EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSHCOG00000009510 (Gene tree)
Gene ID
109508408
Gene Symbol
smarca4a
Alias
brahma-related gene 1|brg1|smarca2|smarca4|wu:fb51a08|yng|young
Full Name
SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 4
Gene Type
protein_coding
Species
Hippocampus_comes
Status
putative
Strand
Minus strand
Length
12620 bases
Position
chrKV880522.1:2674669-2687288
Accession
109508408
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSHCOP00000022071ResIIIPF04851.155.9e-1011
ENSHCOP00000022071BRKPF07533.166.1e-1711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSHCOT00000002005-4821XM_019858359ENSHCOP000000220711606 (aa)XP_019713918-
Gene Model
Click here to download ENSHCOG00000009510's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000009510's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSHCOG00000009510smarca4a7978.384ENSHCOG00000015348-8877.994
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSHCOG00000009510smarca4a9686.876ENSG00000127616SMARCA49995.652Homo_sapiens
ENSHCOG00000009510smarca4a9684.562ENSAPOG00000004542SMARCA49984.347Acanthochromis_polyacanthus
ENSHCOG00000009510smarca4a7393.182ENSAPOG00000003509smarca4a9391.115Acanthochromis_polyacanthus
ENSHCOG00000009510smarca4a9682.718ENSAMEG00000010868SMARCA49682.512Ailuropoda_melanoleuca
ENSHCOG00000009510smarca4a9695.090ENSACIG00000021550smarca4a9495.026Amphilophus_citrinellus
ENSHCOG00000009510smarca4a9684.204ENSACIG00000003035-9984.567Amphilophus_citrinellus
ENSHCOG00000009510smarca4a9191.981ENSAOCG00000019167smarca4a10092.049Amphiprion_ocellaris
ENSHCOG00000009510smarca4a9586.039ENSAOCG00000009450-9786.446Amphiprion_ocellaris
ENSHCOG00000009510smarca4a9682.440ENSAPEG00000023108-9483.183Amphiprion_percula
ENSHCOG00000009510smarca4a9192.118ENSAPEG00000015559smarca4a10092.186Amphiprion_percula
ENSHCOG00000009510smarca4a9685.714ENSATEG00000001094-9485.406Anabas_testudineus
ENSHCOG00000009510smarca4a9694.699ENSATEG00000011524smarca4a9594.764Anabas_testudineus
ENSHCOG00000009510smarca4a9686.701ENSANAG00000036991SMARCA49583.418Aotus_nancymaae
ENSHCOG00000009510smarca4a9684.987ENSACLG00000008638-9983.787Astatotilapia_calliptera
ENSHCOG00000009510smarca4a9694.778ENSACLG00000000163smarca4a9894.006Astatotilapia_calliptera
ENSHCOG00000009510smarca4a9587.370ENSAMXG00000011238-9487.339Astyanax_mexicanus
ENSHCOG00000009510smarca4a9685.917ENSAMXG00000021023smarca4a9685.724Astyanax_mexicanus
ENSHCOG00000009510smarca4a9687.709ENSBTAG00000019220SMARCA49286.684Bos_taurus
ENSHCOG00000009510smarca4a9682.729ENSCJAG00000005936SMARCA49582.585Callithrix_jacchus
ENSHCOG00000009510smarca4a9686.812ENSCAFG00000017584SMARCA49586.538Canis_familiaris
ENSHCOG00000009510smarca4a9686.812ENSCAFG00020024620SMARCA49884.625Canis_lupus_dingo
ENSHCOG00000009510smarca4a9683.740ENSCHIG00000015318SMARCA49282.752Capra_hircus
ENSHCOG00000009510smarca4a9687.516ENSTSYG00000012966SMARCA49586.864Carlito_syrichta
ENSHCOG00000009510smarca4a9580.576ENSCAPG00000015932SMARCA49289.464Cavia_aperea
ENSHCOG00000009510smarca4a9686.603ENSCPOG00000015549SMARCA49586.410Cavia_porcellus
