EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000009447 (Gene tree)
Gene ID: 109511066
Gene Symbol: trmt1
Alias: im:7150454
Full Name: tRNA methyltransferase 1
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 7323 bases
Position: chrKV880534.1:1095376-1102698
Accession: 109511066
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000022060	zf-CCCH	PF00642.24	1.9e-06	1	1
ENSHCOP00000022060	TRM	PF02005.16	1.1e-126	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000002043	-	1896	XM_019861808	ENSHCOP00000022060	631 (aa)	XP_019717367	-

Gene Model

Click here to download ENSHCOG00000009447's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000009447's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000009447	trmt1	88	63.763	ENSG00000104907	TRMT1	99	67.016	Homo_sapiens
ENSHCOG00000009447	trmt1	88	63.222	ENSAMEG00000012598	TRMT1	85	63.222	Ailuropoda_melanoleuca
ENSHCOG00000009447	trmt1	91	76.870	ENSACIG00000018680	trmt1	91	76.870	Amphilophus_citrinellus
ENSHCOG00000009447	trmt1	100	75.789	ENSAOCG00000006781	trmt1	100	75.789	Amphiprion_ocellaris
ENSHCOG00000009447	trmt1	100	75.639	ENSAPEG00000007712	trmt1	100	75.639	Amphiprion_percula
ENSHCOG00000009447	trmt1	100	74.478	ENSATEG00000001872	trmt1	100	74.478	Anabas_testudineus
ENSHCOG00000009447	trmt1	88	65.331	ENSACAG00000003825	TRMT1	93	65.331	Anolis_carolinensis
ENSHCOG00000009447	trmt1	88	62.827	ENSANAG00000023016	TRMT1	92	62.827	Aotus_nancymaae
ENSHCOG00000009447	trmt1	95	76.733	ENSACLG00000010073	trmt1	99	76.733	Astatotilapia_calliptera
ENSHCOG00000009447	trmt1	93	73.167	ENSAMXG00000012026	trmt1	90	73.167	Astyanax_mexicanus
ENSHCOG00000009447	trmt1	88	63.415	ENSBTAG00000019325	TRMT1	82	63.415	Bos_taurus
ENSHCOG00000009447	trmt1	79	39.655	WBGene00006613	trm-1	93	39.655	Caenorhabditis_elegans
ENSHCOG00000009447	trmt1	88	61.565	ENSCJAG00000004566	TRMT1	88	61.565	Callithrix_jacchus
ENSHCOG00000009447	trmt1	88	64.098	ENSCAFG00000017070	TRMT1	90	64.098	Canis_familiaris
ENSHCOG00000009447	trmt1	88	63.972	ENSCAFG00020005397	TRMT1	88	63.972	Canis_lupus_dingo
ENSHCOG00000009447	trmt1	88	63.826	ENSCHIG00000013569	TRMT1	87	63.826	Capra_hircus
ENSHCOG00000009447	trmt1	95	57.929	ENSTSYG00000003207	TRMT1	93	58.091	Carlito_syrichta
ENSHCOG00000009447	trmt1	82	59.735	ENSCAPG00000003355	TRMT1	94	59.735	Cavia_aperea
ENSHCOG00000009447	trmt1	88	62.872	ENSCPOG00000011754	TRMT1	87	62.872	Cavia_porcellus
ENSHCOG00000009447	trmt1	88	61.257	ENSCCAG00000022263	TRMT1	92	61.257	Cebus_capucinus
ENSHCOG00000009447	trmt1	88	63.700	ENSCATG00000039850	TRMT1	87	63.700	Cercocebus_atys
