EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000009512 (Gene tree)
Gene ID: 109526929
Gene Symbol: cnot6l
Alias: zgc:111987
Full Name: CCR4-NOT transcription complex subunit 6-like
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 6043 bases
Position: chrKV880271.1:236930-242972
Accession: 109526929
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000007450	Exo_endo_phos	PF03372.23	2.6e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000001961	-	1680	XM_019888517	ENSHCOP00000007450	559 (aa)	XP_019744076	-

Gene Model

Click here to download ENSHCOG00000009512's gene model file

Pathways

Pathway ID	Pathway Name	Source
hcq03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000009512's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000009512	cnot6l	99	67.372	ENSHCOG00000016176	cnot6b	99	67.901

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000009512	cnot6l	94	76.525	ENSG00000138767	CNOT6L	100	89.241	Homo_sapiens
ENSHCOG00000009512	cnot6l	100	79.232	ENSAPOG00000005894	cnot6l	100	79.581	Acanthochromis_polyacanthus
ENSHCOG00000009512	cnot6l	94	76.340	ENSAMEG00000005570	CNOT6L	99	73.905	Ailuropoda_melanoleuca
ENSHCOG00000009512	cnot6l	100	80.035	ENSACIG00000002515	cnot6l	100	80.385	Amphilophus_citrinellus
ENSHCOG00000009512	cnot6l	100	76.357	ENSAOCG00000006705	cnot6l	100	76.708	Amphiprion_ocellaris
ENSHCOG00000009512	cnot6l	100	77.975	ENSAPEG00000020035	cnot6l	100	78.330	Amphiprion_percula
ENSHCOG00000009512	cnot6l	100	80.911	ENSATEG00000008774	cnot6l	100	80.736	Anabas_testudineus
ENSHCOG00000009512	cnot6l	94	75.919	ENSAPLG00000003448	CNOT6L	99	73.171	Anas_platyrhynchos
ENSHCOG00000009512	cnot6l	99	75.132	ENSACAG00000012099	CNOT6L	99	74.427	Anolis_carolinensis
ENSHCOG00000009512	cnot6l	94	76.525	ENSANAG00000023917	CNOT6L	99	74.081	Aotus_nancymaae
ENSHCOG00000009512	cnot6l	100	78.984	ENSACLG00000000879	cnot6l	100	79.335	Astatotilapia_calliptera
ENSHCOG00000009512	cnot6l	100	76.883	ENSAMXG00000008943	cnot6l	98	76.708	Astyanax_mexicanus
ENSHCOG00000009512	cnot6l	94	76.525	ENSBTAG00000049571	CNOT6L	99	74.081	Bos_taurus
ENSHCOG00000009512	cnot6l	94	76.525	ENSCJAG00000014846	CNOT6L	99	74.081	Callithrix_jacchus
ENSHCOG00000009512	cnot6l	94	76.525	ENSCAFG00000008699	CNOT6L	99	74.081	Canis_familiaris
ENSHCOG00000009512	cnot6l	94	76.252	ENSCAFG00020011108	CNOT6L	99	73.814	Canis_lupus_dingo
ENSHCOG00000009512	cnot6l	94	76.525	ENSCHIG00000006297	CNOT6L	99	74.081	Capra_hircus
ENSHCOG00000009512	cnot6l	94	76.525	ENSTSYG00000009068	CNOT6L	99	74.081	Carlito_syrichta
ENSHCOG00000009512	cnot6l	85	86.842	ENSCPOG00000010337	CNOT6L	99	86.842	Cavia_porcellus
