EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000009753 (Gene tree)
Gene ID: 109516853
Gene Symbol: rc3h1b
Alias: si:dkey-60b12.1
Full Name: roquin-1-like
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 9750 bases
Position: chrKV879980.1:30015-39764
Accession: 109516853
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000007545	zf-CCCH	PF00642.24	0.00017	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000001794	-	3306	XM_019871644	ENSHCOP00000022156	1101 (aa)	XP_019727203	-
ENSHCOT00000001816	-	1452	-	ENSHCOP00000007545	483 (aa)	-	-

Gene Model

Click here to download ENSHCOG00000009753's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000009753's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000009753	rc3h1b	93	89.800	ENSCAFG00020017112	RC3H1	99	89.310	Canis_lupus_dingo
ENSHCOG00000009753	rc3h1b	98	92.144	ENSMALG00000016106	rc3h1b	95	92.144	Monopterus_albus
ENSHCOG00000009753	rc3h1b	94	95.133	ENSMALG00000016581	-	98	95.133	Monopterus_albus
ENSHCOG00000009753	rc3h1b	97	90.249	ENSPMGG00000015037	rc3h1b	97	90.249	Periophthalmus_magnuspinnatus
ENSHCOG00000009753	rc3h1b	93	89.357	ENSPCIG00000002058	RC3H1	97	87.013	Phascolarctos_cinereus
ENSHCOG00000009753	rc3h1b	93	93.736	ENSPNAG00000017240	rc3h1b	94	93.736	Pygocentrus_nattereri
ENSHCOG00000009753	rc3h1b	93	90.244	ENSPNAG00000023439	rc3h1a	100	88.223	Pygocentrus_nattereri
ENSHCOG00000009753	rc3h1b	93	89.800	ENSVVUG00000014201	RC3H1	92	89.310	Vulpes_vulpes