EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000009746 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 18367 bases
Position: chrKV879892.1:169523-187889
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000007618	zf-CCHC	PF00098.23	8.3e-09	1	2
ENSHCOP00000007618	zf-CCHC	PF00098.23	8.3e-09	2	2
ENSHCOP00000007633	zf-CCHC	PF00098.23	8.9e-09	1	2
ENSHCOP00000007633	zf-CCHC	PF00098.23	8.9e-09	2	2
ENSHCOP00000007618	PAP_assoc	PF03828.19	5.5e-16	1	1
ENSHCOP00000007633	PAP_assoc	PF03828.19	9.5e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000001696	-	2007	-	ENSHCOP00000007618	668 (aa)	-	-
ENSHCOT00000001662	-	1977	-	ENSHCOP00000007633	658 (aa)	-	-

Gene Model

Click here to download ENSHCOG00000009746's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000009746's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000009746	-	50	54.701	ENSHCOG00000006100	-	94	56.069

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000009746	-	97	60.793	ENSG00000134744	TUT4	98	61.261	Homo_sapiens
ENSHCOG00000009746	-	54	75.204	ENSAPOG00000018983	-	99	75.204	Acanthochromis_polyacanthus
ENSHCOG00000009746	-	97	61.696	ENSAMEG00000009340	TUT4	57	60.965	Ailuropoda_melanoleuca
ENSHCOG00000009746	-	50	69.697	ENSACIG00000018887	-	90	47.709	Amphilophus_citrinellus
ENSHCOG00000009746	-	97	79.817	ENSACIG00000018199	TUT4	99	76.052	Amphilophus_citrinellus
ENSHCOG00000009746	-	99	82.556	ENSAOCG00000007862	TUT4	62	81.955	Amphiprion_ocellaris
ENSHCOG00000009746	-	99	82.556	ENSAPEG00000019857	TUT4	65	81.955	Amphiprion_percula
ENSHCOG00000009746	-	54	66.406	ENSATEG00000022516	-	93	56.176	Anabas_testudineus
ENSHCOG00000009746	-	97	82.000	ENSATEG00000003823	TUT4	64	81.288	Anabas_testudineus
ENSHCOG00000009746	-	98	65.512	ENSAPLG00000006345	TUT4	58	64.330	Anas_platyrhynchos
ENSHCOG00000009746	-	98	61.848	ENSACAG00000008282	TUT4	61	58.699	Anolis_carolinensis
ENSHCOG00000009746	-	97	58.270	ENSANAG00000013486	TUT4	61	57.871	Aotus_nancymaae
ENSHCOG00000009746	-	97	80.581	ENSACLG00000023312	TUT4	65	79.817	Astatotilapia_calliptera
ENSHCOG00000009746	-	96	69.394	ENSAMXG00000007030	TUT4	62	69.394	Astyanax_mexicanus
ENSHCOG00000009746	-	97	61.743	ENSBTAG00000002721	TUT4	58	61.209	Bos_taurus
ENSHCOG00000009746	-	97	60.793	ENSCJAG00000021588	TUT4	58	73.933	Callithrix_jacchus
ENSHCOG00000009746	-	97	61.527	ENSCAFG00000003734	TUT4	58	60.615	Canis_familiaris
ENSHCOG00000009746	-	91	64.078	ENSCAFG00020010923	-	94	63.592	Canis_lupus_dingo
ENSHCOG00000009746	-	99	59.596	ENSCHIG00000023944	TUT4	57	59.393	Capra_hircus
ENSHCOG00000009746	-	97	60.557	ENSTSYG00000009885	TUT4	62	60.704	Carlito_syrichta
ENSHCOG00000009746	-	97	55.007	ENSCAPG00000005680	TUT4	61	55.456	Cavia_aperea
ENSHCOG00000009746	-	97	60.296	ENSCPOG00000005086	TUT4	59	60.997	Cavia_porcellus
ENSHCOG00000009746	-	54	83.849	ENSCCAG00000036903	TUT4	52	75.352	Cebus_capucinus
ENSHCOG00000009746	-	53	66.856	ENSCCAG00000025142	-	73	55.758	Cebus_capucinus