ENSHCOG00000009512	cnot6l	94	76.525	ENSCCAG00000025000	CNOT6L	99	74.081	Cebus_capucinus
ENSHCOG00000009512	cnot6l	94	76.525	ENSCATG00000029623	CNOT6L	99	74.081	Cercocebus_atys
ENSHCOG00000009512	cnot6l	99	74.341	ENSCLAG00000004598	CNOT6L	99	73.555	Chinchilla_lanigera
ENSHCOG00000009512	cnot6l	94	76.525	ENSCSAG00000004580	CNOT6L	99	74.081	Chlorocebus_sabaeus
ENSHCOG00000009512	cnot6l	69	78.000	ENSCHOG00000001108	-	68	61.250	Choloepus_hoffmanni
ENSHCOG00000009512	cnot6l	94	76.438	ENSCPBG00000019403	CNOT6L	99	73.814	Chrysemys_picta_bellii
ENSHCOG00000009512	cnot6l	94	76.525	ENSCANG00000028583	CNOT6L	99	74.081	Colobus_angolensis_palliatus
ENSHCOG00000009512	cnot6l	94	75.786	ENSCGRG00001022099	Cnot6l	99	73.205	Cricetulus_griseus_chok1gshd
ENSHCOG00000009512	cnot6l	99	70.650	ENSCGRG00000000543	Cnot6l	99	72.504	Cricetulus_griseus_crigri
ENSHCOG00000009512	cnot6l	69	85.530	ENSCSEG00000010395	-	91	85.530	Cynoglossus_semilaevis
ENSHCOG00000009512	cnot6l	99	78.975	ENSCSEG00000014001	cnot6l	99	78.975	Cynoglossus_semilaevis
ENSHCOG00000009512	cnot6l	95	81.618	ENSCVAG00000021683	cnot6l	95	81.181	Cyprinodon_variegatus
ENSHCOG00000009512	cnot6l	99	78.483	ENSDARG00000054597	cnot6l	98	78.483	Danio_rerio
ENSHCOG00000009512	cnot6l	94	68.440	ENSDNOG00000004229	CNOT6L	95	66.957	Dasypus_novemcinctus
ENSHCOG00000009512	cnot6l	99	66.432	ENSDORG00000011458	Cnot6l	99	65.905	Dipodomys_ordii
ENSHCOG00000009512	cnot6l	99	65.858	ENSEBUG00000004849	cnot6l	99	64.991	Eptatretus_burgeri
ENSHCOG00000009512	cnot6l	85	76.375	ENSEASG00005016429	CNOT6L	91	76.171	Equus_asinus_asinus
ENSHCOG00000009512	cnot6l	88	75.794	ENSECAG00000001582	CNOT6L	87	76.171	Equus_caballus
ENSHCOG00000009512	cnot6l	99	77.797	ENSELUG00000013353	cnot6l	87	77.680	Esox_lucius
ENSHCOG00000009512	cnot6l	94	76.525	ENSFCAG00000008322	CNOT6L	99	74.081	Felis_catus
ENSHCOG00000009512	cnot6l	94	76.909	ENSFALG00000008515	CNOT6L	99	74.296	Ficedula_albicollis
ENSHCOG00000009512	cnot6l	99	74.517	ENSFDAG00000007719	CNOT6L	94	73.730	Fukomys_damarensis
ENSHCOG00000009512	cnot6l	100	73.473	ENSFHEG00000012364	cnot6l	100	73.298	Fundulus_heteroclitus
ENSHCOG00000009512	cnot6l	85	73.554	ENSGMOG00000000730	cnot6l	99	73.140	Gadus_morhua
ENSHCOG00000009512	cnot6l	90	60.588	ENSGMOG00000011077	-	99	60.000	Gadus_morhua
ENSHCOG00000009512	cnot6l	94	76.580	ENSGALG00000010333	CNOT6L	90	73.768	Gallus_gallus
ENSHCOG00000009512	cnot6l	95	81.985	ENSGAFG00000006105	cnot6l	99	81.400	Gambusia_affinis
ENSHCOG00000009512	cnot6l	87	75.453	ENSGAGG00000008605	CNOT6L	94	74.849	Gopherus_agassizii
ENSHCOG00000009512	cnot6l	94	76.525	ENSGGOG00000023412	CNOT6L	97	74.081	Gorilla_gorilla
