EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000009821 (Gene tree)
Gene ID: 109512785
Gene Symbol: xrcc6
Alias: Ku autoantigen|Ku70|g22p1|wu:fi87b06|zgc:64131
Full Name: X-ray repair cross complementing 6
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 3739 bases
Position: chrKV879691.1:652309-656047
Accession: 109512785
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000007729	SAP	PF02037.27	1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000001503	-	2106	XM_019864780	ENSHCOP00000007729	609 (aa)	XP_019720339	UPI00094E31CA

Gene Model

Click here to download ENSHCOG00000009821's gene model file

Pathways

Pathway ID	Pathway Name	Source
hcq03450	Non-homologous end-joining	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000009821's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000009821	xrcc6	99	53.947	ENSG00000196419	XRCC6	99	53.618	Homo_sapiens
ENSHCOG00000009821	xrcc6	99	80.131	ENSAPOG00000012704	xrcc6	100	79.967	Acanthochromis_polyacanthus
ENSHCOG00000009821	xrcc6	100	81.475	ENSACIG00000021277	xrcc6	100	81.475	Amphilophus_citrinellus
ENSHCOG00000009821	xrcc6	100	80.000	ENSAOCG00000021344	xrcc6	100	80.000	Amphiprion_ocellaris
ENSHCOG00000009821	xrcc6	100	80.492	ENSAPEG00000020712	xrcc6	100	80.492	Amphiprion_percula
ENSHCOG00000009821	xrcc6	100	81.148	ENSATEG00000007119	xrcc6	100	81.148	Anabas_testudineus
ENSHCOG00000009821	xrcc6	89	58.608	ENSAPLG00000004469	XRCC6	98	58.608	Anas_platyrhynchos
ENSHCOG00000009821	xrcc6	99	47.769	ENSANAG00000020017	-	89	58.291	Aotus_nancymaae
ENSHCOG00000009821	xrcc6	99	47.697	ENSANAG00000035230	-	99	47.697	Aotus_nancymaae
ENSHCOG00000009821	xrcc6	99	53.783	ENSANAG00000018684	XRCC6	93	60.094	Aotus_nancymaae
ENSHCOG00000009821	xrcc6	99	45.813	ENSANAG00000023445	-	99	45.649	Aotus_nancymaae
ENSHCOG00000009821	xrcc6	100	80.164	ENSACLG00000018608	xrcc6	100	80.164	Astatotilapia_calliptera
ENSHCOG00000009821	xrcc6	99	73.727	ENSAMXG00000007545	xrcc6	100	73.727	Astyanax_mexicanus
ENSHCOG00000009821	xrcc6	99	53.783	ENSCJAG00000045512	XRCC6	99	53.618	Callithrix_jacchus
ENSHCOG00000009821	xrcc6	99	52.796	ENSTSYG00000011348	XRCC6	99	52.961	Carlito_syrichta
ENSHCOG00000009821	xrcc6	99	50.984	ENSCCAG00000030041	-	94	50.822	Cebus_capucinus
ENSHCOG00000009821	xrcc6	99	44.132	ENSCCAG00000037663	-	96	44.132	Cebus_capucinus
ENSHCOG00000009821	xrcc6	92	53.629	ENSCCAG00000030468	-	99	54.839	Cebus_capucinus
ENSHCOG00000009821	xrcc6	99	43.493	ENSCCAG00000035711	-	99	43.328	Cebus_capucinus
ENSHCOG00000009821	xrcc6	99	53.947	ENSCATG00000042366	XRCC6	99	53.618	Cercocebus_atys
ENSHCOG00000009821	xrcc6	99	54.201	ENSCLAG00000016669	XRCC6	99	54.036	Chinchilla_lanigera
ENSHCOG00000009821	xrcc6	99	53.947	ENSCSAG00000005784	XRCC6	99	53.618	Chlorocebus_sabaeus
ENSHCOG00000009821	xrcc6	99	55.974	ENSCPBG00000020535	XRCC6	99	55.810	Chrysemys_picta_bellii
ENSHCOG00000009821	xrcc6	99	33.496	ENSCING00000000633	-	95	33.959	Ciona_intestinalis
ENSHCOG00000009821	xrcc6	99	53.947	ENSCANG00000031032	XRCC6	99	53.618	Colobus_angolensis_palliatus
ENSHCOG00000009821	xrcc6	99	50.165	ENSCGRG00001019029	Xrcc6	99	50.165	Cricetulus_griseus_chok1gshd
ENSHCOG00000009821	xrcc6	99	54.125	ENSCGRG00000001528	Xrcc6	99	54.125	Cricetulus_griseus_crigri
ENSHCOG00000009821	xrcc6	100	74.262	ENSCSEG00000020434	xrcc6	100	74.262	Cynoglossus_semilaevis
ENSHCOG00000009821	xrcc6	100	77.541	ENSCVAG00000002189	xrcc6	100	77.541	Cyprinodon_variegatus