ENSHCOG00000009447	trmt1	72	52.128	ENSCATG00000038220	-	85	52.128	Cercocebus_atys
ENSHCOG00000009447	trmt1	88	63.860	ENSCLAG00000015295	TRMT1	89	61.296	Chinchilla_lanigera
ENSHCOG00000009447	trmt1	73	65.612	ENSCSAG00000006500	TRMT1	89	65.612	Chlorocebus_sabaeus
ENSHCOG00000009447	trmt1	88	66.314	ENSCPBG00000023866	TRMT1	85	66.314	Chrysemys_picta_bellii
ENSHCOG00000009447	trmt1	85	46.448	ENSCING00000002884	-	98	46.448	Ciona_intestinalis
ENSHCOG00000009447	trmt1	84	47.970	ENSCSAVG00000010927	-	100	47.388	Ciona_savignyi
ENSHCOG00000009447	trmt1	88	51.675	ENSCANG00000040631	TRMT1	87	51.675	Colobus_angolensis_palliatus
ENSHCOG00000009447	trmt1	90	48.714	ENSCANG00000031650	-	91	48.714	Colobus_angolensis_palliatus
ENSHCOG00000009447	trmt1	91	61.616	ENSCGRG00001022594	Trmt1	91	61.616	Cricetulus_griseus_chok1gshd
ENSHCOG00000009447	trmt1	91	61.616	ENSCGRG00000017732	Trmt1	89	61.616	Cricetulus_griseus_crigri
ENSHCOG00000009447	trmt1	91	79.245	ENSCSEG00000001643	trmt1	86	80.962	Cynoglossus_semilaevis
ENSHCOG00000009447	trmt1	95	79.242	ENSCVAG00000011886	trmt1	92	79.242	Cyprinodon_variegatus
ENSHCOG00000009447	trmt1	90	73.129	ENSDARG00000010978	trmt1	88	73.129	Danio_rerio
ENSHCOG00000009447	trmt1	80	43.233	ENSDNOG00000048240	-	89	43.233	Dasypus_novemcinctus
ENSHCOG00000009447	trmt1	88	61.606	ENSDORG00000014298	Trmt1	87	61.606	Dipodomys_ordii
ENSHCOG00000009447	trmt1	84	45.719	FBgn0032430	CG6388	92	45.719	Drosophila_melanogaster
ENSHCOG00000009447	trmt1	82	48.496	ENSEBUG00000003449	trmt1	78	48.694	Eptatretus_burgeri
ENSHCOG00000009447	trmt1	88	63.923	ENSEASG00005004050	TRMT1	90	63.923	Equus_asinus_asinus
ENSHCOG00000009447	trmt1	88	63.923	ENSECAG00000016149	TRMT1	90	63.923	Equus_caballus
ENSHCOG00000009447	trmt1	61	53.418	ENSEEUG00000014102	-	100	53.418	Erinaceus_europaeus
ENSHCOG00000009447	trmt1	94	70.636	ENSELUG00000021659	trmt1	92	70.636	Esox_lucius
ENSHCOG00000009447	trmt1	88	63.176	ENSFCAG00000000483	TRMT1	87	63.176	Felis_catus
ENSHCOG00000009447	trmt1	88	63.748	ENSFDAG00000007386	TRMT1	87	63.748	Fukomys_damarensis
ENSHCOG00000009447	trmt1	85	78.119	ENSFHEG00000012865	trmt1	92	78.119	Fundulus_heteroclitus
ENSHCOG00000009447	trmt1	89	69.177	ENSGMOG00000006564	trmt1	99	69.177	Gadus_morhua
ENSHCOG00000009447	trmt1	95	77.832	ENSGAFG00000011862	trmt1	97	77.832	Gambusia_affinis
ENSHCOG00000009447	trmt1	89	77.058	ENSGACG00000000227	trmt1	93	77.583	Gasterosteus_aculeatus
ENSHCOG00000009447	trmt1	87	65.836	ENSGAGG00000016432	TRMT1	84	65.836	Gopherus_agassizii
ENSHCOG00000009447	trmt1	88	63.763	ENSGGOG00000014007	TRMT1	87	63.700	Gorilla_gorilla
ENSHCOG00000009447	trmt1	86	74.630	ENSHBUG00000008821	trmt1	92	74.630	Haplochromis_burtoni