ENSHCOG00000009746	-	97	60.850	ENSCATG00000024618	TUT4	54	72.383	Cercocebus_atys
ENSHCOG00000009746	-	97	62.369	ENSCLAG00000005255	TUT4	57	61.883	Chinchilla_lanigera
ENSHCOG00000009746	-	97	60.704	ENSCSAG00000001277	TUT4	58	60.819	Chlorocebus_sabaeus
ENSHCOG00000009746	-	98	83.905	ENSCPBG00000014796	TUT4	58	80.990	Chrysemys_picta_bellii
ENSHCOG00000009746	-	97	60.408	ENSCANG00000036212	TUT4	58	60.377	Colobus_angolensis_palliatus
ENSHCOG00000009746	-	97	61.997	ENSCGRG00001020315	-	57	62.332	Cricetulus_griseus_chok1gshd
ENSHCOG00000009746	-	97	61.997	ENSCGRG00000017571	Tut4	57	62.332	Cricetulus_griseus_crigri
ENSHCOG00000009746	-	96	79.070	ENSCSEG00000002476	TUT4	96	79.845	Cynoglossus_semilaevis
ENSHCOG00000009746	-	98	78.030	ENSCVAG00000012659	TUT4	64	77.727	Cyprinodon_variegatus
ENSHCOG00000009746	-	100	66.131	ENSDARG00000101404	CABZ01065131.1	100	66.082	Danio_rerio
ENSHCOG00000009746	-	97	60.882	ENSDNOG00000013920	TUT4	57	61.176	Dasypus_novemcinctus
ENSHCOG00000009746	-	97	61.516	ENSDORG00000027891	Tut4	57	61.367	Dipodomys_ordii
ENSHCOG00000009746	-	54	63.043	ENSEBUG00000009834	TUT4	59	62.943	Eptatretus_burgeri
ENSHCOG00000009746	-	99	59.800	ENSECAG00000021261	TUT4	57	61.209	Equus_caballus
ENSHCOG00000009746	-	99	70.827	ENSELUG00000024167	TUT4	64	72.504	Esox_lucius
ENSHCOG00000009746	-	97	61.730	ENSFCAG00000003246	TUT4	58	60.819	Felis_catus
ENSHCOG00000009746	-	99	64.671	ENSFALG00000005607	TUT4	61	61.373	Ficedula_albicollis
ENSHCOG00000009746	-	97	61.743	ENSFDAG00000016676	TUT4	57	61.054	Fukomys_damarensis
ENSHCOG00000009746	-	98	78.015	ENSFHEG00000002296	-	98	77.710	Fundulus_heteroclitus
ENSHCOG00000009746	-	98	68.731	ENSGMOG00000001281	TUT4	73	68.468	Gadus_morhua
ENSHCOG00000009746	-	98	64.382	ENSGALG00000010629	TUT4	56	63.174	Gallus_gallus
ENSHCOG00000009746	-	100	74.151	ENSGAFG00000011427	-	100	74.151	Gambusia_affinis
ENSHCOG00000009746	-	97	76.408	ENSGACG00000005282	-	75	74.149	Gasterosteus_aculeatus
ENSHCOG00000009746	-	98	62.707	ENSGAGG00000020531	TUT4	53	60.964	Gopherus_agassizii
ENSHCOG00000009746	-	94	80.127	ENSHBUG00000008564	-	99	79.332	Haplochromis_burtoni
ENSHCOG00000009746	-	97	61.448	ENSHGLG00000000804	TUT4	57	60.908	Heterocephalus_glaber_female
ENSHCOG00000009746	-	97	61.448	ENSHGLG00100002051	TUT4	58	60.908	Heterocephalus_glaber_male
ENSHCOG00000009746	-	65	79.814	ENSIPUG00000002638	zcchc11	66	64.869	Ictalurus_punctatus
ENSHCOG00000009746	-	97	60.972	ENSSTOG00000015611	TUT4	57	60.825	Ictidomys_tridecemlineatus
ENSHCOG00000009746	-	100	75.942	ENSKMAG00000017970	TUT4	100	75.652	Kryptolebias_marmoratus
ENSHCOG00000009746	-	97	82.569	ENSLBEG00000006518	TUT4	63	82.110	Labrus_bergylta
ENSHCOG00000009746	-	97	61.765	ENSLACG00000010748	TUT4	58	58.011	Latimeria_chalumnae
ENSHCOG00000009746	-	99	69.688	ENSLOCG00000006248	TUT4	67	69.242	Lepisosteus_oculatus
ENSHCOG00000009746	-	97	61.786	ENSLAFG00000003763	TUT4	57	71.882	Loxodonta_africana
ENSHCOG00000009746	-	97	60.704	ENSMFAG00000011842	TUT4	58	60.819	Macaca_fascicularis