ENSHCOG00000009512	cnot6l	100	79.159	ENSHBUG00000004755	cnot6l	95	80.982	Haplochromis_burtoni
ENSHCOG00000009512	cnot6l	99	74.517	ENSHGLG00000006452	CNOT6L	99	73.730	Heterocephalus_glaber_female
ENSHCOG00000009512	cnot6l	99	74.517	ENSHGLG00100012384	CNOT6L	97	73.730	Heterocephalus_glaber_male
ENSHCOG00000009512	cnot6l	100	76.182	ENSIPUG00000009879	cnot6l	100	75.742	Ictalurus_punctatus
ENSHCOG00000009512	cnot6l	94	76.525	ENSSTOG00000015293	CNOT6L	99	74.081	Ictidomys_tridecemlineatus
ENSHCOG00000009512	cnot6l	94	75.970	ENSJJAG00000020583	Cnot6l	99	73.555	Jaculus_jaculus
ENSHCOG00000009512	cnot6l	100	78.360	ENSKMAG00000004165	cnot6l	100	78.534	Kryptolebias_marmoratus
ENSHCOG00000009512	cnot6l	100	79.685	ENSLBEG00000027202	cnot6l	100	78.984	Labrus_bergylta
ENSHCOG00000009512	cnot6l	96	76.321	ENSLACG00000004684	CNOT6L	97	76.471	Latimeria_chalumnae
ENSHCOG00000009512	cnot6l	99	75.088	ENSLOCG00000007420	cnot6l	91	74.296	Lepisosteus_oculatus
ENSHCOG00000009512	cnot6l	94	76.525	ENSLAFG00000011449	CNOT6L	99	72.213	Loxodonta_africana
ENSHCOG00000009512	cnot6l	94	76.525	ENSMFAG00000044296	CNOT6L	99	74.081	Macaca_fascicularis
ENSHCOG00000009512	cnot6l	94	76.525	ENSMMUG00000045609	CNOT6L	98	74.081	Macaca_mulatta
ENSHCOG00000009512	cnot6l	94	76.525	ENSMNEG00000041259	CNOT6L	99	74.081	Macaca_nemestrina
ENSHCOG00000009512	cnot6l	94	76.525	ENSMLEG00000029198	CNOT6L	98	74.081	Mandrillus_leucophaeus
ENSHCOG00000009512	cnot6l	94	82.931	ENSMAMG00000016954	cnot6l	98	80.565	Mastacembelus_armatus
ENSHCOG00000009512	cnot6l	100	78.984	ENSMZEG00005020235	cnot6l	100	79.335	Maylandia_zebra
ENSHCOG00000009512	cnot6l	94	76.580	ENSMGAG00000005144	CNOT6L	99	73.768	Meleagris_gallopavo
ENSHCOG00000009512	cnot6l	99	73.286	ENSMICG00000017026	CNOT6L	99	73.730	Microcebus_murinus
ENSHCOG00000009512	cnot6l	94	75.786	ENSMOCG00000009451	Cnot6l	99	73.205	Microtus_ochrogaster
ENSHCOG00000009512	cnot6l	100	80.385	ENSMMOG00000014621	cnot6l	100	79.860	Mola_mola
ENSHCOG00000009512	cnot6l	94	76.340	ENSMODG00000011744	CNOT6L	74	73.730	Monodelphis_domestica
ENSHCOG00000009512	cnot6l	100	80.560	ENSMALG00000006354	cnot6l	100	79.723	Monopterus_albus
ENSHCOG00000009512	cnot6l	94	75.786	MGP_CAROLIEiJ_G0027429	Cnot6l	99	78.211	Mus_caroli
ENSHCOG00000009512	cnot6l	94	75.786	ENSMUSG00000034724	Cnot6l	99	78.211	Mus_musculus
ENSHCOG00000009512	cnot6l	94	75.786	MGP_PahariEiJ_G0017207	Cnot6l	99	73.205	Mus_pahari
ENSHCOG00000009512	cnot6l	94	75.786	MGP_SPRETEiJ_G0028426	Cnot6l	99	73.205	Mus_spretus
ENSHCOG00000009512	cnot6l	90	71.650	ENSMPUG00000003895	CNOT6L	99	69.358	Mustela_putorius_furo
ENSHCOG00000009512	cnot6l	88	75.842	ENSMLUG00000000936	CNOT6L	99	73.271	Myotis_lucifugus