ENSHCOG00000009510smarca4a9684.561ENSCCAG00000031660SMARCA49384.285Cebus_capucinus
ENSHCOG00000009510smarca4a9686.876ENSCATG00000029530SMARCA49586.603Cercocebus_atys
ENSHCOG00000009510smarca4a9687.436ENSCLAG00000011946SMARCA49587.307Chinchilla_lanigera
ENSHCOG00000009510smarca4a9687.300ENSCPBG00000009994SMARCA49586.851Chrysemys_picta_bellii
ENSHCOG00000009510smarca4a9686.876ENSCANG00000036013SMARCA49586.603Colobus_angolensis_palliatus
ENSHCOG00000009510smarca4a9686.611ENSCGRG00001016732Smarca49586.282Cricetulus_griseus_chok1gshd
ENSHCOG00000009510smarca4a9686.611ENSCGRG00000017242Smarca49586.282Cricetulus_griseus_crigri
ENSHCOG00000009510smarca4a9393.968ENSCSEG00000014771smarca4a9393.981Cynoglossus_semilaevis
ENSHCOG00000009510smarca4a9692.452ENSCVAG00000006979smarca4a9592.452Cyprinodon_variegatus
ENSHCOG00000009510smarca4a9586.281ENSCVAG00000003018-9686.485Cyprinodon_variegatus
ENSHCOG00000009510smarca4a9385.057ENSDARG00000104339SMARCA49484.930Danio_rerio
ENSHCOG00000009510smarca4a9690.302ENSDARG00000077226smarca4a9590.302Danio_rerio
ENSHCOG00000009510smarca4a9678.739ENSDNOG00000048847SMARCA49090.683Dasypus_novemcinctus
ENSHCOG00000009510smarca4a8581.200ENSDORG00000002544Smarca49578.177Dipodomys_ordii
ENSHCOG00000009510smarca4a9576.099ENSETEG00000013361SMARCA49475.223Echinops_telfairi
ENSHCOG00000009510smarca4a9686.611ENSEASG00005006167SMARCA49584.884Equus_asinus_asinus
ENSHCOG00000009510smarca4a9686.675ENSECAG00000008334SMARCA49586.474Equus_caballus
ENSHCOG00000009510smarca4a9690.758ENSELUG00000010247smarca4a9389.092Esox_lucius
ENSHCOG00000009510smarca4a9580.856ENSELUG00000023232-9479.426Esox_lucius
ENSHCOG00000009510smarca4a9686.573ENSFCAG00000004894SMARCA49586.244Felis_catus
ENSHCOG00000009510smarca4a9383.646ENSFALG00000004208SMARCA49284.564Ficedula_albicollis
ENSHCOG00000009510smarca4a9386.255ENSFDAG00000012237SMARCA49786.122Fukomys_damarensis
ENSHCOG00000009510smarca4a9689.437ENSFHEG00000010182smarca4a9591.762Fundulus_heteroclitus
ENSHCOG00000009510smarca4a9685.320ENSFHEG00000007902-9484.650Fundulus_heteroclitus
ENSHCOG00000009510smarca4a9082.986ENSGMOG00000005756-8782.455Gadus_morhua
ENSHCOG00000009510smarca4a8591.057ENSGMOG00000002649smarca4a8892.126Gadus_morhua
ENSHCOG00000009510smarca4a7485.998ENSGALG00000047145SMARCA410084.884Gallus_gallus
ENSHCOG00000009510smarca4a9681.427ENSGAFG00000008827-9481.713Gambusia_affinis
ENSHCOG00000009510smarca4a8792.182ENSGAFG00000014900smarca4a9492.664Gambusia_affinis
ENSHCOG00000009510smarca4a9781.366ENSGACG00000016033-9681.359Gasterosteus_aculeatus
ENSHCOG00000009510smarca4a9493.338ENSGACG00000006691smarca4a9393.008Gasterosteus_aculeatus
ENSHCOG00000009510smarca4a9687.532ENSGAGG00000016757SMARCA49587.082Gopherus_agassizii
ENSHCOG00000009510smarca4a9686.876ENSGGOG00000009882SMARCA49586.603Gorilla_gorilla
ENSHCOG00000009510smarca4a9685.515ENSHBUG00000005447-9984.231Haplochromis_burtoni
ENSHCOG00000009510smarca4a9694.968ENSHBUG00000021172smarca4a9794.494Haplochromis_burtoni
ENSHCOG00000009510smarca4a9686.271ENSHGLG00000010519SMARCA49586.407Heterocephalus_glaber_female
ENSHCOG00000009510smarca4a9686.035ENSHGLG00100013774SMARCA49585.595Heterocephalus_glaber_male