ENSHCOG00000009447	trmt1	88	63.573	ENSHGLG00000015972	TRMT1	87	63.573	Heterocephalus_glaber_female
ENSHCOG00000009447	trmt1	88	59.266	ENSHGLG00100018112	TRMT1	87	59.266	Heterocephalus_glaber_male
ENSHCOG00000009447	trmt1	94	69.440	ENSIPUG00000002899	trmt1	91	69.936	Ictalurus_punctatus
ENSHCOG00000009447	trmt1	93	60.891	ENSSTOG00000012531	TRMT1	92	60.891	Ictidomys_tridecemlineatus
ENSHCOG00000009447	trmt1	88	62.827	ENSJJAG00000017154	Trmt1	88	63.066	Jaculus_jaculus
ENSHCOG00000009447	trmt1	91	80.308	ENSKMAG00000011809	trmt1	98	78.596	Kryptolebias_marmoratus
ENSHCOG00000009447	trmt1	95	77.303	ENSLBEG00000012703	trmt1	90	77.303	Labrus_bergylta
ENSHCOG00000009447	trmt1	88	60.664	ENSLACG00000014585	TRMT1	93	60.664	Latimeria_chalumnae
ENSHCOG00000009447	trmt1	88	67.372	ENSLOCG00000006479	trmt1	98	67.372	Lepisosteus_oculatus
ENSHCOG00000009447	trmt1	88	63.351	ENSLAFG00000014072	TRMT1	88	63.351	Loxodonta_africana
ENSHCOG00000009447	trmt1	88	63.700	ENSMFAG00000033143	TRMT1	87	63.700	Macaca_fascicularis
ENSHCOG00000009447	trmt1	88	59.612	ENSMMUG00000001167	TRMT1	87	59.612	Macaca_mulatta
ENSHCOG00000009447	trmt1	88	63.700	ENSMNEG00000037867	TRMT1	87	63.700	Macaca_nemestrina
ENSHCOG00000009447	trmt1	88	63.525	ENSMLEG00000016142	TRMT1	87	63.525	Mandrillus_leucophaeus
ENSHCOG00000009447	trmt1	92	82.653	ENSMAMG00000004357	trmt1	89	82.653	Mastacembelus_armatus
ENSHCOG00000009447	trmt1	100	73.293	ENSMZEG00005014510	trmt1	100	73.293	Maylandia_zebra
ENSHCOG00000009447	trmt1	88	62.261	ENSMAUG00000011134	Trmt1	87	62.261	Mesocricetus_auratus
ENSHCOG00000009447	trmt1	88	64.049	ENSMICG00000000793	TRMT1	87	64.049	Microcebus_murinus
ENSHCOG00000009447	trmt1	88	63.112	ENSMOCG00000015895	Trmt1	87	63.112	Microtus_ochrogaster
ENSHCOG00000009447	trmt1	95	76.835	ENSMMOG00000011097	trmt1	100	76.835	Mola_mola
ENSHCOG00000009447	trmt1	88	63.748	ENSMODG00000011619	TRMT1	93	63.748	Monodelphis_domestica
ENSHCOG00000009447	trmt1	95	62.058	MGP_CAROLIEiJ_G0031304	Trmt1	93	61.958	Mus_caroli
ENSHCOG00000009447	trmt1	95	62.058	ENSMUSG00000001909	Trmt1	93	62.058	Mus_musculus
ENSHCOG00000009447	trmt1	95	61.897	MGP_SPRETEiJ_G0032422	Trmt1	93	61.897	Mus_spretus
ENSHCOG00000009447	trmt1	88	63.923	ENSMPUG00000004210	TRMT1	82	63.923	Mustela_putorius_furo
ENSHCOG00000009447	trmt1	98	60.809	ENSMLUG00000012809	TRMT1	94	60.809	Myotis_lucifugus
ENSHCOG00000009447	trmt1	88	63.700	ENSNGAG00000022486	Trmt1	86	63.700	Nannospalax_galili
ENSHCOG00000009447	trmt1	79	86.765	ENSNBRG00000024376	trmt1	87	86.765	Neolamprologus_brichardi
ENSHCOG00000009447	trmt1	72	62.112	ENSNLEG00000013019	-	84	62.112	Nomascus_leucogenys