ENSHCOG00000009746	-	91	61.466	ENSMMUG00000017023	TUT4	57	61.778	Macaca_mulatta
ENSHCOG00000009746	-	97	60.262	ENSMNEG00000009839	TUT4	60	60.553	Macaca_nemestrina
ENSHCOG00000009746	-	97	60.850	ENSMLEG00000036158	TUT4	58	60.819	Mandrillus_leucophaeus
ENSHCOG00000009746	-	97	82.154	ENSMAMG00000014890	TUT4	63	81.288	Mastacembelus_armatus
ENSHCOG00000009746	-	97	80.581	ENSMZEG00005017227	TUT4	63	79.817	Maylandia_zebra
ENSHCOG00000009746	-	97	65.053	ENSMGAG00000011185	TUT4	70	63.580	Meleagris_gallopavo
ENSHCOG00000009746	-	97	60.965	ENSMICG00000015853	TUT4	57	60.761	Microcebus_murinus
ENSHCOG00000009746	-	56	55.890	ENSMMOG00000017546	-	53	57.614	Mola_mola
ENSHCOG00000009746	-	100	74.521	ENSMMOG00000016870	-	100	74.374	Mola_mola
ENSHCOG00000009746	-	98	61.778	ENSMODG00000000618	TUT4	59	63.079	Monodelphis_domestica
ENSHCOG00000009746	-	97	77.676	ENSMALG00000014488	-	96	77.217	Monopterus_albus
ENSHCOG00000009746	-	97	61.353	MGP_CAROLIEiJ_G0026268	Tut4	57	62.500	Mus_caroli
ENSHCOG00000009746	-	97	61.353	ENSMUSG00000034610	Tut4	57	62.500	Mus_musculus
ENSHCOG00000009746	-	97	61.203	MGP_PahariEiJ_G0028601	Tut4	57	62.349	Mus_pahari
ENSHCOG00000009746	-	97	61.353	MGP_SPRETEiJ_G0027237	Tut4	57	62.500	Mus_spretus
ENSHCOG00000009746	-	97	61.401	ENSMPUG00000006880	TUT4	56	60.805	Mustela_putorius_furo
ENSHCOG00000009746	-	97	60.534	ENSMLUG00000001067	TUT4	57	60.954	Myotis_lucifugus
ENSHCOG00000009746	-	100	77.286	ENSNBRG00000005683	-	100	76.696	Neolamprologus_brichardi
ENSHCOG00000009746	-	97	61.664	ENSNLEG00000017998	TUT4	58	61.813	Nomascus_leucogenys
ENSHCOG00000009746	-	97	61.927	ENSMEUG00000003865	TUT4	56	62.145	Notamacropus_eugenii
ENSHCOG00000009746	-	97	60.651	ENSODEG00000007328	TUT4	57	60.619	Octodon_degus
ENSHCOG00000009746	-	97	81.193	ENSONIG00000019455	TUT4	72	77.108	Oreochromis_niloticus
ENSHCOG00000009746	-	88	60.606	ENSOANG00000012864	TUT4	57	62.460	Ornithorhynchus_anatinus
ENSHCOG00000009746	-	97	60.438	ENSOCUG00000002390	TUT4	63	74.324	Oryctolagus_cuniculus
ENSHCOG00000009746	-	100	70.044	ENSORLG00000013135	-	100	70.044	Oryzias_latipes
ENSHCOG00000009746	-	100	69.897	ENSORLG00020002631	-	100	69.897	Oryzias_latipes_hni
ENSHCOG00000009746	-	100	69.737	ENSORLG00015001219	-	100	69.737	Oryzias_latipes_hsok
ENSHCOG00000009746	-	98	73.668	ENSOMEG00000015574	-	100	70.102	Oryzias_melastigma
ENSHCOG00000009746	-	97	59.503	ENSOGAG00000005425	TUT4	58	59.124	Otolemur_garnettii
ENSHCOG00000009746	-	99	60.462	ENSOARG00000005494	TUT4	58	60.260	Ovis_aries
ENSHCOG00000009746	-	97	60.408	ENSPPAG00000037653	TUT4	57	62.620	Pan_paniscus
ENSHCOG00000009746	-	97	61.730	ENSPPRG00000020521	TUT4	58	60.819	Panthera_pardus
ENSHCOG00000009746	-	97	61.730	ENSPTIG00000010511	TUT4	58	60.819	Panthera_tigris_altaica
ENSHCOG00000009746	-	97	60.850	ENSPTRG00000000740	TUT4	58	60.819	Pan_troglodytes
ENSHCOG00000009746	-	97	58.746	ENSPANG00000005042	TUT4	58	58.721	Papio_anubis