ENSHCOG00000009512	cnot6l	94	75.601	ENSNGAG00000019803	Cnot6l	99	73.030	Nannospalax_galili
ENSHCOG00000009512	cnot6l	84	78.719	ENSNBRG00000016345	cnot6l	80	75.781	Neolamprologus_brichardi
ENSHCOG00000009512	cnot6l	94	76.525	ENSNLEG00000028820	CNOT6L	99	74.081	Nomascus_leucogenys
ENSHCOG00000009512	cnot6l	80	59.565	ENSMEUG00000009767	-	77	59.695	Notamacropus_eugenii
ENSHCOG00000009512	cnot6l	99	74.517	ENSODEG00000004161	CNOT6L	98	73.730	Octodon_degus
ENSHCOG00000009512	cnot6l	100	78.646	ENSONIG00000013992	cnot6l	97	78.993	Oreochromis_niloticus
ENSHCOG00000009512	cnot6l	94	76.155	ENSOANG00000003561	CNOT6L	99	74.211	Ornithorhynchus_anatinus
ENSHCOG00000009512	cnot6l	94	76.525	ENSOCUG00000002497	CNOT6L	99	74.081	Oryctolagus_cuniculus
ENSHCOG00000009512	cnot6l	100	78.975	ENSORLG00000018874	cnot6l	100	78.799	Oryzias_latipes
ENSHCOG00000009512	cnot6l	100	78.185	ENSOMEG00000010026	cnot6l	100	78.185	Oryzias_melastigma
ENSHCOG00000009512	cnot6l	94	73.260	ENSOGAG00000012122	CNOT6L	99	69.618	Otolemur_garnettii
ENSHCOG00000009512	cnot6l	94	76.525	ENSOARG00000017771	CNOT6L	99	74.081	Ovis_aries
ENSHCOG00000009512	cnot6l	84	86.842	ENSPPAG00000034242	-	98	86.842	Pan_paniscus
ENSHCOG00000009512	cnot6l	94	73.567	ENSPPAG00000030178	-	99	71.278	Pan_paniscus
ENSHCOG00000009512	cnot6l	94	76.525	ENSPPRG00000008857	CNOT6L	99	74.081	Panthera_pardus
ENSHCOG00000009512	cnot6l	94	76.525	ENSPTIG00000015698	CNOT6L	99	74.081	Panthera_tigris_altaica
ENSHCOG00000009512	cnot6l	94	76.525	ENSPTRG00000016198	CNOT6L	99	74.081	Pan_troglodytes
ENSHCOG00000009512	cnot6l	84	86.842	ENSPTRG00000045291	-	99	86.842	Pan_troglodytes
ENSHCOG00000009512	cnot6l	94	76.525	ENSPANG00000007831	CNOT6L	99	74.081	Papio_anubis
ENSHCOG00000009512	cnot6l	100	77.583	ENSPKIG00000002892	cnot6l	100	77.058	Paramormyrops_kingsleyae
ENSHCOG00000009512	cnot6l	94	76.438	ENSPSIG00000016241	CNOT6L	99	74.427	Pelodiscus_sinensis
ENSHCOG00000009512	cnot6l	99	76.325	ENSPMGG00000004021	cnot6l	99	76.325	Periophthalmus_magnuspinnatus
ENSHCOG00000009512	cnot6l	94	75.786	ENSPEMG00000011554	Cnot6l	99	73.205	Peromyscus_maniculatus_bairdii
ENSHCOG00000009512	cnot6l	94	66.000	ENSPMAG00000005706	cnot6l	99	63.855	Petromyzon_marinus
ENSHCOG00000009512	cnot6l	94	75.786	ENSPCIG00000027504	-	99	74.008	Phascolarctos_cinereus
ENSHCOG00000009512	cnot6l	100	80.560	ENSPFOG00000013163	cnot6l	100	80.035	Poecilia_formosa
ENSHCOG00000009512	cnot6l	100	80.210	ENSPLAG00000019862	cnot6l	100	79.685	Poecilia_latipinna
ENSHCOG00000009512	cnot6l	100	80.385	ENSPMEG00000015834	cnot6l	100	79.860	Poecilia_mexicana
ENSHCOG00000009512	cnot6l	100	80.385	ENSPREG00000003561	cnot6l	100	79.860	Poecilia_reticulata