ENSHCOG00000009510smarca4a9486.043ENSIPUG00000016346-9285.896Ictalurus_punctatus
ENSHCOG00000009510smarca4a9690.173ENSIPUG00000006107smarca4a9590.019Ictalurus_punctatus
ENSHCOG00000009510smarca4a9686.611ENSSTOG00000007939SMARCA49586.410Ictidomys_tridecemlineatus
ENSHCOG00000009510smarca4a9684.693ENSJJAG00000012877Smarca49584.118Jaculus_jaculus
ENSHCOG00000009510smarca4a9983.988ENSKMAG00000019518-10085.571Kryptolebias_marmoratus
ENSHCOG00000009510smarca4a9692.839ENSKMAG00000011931smarca4a9592.700Kryptolebias_marmoratus
ENSHCOG00000009510smarca4a9890.696ENSLBEG00000017383smarca4a9990.095Labrus_bergylta
ENSHCOG00000009510smarca4a9674.515ENSLBEG00000020655-9574.103Labrus_bergylta
ENSHCOG00000009510smarca4a5381.221ENSLACG00000015309SMARCA410080.986Latimeria_chalumnae
ENSHCOG00000009510smarca4a9686.091ENSLOCG00000007820smarca4a9585.052Lepisosteus_oculatus
ENSHCOG00000009510smarca4a9686.829ENSLAFG00000001433SMARCA49586.500Loxodonta_africana
ENSHCOG00000009510smarca4a9686.876ENSMFAG00000032146SMARCA49486.603Macaca_fascicularis
ENSHCOG00000009510smarca4a9686.876ENSMMUG00000012042SMARCA49092.239Macaca_mulatta
ENSHCOG00000009510smarca4a9686.923ENSMNEG00000028512SMARCA49587.099Macaca_nemestrina
ENSHCOG00000009510smarca4a9686.940ENSMLEG00000034976SMARCA49586.500Mandrillus_leucophaeus
ENSHCOG00000009510smarca4a9695.677ENSMAMG00000009256smarca4a9595.607Mastacembelus_armatus
ENSHCOG00000009510smarca4a8489.547ENSMAMG00000002841-9886.367Mastacembelus_armatus
ENSHCOG00000009510smarca4a9694.842ENSMZEG00005003889smarca4a9794.307Maylandia_zebra
ENSHCOG00000009510smarca4a9685.579ENSMZEG00005023861-9984.367Maylandia_zebra
ENSHCOG00000009510smarca4a9686.381ENSMAUG00000020731Smarca49586.052Mesocricetus_auratus
ENSHCOG00000009510smarca4a9686.637ENSMICG00000009806SMARCA49586.308Microcebus_murinus
ENSHCOG00000009510smarca4a9686.317ENSMOCG00000022209Smarca49585.988Microtus_ochrogaster
ENSHCOG00000009510smarca4a9892.595ENSMMOG00000007571smarca4a10092.536Mola_mola
ENSHCOG00000009510smarca4a9682.076ENSMMOG00000008466-9481.625Mola_mola
ENSHCOG00000009510smarca4a9685.625ENSMODG00000006287SMARCA49584.403Monodelphis_domestica
ENSHCOG00000009510smarca4a9183.402ENSMALG00000021534-9683.393Monopterus_albus
ENSHCOG00000009510smarca4a9394.511ENSMALG00000003388smarca4a9594.774Monopterus_albus
ENSHCOG00000009510smarca4a9686.483MGP_CAROLIEiJ_G0031879Smarca410085.354Mus_caroli
ENSHCOG00000009510smarca4a9686.483ENSMUSG00000032187Smarca49985.354Mus_musculus
ENSHCOG00000009510smarca4a9687.275MGP_PahariEiJ_G0014745Smarca410086.245Mus_pahari
ENSHCOG00000009510smarca4a9686.483MGP_SPRETEiJ_G0033003Smarca410085.354Mus_spretus
ENSHCOG00000009510smarca4a9686.812ENSMPUG00000005711SMARCA49586.538Mustela_putorius_furo
ENSHCOG00000009510smarca4a9686.803ENSMLUG00000004491-9586.474Myotis_lucifugus
ENSHCOG00000009510smarca4a9686.906ENSNGAG00000021852Smarca49586.577Nannospalax_galili
ENSHCOG00000009510smarca4a9690.962ENSNBRG00000011457smarca4a9890.651Neolamprologus_brichardi
ENSHCOG00000009510smarca4a9183.904ENSNBRG00000018865-9984.110Neolamprologus_brichardi