ENSHCOG00000009746	-	98	70.579	ENSPKIG00000004670	TUT4	91	70.509	Paramormyrops_kingsleyae
ENSHCOG00000009746	-	98	65.517	ENSPSIG00000016704	TUT4	57	64.186	Pelodiscus_sinensis
ENSHCOG00000009746	-	58	62.632	ENSPMGG00000015621	-	66	93.277	Periophthalmus_magnuspinnatus
ENSHCOG00000009746	-	99	59.942	ENSPCIG00000022380	TUT4	60	58.949	Phascolarctos_cinereus
ENSHCOG00000009746	-	98	69.432	ENSPFOG00000002439	TUT4	68	69.970	Poecilia_formosa
ENSHCOG00000009746	-	100	73.560	ENSPLAG00000008701	-	100	73.560	Poecilia_latipinna
ENSHCOG00000009746	-	100	73.412	ENSPMEG00000006996	-	100	73.560	Poecilia_mexicana
ENSHCOG00000009746	-	97	61.595	ENSPPYG00000001347	TUT4	58	61.119	Pongo_abelii
ENSHCOG00000009746	-	97	90.446	ENSPCAG00000013380	TUT4	62	90.446	Procavia_capensis
ENSHCOG00000009746	-	97	60.940	ENSPCOG00000007824	TUT4	60	60.557	Propithecus_coquereli
ENSHCOG00000009746	-	97	61.686	ENSPVAG00000009804	TUT4	59	61.481	Pteropus_vampyrus
ENSHCOG00000009746	-	97	80.734	ENSPNYG00000023175	TUT4	63	79.969	Pundamilia_nyererei
ENSHCOG00000009746	-	97	67.862	ENSPNAG00000022786	TUT4	63	68.601	Pygocentrus_nattereri
ENSHCOG00000009746	-	97	56.452	ENSRBIG00000027989	TUT4	57	56.433	Rhinopithecus_bieti
ENSHCOG00000009746	-	97	61.209	ENSRROG00000034868	TUT4	68	60.997	Rhinopithecus_roxellana
ENSHCOG00000009746	-	53	66.572	ENSSBOG00000020099	-	73	59.425	Saimiri_boliviensis_boliviensis
ENSHCOG00000009746	-	97	60.793	ENSSBOG00000013661	TUT4	62	60.908	Saimiri_boliviensis_boliviensis
ENSHCOG00000009746	-	97	60.661	ENSSHAG00000006231	TUT4	58	60.620	Sarcophilus_harrisii
ENSHCOG00000009746	-	97	71.235	ENSSFOG00015013524	zcchc11	63	72.139	Scleropages_formosus
ENSHCOG00000009746	-	97	80.763	ENSSMAG00000016072	TUT4	68	80.763	Scophthalmus_maximus
ENSHCOG00000009746	-	97	83.511	ENSSDUG00000021923	TUT4	96	82.901	Seriola_dumerili
ENSHCOG00000009746	-	97	83.359	ENSSLDG00000016071	TUT4	63	82.748	Seriola_lalandi_dorsalis
ENSHCOG00000009746	-	100	58.883	ENSSPUG00000013287	TUT4	61	58.714	Sphenodon_punctatus
ENSHCOG00000009746	-	99	75.038	ENSSPAG00000008141	-	97	74.887	Stegastes_partitus
ENSHCOG00000009746	-	97	61.267	ENSSSCG00000003859	TUT4	53	74.830	Sus_scrofa
ENSHCOG00000009746	-	98	65.211	ENSTGUG00000009011	TUT4	54	64.715	Taeniopygia_guttata
ENSHCOG00000009746	-	57	70.379	ENSTRUG00000024719	-	96	70.379	Takifugu_rubripes
ENSHCOG00000009746	-	97	61.022	ENSTTRG00000016142	TUT4	58	60.673	Tursiops_truncatus
ENSHCOG00000009746	-	98	62.687	ENSUAMG00000000759	TUT4	59	78.061	Ursus_americanus
ENSHCOG00000009746	-	97	61.424	ENSUMAG00000022669	TUT4	58	60.651	Ursus_maritimus
ENSHCOG00000009746	-	97	57.664	ENSVPAG00000000910	TUT4	53	57.956	Vicugna_pacos
ENSHCOG00000009746	-	98	62.033	ENSVVUG00000002703	TUT4	88	63.430	Vulpes_vulpes
ENSHCOG00000009746	-	98	59.009	ENSXETG00000008061	tut4	70	55.954	Xenopus_tropicalis
ENSHCOG00000009746	-	100	74.260	ENSXCOG00000007204	-	100	74.260	Xiphophorus_couchianus
ENSHCOG00000009746	-	100	74.408	ENSXMAG00000000751	-	100	74.408	Xiphophorus_maculatus