ENSHCOG00000009512	cnot6l	94	76.525	ENSPPYG00000014869	CNOT6L	99	74.081	Pongo_abelii
ENSHCOG00000009512	cnot6l	94	47.388	ENSPCAG00000016617	CNOT6L	81	86.486	Procavia_capensis
ENSHCOG00000009512	cnot6l	94	76.525	ENSPCOG00000014669	CNOT6L	99	74.081	Propithecus_coquereli
ENSHCOG00000009512	cnot6l	83	83.784	ENSPVAG00000002690	CNOT6L	78	83.784	Pteropus_vampyrus
ENSHCOG00000009512	cnot6l	86	78.367	ENSPNYG00000006717	cnot6l	92	76.062	Pundamilia_nyererei
ENSHCOG00000009512	cnot6l	100	76.440	ENSPNAG00000003537	cnot6l	98	76.265	Pygocentrus_nattereri
ENSHCOG00000009512	cnot6l	94	75.786	ENSRNOG00000002075	Cnot6l	99	73.205	Rattus_norvegicus
ENSHCOG00000009512	cnot6l	94	76.525	ENSRBIG00000027644	CNOT6L	99	74.081	Rhinopithecus_bieti
ENSHCOG00000009512	cnot6l	94	76.525	ENSRROG00000031003	CNOT6L	99	74.081	Rhinopithecus_roxellana
ENSHCOG00000009512	cnot6l	94	76.525	ENSSBOG00000028521	CNOT6L	99	74.081	Saimiri_boliviensis_boliviensis
ENSHCOG00000009512	cnot6l	94	76.340	ENSSHAG00000006072	CNOT6L	99	73.730	Sarcophilus_harrisii
ENSHCOG00000009512	cnot6l	99	78.445	ENSSFOG00015019044	cnot6l	99	78.092	Scleropages_formosus
ENSHCOG00000009512	cnot6l	99	80.247	ENSSMAG00000015568	cnot6l	99	79.365	Scophthalmus_maximus
ENSHCOG00000009512	cnot6l	99	80.952	ENSSDUG00000018426	cnot6l	99	80.071	Seriola_dumerili
ENSHCOG00000009512	cnot6l	99	80.776	ENSSLDG00000000335	cnot6l	99	79.894	Seriola_lalandi_dorsalis
ENSHCOG00000009512	cnot6l	99	74.603	ENSSPUG00000002016	CNOT6L	99	73.898	Sphenodon_punctatus
ENSHCOG00000009512	cnot6l	100	80.210	ENSSPAG00000022932	cnot6l	100	80.560	Stegastes_partitus
ENSHCOG00000009512	cnot6l	94	76.525	ENSSSCG00000008989	CNOT6L	99	74.081	Sus_scrofa
ENSHCOG00000009512	cnot6l	94	76.909	ENSTGUG00000001737	-	99	74.120	Taeniopygia_guttata
ENSHCOG00000009512	cnot6l	100	81.261	ENSTRUG00000004332	cnot6l	100	80.385	Takifugu_rubripes
ENSHCOG00000009512	cnot6l	100	79.159	ENSTNIG00000016717	cnot6l	100	78.634	Tetraodon_nigroviridis
ENSHCOG00000009512	cnot6l	85	71.283	ENSTBEG00000016519	CNOT6L	96	71.079	Tupaia_belangeri
ENSHCOG00000009512	cnot6l	85	75.967	ENSTTRG00000005606	CNOT6L	99	75.764	Tursiops_truncatus
ENSHCOG00000009512	cnot6l	94	76.340	ENSUAMG00000026982	CNOT6L	99	73.905	Ursus_americanus
ENSHCOG00000009512	cnot6l	94	76.340	ENSUMAG00000007955	CNOT6L	99	73.905	Ursus_maritimus
ENSHCOG00000009512	cnot6l	99	70.123	ENSVPAG00000010892	CNOT6L	99	70.578	Vicugna_pacos
ENSHCOG00000009512	cnot6l	89	86.095	ENSVVUG00000024858	CNOT6L	99	86.095	Vulpes_vulpes
ENSHCOG00000009512	cnot6l	99	71.705	ENSXETG00000000372	cnot6l	99	70.928	Xenopus_tropicalis
ENSHCOG00000009512	cnot6l	100	80.560	ENSXMAG00000002900	cnot6l	100	78.819	Xiphophorus_maculatus