ENSHCOG00000009447	trmt1	88	64.273	ENSMEUG00000013756	TRMT1	97	64.273	Notamacropus_eugenii
ENSHCOG00000009447	trmt1	71	72.000	ENSOPRG00000009471	-	71	72.000	Ochotona_princeps
ENSHCOG00000009447	trmt1	88	63.684	ENSODEG00000010323	TRMT1	87	63.684	Octodon_degus
ENSHCOG00000009447	trmt1	100	76.480	ENSONIG00000000400	trmt1	100	76.480	Oreochromis_niloticus
ENSHCOG00000009447	trmt1	80	62.692	ENSOCUG00000021934	TRMT1	97	62.692	Oryctolagus_cuniculus
ENSHCOG00000009447	trmt1	100	69.486	ENSORLG00000020074	trmt1	97	73.463	Oryzias_latipes
ENSHCOG00000009447	trmt1	94	77.138	ENSORLG00020007561	trmt1	96	75.896	Oryzias_latipes_hni
ENSHCOG00000009447	trmt1	100	73.282	ENSORLG00015006547	trmt1	100	73.282	Oryzias_latipes_hsok
ENSHCOG00000009447	trmt1	94	78.089	ENSOMEG00000019343	trmt1	93	78.089	Oryzias_melastigma
ENSHCOG00000009447	trmt1	88	63.304	ENSOGAG00000025576	TRMT1	90	63.652	Otolemur_garnettii
ENSHCOG00000009447	trmt1	88	51.652	ENSOARG00000009397	TRMT1	80	51.826	Ovis_aries
ENSHCOG00000009447	trmt1	88	56.643	ENSPPRG00000012117	TRMT1	87	56.469	Panthera_pardus
ENSHCOG00000009447	trmt1	65	61.888	ENSPTIG00000008833	TRMT1	82	61.888	Panthera_tigris_altaica
ENSHCOG00000009447	trmt1	88	63.763	ENSPTRG00000010557	TRMT1	87	63.763	Pan_troglodytes
ENSHCOG00000009447	trmt1	86	47.090	ENSPTRG00000050421	-	90	47.090	Pan_troglodytes
ENSHCOG00000009447	trmt1	88	63.700	ENSPANG00000009247	TRMT1	87	63.700	Papio_anubis
ENSHCOG00000009447	trmt1	68	53.288	ENSPANG00000034058	-	78	53.288	Papio_anubis
ENSHCOG00000009447	trmt1	92	72.203	ENSPKIG00000005309	trmt1	88	72.203	Paramormyrops_kingsleyae
ENSHCOG00000009447	trmt1	84	56.364	ENSPSIG00000008762	TRMT1	79	56.364	Pelodiscus_sinensis
ENSHCOG00000009447	trmt1	90	77.951	ENSPMGG00000019764	trmt1	92	77.951	Periophthalmus_magnuspinnatus
ENSHCOG00000009447	trmt1	95	60.806	ENSPEMG00000016247	Trmt1	92	60.806	Peromyscus_maniculatus_bairdii
ENSHCOG00000009447	trmt1	89	61.391	ENSPMAG00000004329	trmt1	90	61.391	Petromyzon_marinus
ENSHCOG00000009447	trmt1	90	63.793	ENSPCIG00000019273	TRMT1	90	63.793	Phascolarctos_cinereus
ENSHCOG00000009447	trmt1	94	78.843	ENSPFOG00000008527	trmt1	94	78.843	Poecilia_formosa
ENSHCOG00000009447	trmt1	94	77.686	ENSPLAG00000018788	trmt1	94	79.818	Poecilia_latipinna
ENSHCOG00000009447	trmt1	94	78.678	ENSPMEG00000013120	trmt1	94	78.678	Poecilia_mexicana
ENSHCOG00000009447	trmt1	98	74.528	ENSPREG00000000211	trmt1	95	74.528	Poecilia_reticulata
ENSHCOG00000009447	trmt1	88	63.415	ENSPPYG00000009622	TRMT1	87	63.351	Pongo_abelii
ENSHCOG00000009447	trmt1	88	58.813	ENSPCAG00000003698	TRMT1	88	58.813	Procavia_capensis