ENSHCOG00000009510smarca4a9783.770ENSNLEG00000012389SMARCA49483.397Nomascus_leucogenys
ENSHCOG00000009510smarca4a8196.552ENSOPRG00000000885-7896.552Ochotona_princeps
ENSHCOG00000009510smarca4a9684.974ENSODEG00000017127SMARCA49584.133Octodon_degus
ENSHCOG00000009510smarca4a9685.705ENSONIG00000018040-9584.596Oreochromis_niloticus
ENSHCOG00000009510smarca4a9694.774ENSONIG00000008196smarca4a9794.304Oreochromis_niloticus
ENSHCOG00000009510smarca4a9881.537ENSOCUG00000001787SMARCA49581.830Oryctolagus_cuniculus
ENSHCOG00000009510smarca4a9384.600ENSORLG00000003955-9184.757Oryzias_latipes
ENSHCOG00000009510smarca4a9392.914ENSORLG00000015452smarca4a9592.719Oryzias_latipes
ENSHCOG00000009510smarca4a9384.610ENSORLG00020009728-9880.930Oryzias_latipes_hni
ENSHCOG00000009510smarca4a9692.600ENSORLG00020004611smarca4a9592.719Oryzias_latipes_hni
ENSHCOG00000009510smarca4a9684.270ENSORLG00015007739-9184.155Oryzias_latipes_hsok
ENSHCOG00000009510smarca4a9692.719ENSORLG00015016560smarca4a9889.894Oryzias_latipes_hsok
ENSHCOG00000009510smarca4a9693.092ENSOMEG00000007486smarca4a9593.088Oryzias_melastigma
ENSHCOG00000009510smarca4a9384.938ENSOMEG00000016626-9184.428Oryzias_melastigma
ENSHCOG00000009510smarca4a9184.918ENSOGAG00000016148SMARCA410084.657Otolemur_garnettii
ENSHCOG00000009510smarca4a9487.739ENSOARG00000017454SMARCA49386.627Ovis_aries
ENSHCOG00000009510smarca4a9686.876ENSPPAG00000043191SMARCA49586.603Pan_paniscus
ENSHCOG00000009510smarca4a9686.573ENSPPRG00000000064SMARCA49586.244Panthera_pardus
ENSHCOG00000009510smarca4a9678.647ENSPTIG00000017447SMARCA49581.054Panthera_tigris_altaica
ENSHCOG00000009510smarca4a9686.876ENSPTRG00000010488SMARCA49586.603Pan_troglodytes
ENSHCOG00000009510smarca4a9686.987ENSPANG00000011042SMARCA49486.714Papio_anubis
ENSHCOG00000009510smarca4a9690.424ENSPKIG00000007770SMARCA49390.237Paramormyrops_kingsleyae
ENSHCOG00000009510smarca4a9686.959ENSPKIG00000010087-9387.748Paramormyrops_kingsleyae
ENSHCOG00000009510smarca4a9681.642ENSPSIG00000005547SMARCA49581.767Pelodiscus_sinensis
ENSHCOG00000009510smarca4a9686.381ENSPEMG00000020389Smarca49586.052Peromyscus_maniculatus_bairdii
ENSHCOG00000009510smarca4a9687.444ENSPCIG00000017138SMARCA49586.778Phascolarctos_cinereus
ENSHCOG00000009510smarca4a9691.379ENSPFOG00000007892smarca4a9591.688Poecilia_formosa
ENSHCOG00000009510smarca4a9685.274ENSPFOG00000012930-9582.328Poecilia_formosa
ENSHCOG00000009510smarca4a9686.516ENSPLAG00000018616-9586.727Poecilia_latipinna
ENSHCOG00000009510smarca4a9691.379ENSPLAG00000014294smarca4a9591.688Poecilia_latipinna
ENSHCOG00000009510smarca4a9691.379ENSPMEG00000003725smarca4a9691.752Poecilia_mexicana
ENSHCOG00000009510smarca4a9685.515ENSPMEG00000008929-9884.505Poecilia_mexicana
ENSHCOG00000009510smarca4a9685.076ENSPREG00000014823-9881.708Poecilia_reticulata
ENSHCOG00000009510smarca4a9690.967ENSPREG00000014608smarca4a9889.732Poecilia_reticulata
ENSHCOG00000009510smarca4a9685.078ENSPPYG00000009568SMARCA49584.306Pongo_abelii
ENSHCOG00000009510smarca4a7793.407ENSPCAG00000014054SMARCA47393.258Procavia_capensis
ENSHCOG00000009510smarca4a9686.803ENSPCOG00000023011SMARCA49586.308Propithecus_coquereli
