLG00020014358	gnl3	99	60.254	Oryzias_latipes_hni
ENSHCOG00000009446	gnl3	99	61.372	ENSORLG00015009489	gnl3	99	60.000	Oryzias_latipes_hsok
ENSHCOG00000009446	gnl3	99	62.069	ENSOMEG00000005462	gnl3	99	59.857	Oryzias_melastigma
ENSHCOG00000009446	gnl3	99	41.799	ENSOGAG00000004101	GNL3	99	40.845	Otolemur_garnettii
ENSHCOG00000009446	gnl3	99	41.696	ENSOARG00000002470	GNL3	99	41.741	Ovis_aries
ENSHCOG00000009446	gnl3	99	43.794	ENSPPAG00000019253	GNL3	99	42.883	Pan_paniscus
ENSHCOG00000009446	gnl3	99	42.096	ENSPPRG00000009550	GNL3	99	40.426	Panthera_pardus
ENSHCOG00000009446	gnl3	99	41.918	ENSPTIG00000009356	GNL3	99	40.248	Panthera_tigris_altaica
ENSHCOG00000009446	gnl3	99	43.794	ENSPTRG00000015009	GNL3	99	42.883	Pan_troglodytes
ENSHCOG00000009446	gnl3	99	42.021	ENSPANG00000016579	GNL3	99	41.093	Papio_anubis
ENSHCOG00000009446	gnl3	99	54.317	ENSPKIG00000024295	gnl3	99	52.072	Paramormyrops_kingsleyae
ENSHCOG00000009446	gnl3	100	44.404	ENSPSIG00000011486	GNL3	100	44.561	Pelodiscus_sinensis
ENSHCOG00000009446	gnl3	99	57.762	ENSPMGG00000008210	gnl3	99	56.584	Periophthalmus_magnuspinnatus
ENSHCOG00000009446	gnl3	99	40.845	ENSPEMG00000017577	Gnl3	88	44.676	Peromyscus_maniculatus_bairdii
ENSHCOG00000009446	gnl3	86	45.021	ENSPCIG00000018642	GNL3	84	44.737	Phascolarctos_cinereus
ENSHCOG00000009446	gnl3	99	59.464	ENSPFOG00000017601	gnl3	99	59.459	Poecilia_formosa
ENSHCOG00000009446	gnl3	99	62.568	ENSPLAG00000016968	gnl3	99	62.568	Poecilia_latipinna
ENSHCOG00000009446	gnl3	99	60.688	ENSPMEG00000018775	gnl3	99	59.715	Poecilia_mexicana
ENSHCOG00000009446	gnl3	99	59.455	ENSPREG00000002909	gnl3	99	56.036	Poecilia_reticulata
ENSHCOG00000009446	gnl3	99	43.214	ENSPPYG00000013800	GNL3	99	42.652	Pongo_abelii
ENSHCOG00000009446	gnl3	80	44.248	ENSPCAG00000002006	GNL3	80	42.889	Procavia_capensis
ENSHCOG00000009446	gnl3	99	42.077	ENSPCOG00000026637	GNL3	99	41.197	Propithecus_coquereli
ENSHCOG00000009446	gnl3	99	42.004	ENSPVAG00000012586	GNL3	99	41.270	Pteropus_vampyrus
ENSHCOG00000009446	gnl3	89	57.283	ENSPNYG00000005130	gnl3	95	57.114	Pundamilia_nyererei
ENSHCOG00000009446	gnl3	99	48.763	ENSPNAG00000013096	gnl3	99	48.944	Pygocentrus_nattereri
ENSHCOG00000009446	gnl3	99	41.579	ENSRNOG00000028461	Gnl3	99	41.081	Rattus_norvegicus
ENSHCOG00000009446	gnl3	99	42.730	ENSRBIG00000031778	GNL3	99	41.975	Rhinopithecus_bieti
ENSHCOG00000009446	gnl3	99	42.730	ENSRROG00000030086	GNL3	99	41.975	Rhinopithecus_roxellana
ENSHCOG00000009446	gnl3	99	43.717	ENSSBOG00000019990	GNL3	99	43.060	Saimiri_boliviensis_boliviensis
ENSHCOG00000009446	gnl3	85	46.347	ENSSHAG00000006141	GNL3	86	45.714	Sarcophilus_harrisii
ENSHCOG00000009446	gnl3	99	55.957	ENSSFOG00015021228	gnl3	99	53.832	Scleropages_formosus
ENSHCOG00000009446	gnl3	99	63.214	ENSSMAG00000006662	gnl3	99	62.929	Scophthalmus_maximus
ENSHCOG00000009446	gnl3	99	65.461	ENSSDUG00000000972	gnl3	99	64.738	Seriola_dumerili
ENSHCOG00000009446	gnl3	99	65.642	ENSSLDG00000008692	gnl3	92	64.919	Seriola_lalandi_dorsalis
ENSHCOG00000009446	gnl3	85	42.827	ENSSARG00000002226	GNL3	87	42.827	Sorex_araneus
ENSHCOG00000009446	gnl3	99	45.280	ENSSPUG00000003582	GNL3	99	43.966	Sphenodon_punctatus
ENSHCOG00000009446	gnl3	99	64.758	ENSSPAG00000020180	gnl3	99	64.440	Stegastes_partitus
ENSHCOG00000009446	gnl3	99	40.250	ENSSSCG00000011449	GNL3	99	40.177	Sus_scrofa
ENSHCOG00000009446	gnl3	84	49.791	ENSTGUG00000005774	GNL3	100	44.815	Taeniopygia_guttata
ENSHCOG00000009446	gnl3	99	58.951	ENSTRUG00000005552	gnl3	99	58.951	Takifugu_rubripes
ENSHCOG00000009446	gnl3	99	58.770	ENSTNIG00000007263	gnl3	99	58.409	Tetraodon_nigroviridis
ENSHCOG00000009446	gnl3	100	40.331	ENSTBEG00000017518	GNL3	100	40.619	Tupaia_belangeri
ENSHCOG00000009446	gnl3	99	42.179	ENSUAMG00000012347	GNL3	99	40.949	Ursus_americanus
ENSHCOG00000009446	gnl3	99	42.355	ENSUMAG00000021001	GNL3	99	41.125	Ursus_maritimus
ENSHCOG00000009446	gnl3	99	40.966	ENSVVUG00000024536	-	99	40.141	Vulpes_vulpes
ENSHCOG00000009446	gnl3	85	59.958	ENSXCOG00000018425	gnl3	95	64.667	Xiphophorus_couchianus
ENSHCOG00000009446	gnl3	99	60.971	ENSXMAG00000022565	gnl3	99	59.930	Xiphophorus_maculatus