ENSHCOG00000009447	trmt1	88	63.525	ENSPCOG00000008653	TRMT1	87	63.525	Propithecus_coquereli
ENSHCOG00000009447	trmt1	88	63.700	ENSPVAG00000015076	TRMT1	87	63.700	Pteropus_vampyrus
ENSHCOG00000009447	trmt1	95	78.224	ENSPNYG00000013960	trmt1	99	78.224	Pundamilia_nyererei
ENSHCOG00000009447	trmt1	92	66.162	ENSPNAG00000024859	trmt1	93	66.162	Pygocentrus_nattereri
ENSHCOG00000009447	trmt1	90	63.203	ENSRNOG00000002914	Trmt1	91	63.203	Rattus_norvegicus
ENSHCOG00000009447	trmt1	90	47.396	ENSRBIG00000037505	-	92	48.264	Rhinopithecus_bieti
ENSHCOG00000009447	trmt1	88	63.874	ENSRBIG00000038324	TRMT1	87	63.874	Rhinopithecus_bieti
ENSHCOG00000009447	trmt1	88	63.874	ENSRROG00000028599	TRMT1	87	63.874	Rhinopithecus_roxellana
ENSHCOG00000009447	trmt1	90	47.396	ENSRROG00000031847	-	91	48.264	Rhinopithecus_roxellana
ENSHCOG00000009447	trmt1	79	37.017	YDR120C	-	92	37.017	Saccharomyces_cerevisiae
ENSHCOG00000009447	trmt1	88	61.780	ENSSBOG00000028861	TRMT1	92	61.780	Saimiri_boliviensis_boliviensis
ENSHCOG00000009447	trmt1	88	65.149	ENSSHAG00000014381	TRMT1	93	65.324	Sarcophilus_harrisii
ENSHCOG00000009447	trmt1	89	74.296	ENSSFOG00015004139	trmt1	84	74.296	Scleropages_formosus
ENSHCOG00000009447	trmt1	95	76.038	ENSSMAG00000021136	trmt1	100	72.836	Scophthalmus_maximus
ENSHCOG00000009447	trmt1	100	74.030	ENSSDUG00000012740	trmt1	100	74.627	Seriola_dumerili
ENSHCOG00000009447	trmt1	91	81.849	ENSSLDG00000005971	trmt1	100	74.328	Seriola_lalandi_dorsalis
ENSHCOG00000009447	trmt1	85	60.909	ENSSARG00000005138	TRMT1	96	60.909	Sorex_araneus
ENSHCOG00000009447	trmt1	88	51.943	ENSSPUG00000001084	TRMT1	89	52.297	Sphenodon_punctatus
ENSHCOG00000009447	trmt1	91	79.966	ENSSPAG00000007153	trmt1	97	79.966	Stegastes_partitus
ENSHCOG00000009447	trmt1	88	63.573	ENSSSCG00000013744	TRMT1	90	63.573	Sus_scrofa
ENSHCOG00000009447	trmt1	97	68.487	ENSTRUG00000010700	trmt1	97	68.487	Takifugu_rubripes
ENSHCOG00000009447	trmt1	88	79.754	ENSTNIG00000018808	trmt1	98	79.754	Tetraodon_nigroviridis
ENSHCOG00000009447	trmt1	88	60.558	ENSTTRG00000006379	TRMT1	87	60.558	Tursiops_truncatus
ENSHCOG00000009447	trmt1	88	63.573	ENSUAMG00000022911	TRMT1	93	61.207	Ursus_americanus
ENSHCOG00000009447	trmt1	88	63.398	ENSUMAG00000006027	TRMT1	90	63.398	Ursus_maritimus
ENSHCOG00000009447	trmt1	88	64.049	ENSVVUG00000024177	TRMT1	87	64.049	Vulpes_vulpes
ENSHCOG00000009447	trmt1	71	67.391	ENSXETG00000033863	TRMT1	92	67.391	Xenopus_tropicalis
ENSHCOG00000009447	trmt1	94	78.843	ENSXCOG00000015733	trmt1	94	78.843	Xiphophorus_couchianus
ENSHCOG00000009447	trmt1	89	80.803	ENSXMAG00000013823	trmt1	99	80.803	Xiphophorus_maculatus