ENSHCOG00000009510smarca4a9280.576ENSPVAG00000007787SMARCA49079.317Pteropus_vampyrus
ENSHCOG00000009510smarca4a9695.097ENSPNYG00000000717smarca4a9894.381Pundamilia_nyererei
ENSHCOG00000009510smarca4a9683.946ENSPNYG00000023995-9984.294Pundamilia_nyererei
ENSHCOG00000009510smarca4a9687.130ENSPNAG00000006636-9686.662Pygocentrus_nattereri
ENSHCOG00000009510smarca4a9685.659ENSPNAG00000024136smarca4a9485.770Pygocentrus_nattereri
ENSHCOG00000009510smarca4a9686.547ENSRNOG00000009271Smarca49586.218Rattus_norvegicus
ENSHCOG00000009510smarca4a9686.876ENSRBIG00000038696SMARCA49981.736Rhinopithecus_bieti
ENSHCOG00000009510smarca4a9686.876ENSRROG00000045509SMARCA49586.603Rhinopithecus_roxellana
ENSHCOG00000009510smarca4a9686.876ENSSBOG00000026896SMARCA49390.377Saimiri_boliviensis_boliviensis
ENSHCOG00000009510smarca4a9687.444ENSSHAG00000001642SMARCA49586.778Sarcophilus_harrisii
ENSHCOG00000009510smarca4a9690.693ENSSFOG00015013823smarca49590.354Scleropages_formosus
ENSHCOG00000009510smarca4a9384.941ENSSFOG00015009921-9385.215Scleropages_formosus
ENSHCOG00000009510smarca4a9693.997ENSSMAG00000003200smarca4a9593.990Scophthalmus_maximus
ENSHCOG00000009510smarca4a9983.767ENSSMAG00000014082-9983.241Scophthalmus_maximus
ENSHCOG00000009510smarca4a9689.801ENSSDUG00000017298smarca4a9589.724Seriola_dumerili
ENSHCOG00000009510smarca4a9686.624ENSSDUG00000005388-9982.567Seriola_dumerili
ENSHCOG00000009510smarca4a9695.332ENSSLDG00000024486smarca4a10092.418Seriola_lalandi_dorsalis
ENSHCOG00000009510smarca4a5895.652ENSSARG00000013477SMARCA47895.652Sorex_araneus
ENSHCOG00000009510smarca4a9683.641ENSSPUG00000004558SMARCA49983.041Sphenodon_punctatus
ENSHCOG00000009510smarca4a9694.246ENSSPAG00000004248smarca4a9594.174Stegastes_partitus
ENSHCOG00000009510smarca4a9684.519ENSSPAG00000012533-9584.095Stegastes_partitus
ENSHCOG00000009510smarca4a9686.957ENSSSCG00000013629SMARCA49586.436Sus_scrofa
ENSHCOG00000009510smarca4a5089.147ENSTGUG00000015488-9883.612Taeniopygia_guttata
ENSHCOG00000009510smarca4a9186.867ENSTRUG00000004885smarca4a10087.073Takifugu_rubripes
ENSHCOG00000009510smarca4a9683.514ENSTRUG00000001378SMARCA49482.187Takifugu_rubripes
ENSHCOG00000009510smarca4a7492.199ENSTNIG00000004859-10092.199Tetraodon_nigroviridis
ENSHCOG00000009510smarca4a9784.204ENSTNIG00000004536SMARCA49585.385Tetraodon_nigroviridis
ENSHCOG00000009510smarca4a50100.000ENSTBEG00000000707-52100.000Tupaia_belangeri
ENSHCOG00000009510smarca4a9684.340ENSTTRG00000009519SMARCA49583.459Tursiops_truncatus
ENSHCOG00000009510smarca4a9686.812ENSUAMG00000014661SMARCA49586.538Ursus_americanus
ENSHCOG00000009510smarca4a9782.947ENSUMAG00000022005SMARCA49591.101Ursus_maritimus
ENSHCOG00000009510smarca4a9786.773ENSVVUG00000017820SMARCA49584.423Vulpes_vulpes
ENSHCOG00000009510smarca4a9783.942ENSXETG00000009355smarca49982.981Xenopus_tropicalis
ENSHCOG00000009510smarca4a9683.602ENSXCOG00000013494-9083.412Xiphophorus_couchianus
ENSHCOG00000009510smarca4a9685.253ENSXMAG00000007030-9484.258Xiphophorus_maculatus
ENSHCOG00000009510smarca4a9691.555ENSXMAG00000006321smarca4a10088.503Xiphophorus_maculatus

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