EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000009757 (Gene tree)
Gene ID: 109524377
Gene Symbol: ran
Alias: fc16b04|wu:fc16b04
Full Name: RAN%2C member RAS oncogene family
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 5998 bases
Position: chrKV880218.1:1029071-1035068
Accession: 109524377
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000007683	MMR_HSR1	PF01926.23	0.00012	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000001581	-	1666	XM_019884194	ENSHCOP00000007683	216 (aa)	XP_019739753	UPI00094F3950

Gene Model

Click here to download ENSHCOG00000009757's gene model file

Pathways

Pathway ID	Pathway Name	Source
hcq03008	Ribosome biogenesis in eukaryotes	KEGG
hcq03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000009757's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000009757	ran	73	34.161	ENSHCOG00000004662	rab5c	72	34.161
ENSHCOG00000009757	ran	79	31.351	ENSHCOG00000019468	rab1ba	92	31.351
ENSHCOG00000009757	ran	62	30.597	ENSHCOG00000010707	rab30	72	30.597
ENSHCOG00000009757	ran	74	32.099	ENSHCOG00000000954	-	75	32.099
ENSHCOG00000009757	ran	71	31.677	ENSHCOG00000004086	rab9a	80	31.677
ENSHCOG00000009757	ran	75	32.727	ENSHCOG00000013095	rab25a	78	32.727
ENSHCOG00000009757	ran	73	34.783	ENSHCOG00000020238	-	74	34.783
ENSHCOG00000009757	ran	74	31.481	ENSHCOG00000019224	rab14	75	31.481
ENSHCOG00000009757	ran	72	33.544	ENSHCOG00000002423	rab11bb	72	33.544
ENSHCOG00000009757	ran	74	32.716	ENSHCOG00000010023	-	80	32.716
ENSHCOG00000009757	ran	73	32.515	ENSHCOG00000005652	rab11a	75	32.515
ENSHCOG00000009757	ran	70	32.903	ENSHCOG00000000985	-	76	32.903
ENSHCOG00000009757	ran	74	31.515	ENSHCOG00000006550	-	78	31.515
ENSHCOG00000009757	ran	71	32.051	ENSHCOG00000013919	rab23	76	32.051
ENSHCOG00000009757	ran	76	32.370	ENSHCOG00000009133	zgc:101559	73	32.948
ENSHCOG00000009757	ran	71	31.613	ENSHCOG00000006538	si:dkey-16l2.16	74	31.613
ENSHCOG00000009757	ran	75	31.707	ENSHCOG00000014428	rab2a	77	31.707
ENSHCOG00000009757	ran	74	31.902	ENSHCOG00000004404	rab41	77	31.902
ENSHCOG00000009757	ran	56	31.967	ENSHCOG00000017086	RAB15	61	31.967
ENSHCOG00000009757	ran	74	32.099	ENSHCOG00000001137	rab1ab	80	32.099
ENSHCOG00000009757	ran	80	31.429	ENSHCOG00000002217	rab18b	85	31.429
ENSHCOG00000009757	ran	71	30.435	ENSHCOG00000005802	RAB9A	75	30.435
ENSHCOG00000009757	ran	73	32.317	ENSHCOG00000004225	-	81	32.317
ENSHCOG00000009757	ran	74	30.247	ENSHCOG00000013180	-	75	30.247
ENSHCOG00000009757	ran	74	33.333	ENSHCOG00000007440	rab13	89	33.333
ENSHCOG00000009757	ran	73	32.317	ENSHCOG00000016322	RAB7A	79	32.317
ENSHCOG00000009757	ran	71	31.056	ENSHCOG00000005024	rab9b	80	31.056
ENSHCOG00000009757	ran	69	33.117	ENSHCOG00000007187	rab25b	66	33.117
ENSHCOG00000009757	ran	76	30.058	ENSHCOG00000020527	rab34a	64	30.058

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000009757	ran	99	89.302	ENSG00000132341	RAN	100	91.406	Homo_sapiens
ENSHCOG00000009757	ran	95	85.922	ENSBTAG00000024233	-	95	85.922	Bos_taurus
ENSHCOG00000009757	ran	95	86.408	ENSCAFG00020003142	-	95	86.408	Canis_lupus_dingo
ENSHCOG00000009757	ran	95	82.039	ENSCHIG00000025632	-	95	82.039	Capra_hircus
ENSHCOG00000009757	ran	70	88.742	ENSCSAG00000001906	-	99	88.742	Chlorocebus_sabaeus
ENSHCOG00000009757	ran	75	86.957	ENSCING00000003944	-	100	86.957	Ciona_intestinalis
ENSHCOG00000009757	ran	95	92.718	ENSCANG00000004264	-	95	92.718	Colobus_angolensis_palliatus
ENSHCOG00000009757	ran	95	90.777	ENSCGRG00001009212	-	95	90.777	Cricetulus_griseus_chok1gshd
ENSHCOG00000009757	ran	95	79.512	ENSCGRG00000007401	-	94	79.512	Cricetulus_griseus_crigri
ENSHCOG00000009757	ran	95	90.777	ENSCGRG00000019639	Rasl2-9	95	90.777	Cricetulus_griseus_crigri
ENSHCOG00000009757	ran	95	85.922	ENSDNOG00000031679	-	94	85.922	Dasypus_novemcinctus
ENSHCOG00000009757	ran	64	95.652	ENSLACG00000018793	RAN	94	95.652	Latimeria_chalumnae
ENSHCOG00000009757	ran	95	90.291	ENSMAUG00000015974	-	95	90.291	Mesocricetus_auratus
ENSHCOG00000009757	ran	95	88.479	ENSMICG00000000653	-	96	88.479	Microcebus_murinus
ENSHCOG00000009757	ran	95	86.893	ENSMUSG00000083649	Rasl2-9	95	86.893	Mus_musculus
ENSHCOG00000009757	ran	100	83.333	MGP_SPRETEiJ_G0030206	Rasl2-9	100	83.333	Mus_spretus
ENSHCOG00000009757	ran	82	88.701	MGP_SPRETEiJ_G0028777	-	96	88.701	Mus_spretus
ENSHCOG00000009757	ran	95	78.155	ENSNGAG00000016204	-	95	78.155	Nannospalax_galili
ENSHCOG00000009757	ran	94	93.137	ENSPMGG00000008616	ran	100	93.137	Periophthalmus_magnuspinnatus
ENSHCOG00000009757	ran	88	92.063	ENSPEMG00000010658	-	89	92.063	Peromyscus_maniculatus_bairdii
ENSHCOG00000009757	ran	100	73.733	ENSRBIG00000037389	-	100	73.733	Rhinopithecus_bieti
ENSHCOG00000009757	ran	89	89.637	ENSRROG00000044174	-	97	89.637	Rhinopithecus_roxellana
ENSHCOG00000009757	ran	96	91.304	ENSTRUG00000013749	ran	96	91.304	Takifugu_rubripes
ENSHCOG00000009757	ran	97	89.952	ENSTNIG00000013137	ran	97	89.952	Tetraodon_nigroviridis