ENSHCOG00000009821	xrcc6	99	70.492	ENSDARG00000071551	xrcc6	99	70.328	Danio_rerio
ENSHCOG00000009821	xrcc6	67	52.439	ENSETEG00000015333	-	77	52.439	Echinops_telfairi
ENSHCOG00000009821	xrcc6	99	53.377	ENSEASG00005001514	XRCC6	99	53.377	Equus_asinus_asinus
ENSHCOG00000009821	xrcc6	99	53.542	ENSECAG00000017563	XRCC6	99	54.189	Equus_caballus
ENSHCOG00000009821	xrcc6	100	70.492	ENSELUG00000020301	xrcc6	100	70.492	Esox_lucius
ENSHCOG00000009821	xrcc6	99	56.699	ENSFALG00000011908	XRCC6	96	56.536	Ficedula_albicollis
ENSHCOG00000009821	xrcc6	100	78.852	ENSFHEG00000016833	xrcc6	100	78.852	Fundulus_heteroclitus
ENSHCOG00000009821	xrcc6	99	63.622	ENSGMOG00000013524	xrcc6	100	63.295	Gadus_morhua
ENSHCOG00000009821	xrcc6	96	65.000	ENSGALG00000011932	XRCC6	90	66.667	Gallus_gallus
ENSHCOG00000009821	xrcc6	100	76.066	ENSGAFG00000008130	xrcc6	100	76.066	Gambusia_affinis
ENSHCOG00000009821	xrcc6	99	77.687	ENSGACG00000004868	xrcc6	99	77.524	Gasterosteus_aculeatus
ENSHCOG00000009821	xrcc6	99	55.974	ENSGAGG00000017518	XRCC6	99	55.810	Gopherus_agassizii
ENSHCOG00000009821	xrcc6	99	53.947	ENSGGOG00000015885	XRCC6	94	60.268	Gorilla_gorilla
ENSHCOG00000009821	xrcc6	93	81.272	ENSHBUG00000023281	xrcc6	100	81.272	Haplochromis_burtoni
ENSHCOG00000009821	xrcc6	99	53.115	ENSHGLG00000018078	XRCC6	99	53.465	Heterocephalus_glaber_female
ENSHCOG00000009821	xrcc6	99	53.115	ENSHGLG00100011264	XRCC6	99	53.465	Heterocephalus_glaber_male
ENSHCOG00000009821	xrcc6	99	71.429	ENSIPUG00000000767	xrcc6	99	71.429	Ictalurus_punctatus
ENSHCOG00000009821	xrcc6	99	53.947	ENSSTOG00000009490	XRCC6	99	53.783	Ictidomys_tridecemlineatus
ENSHCOG00000009821	xrcc6	99	50.000	ENSJJAG00000017136	Xrcc6	99	50.658	Jaculus_jaculus
ENSHCOG00000009821	xrcc6	99	80.131	ENSKMAG00000002141	xrcc6	99	80.131	Kryptolebias_marmoratus
ENSHCOG00000009821	xrcc6	99	80.131	ENSLBEG00000002691	xrcc6	99	80.131	Labrus_bergylta
ENSHCOG00000009821	xrcc6	83	68.687	ENSLOCG00000011533	xrcc6	99	68.687	Lepisosteus_oculatus
ENSHCOG00000009821	xrcc6	99	53.947	ENSMFAG00000003352	XRCC6	94	59.716	Macaca_fascicularis
ENSHCOG00000009821	xrcc6	99	53.947	ENSMMUG00000001856	XRCC6	99	53.618	Macaca_mulatta
ENSHCOG00000009821	xrcc6	99	53.947	ENSMNEG00000035076	XRCC6	99	53.618	Macaca_nemestrina
ENSHCOG00000009821	xrcc6	99	53.947	ENSMLEG00000019869	XRCC6	99	53.618	Mandrillus_leucophaeus
ENSHCOG00000009821	xrcc6	100	77.741	ENSMAMG00000003368	xrcc6	100	77.741	Mastacembelus_armatus
ENSHCOG00000009821	xrcc6	96	78.024	ENSMAMG00000003405	xrcc6	97	77.986	Mastacembelus_armatus
ENSHCOG00000009821	xrcc6	100	80.000	ENSMZEG00005028080	xrcc6	100	80.000	Maylandia_zebra
ENSHCOG00000009821	xrcc6	99	55.645	ENSMGAG00000012146	XRCC6	99	56.169	Meleagris_gallopavo
ENSHCOG00000009821	xrcc6	99	53.884	ENSMAUG00000017340	Xrcc6	99	53.884	Mesocricetus_auratus
ENSHCOG00000009821	xrcc6	99	52.623	ENSMOCG00000015717	Xrcc6	99	52.970	Microtus_ochrogaster
ENSHCOG00000009821	xrcc6	99	79.008	ENSMMOG00000003536	xrcc6	99	78.843	Mola_mola
ENSHCOG00000009821	xrcc6	100	79.344	ENSMALG00000013912	xrcc6	95	79.344	Monopterus_albus
ENSHCOG00000009821	xrcc6	99	49.837	MGP_CAROLIEiJ_G0020067	Xrcc6	99	49.754	Mus_caroli
ENSHCOG00000009821	xrcc6	99	53.344	ENSMUSG00000022471	Xrcc6	99	58.015	Mus_musculus
ENSHCOG00000009821	xrcc6	99	53.670	MGP_PahariEiJ_G0020069	Xrcc6	99	54.023	Mus_pahari
ENSHCOG00000009821	xrcc6	96	54.031	MGP_SPRETEiJ_G0020967	Xrcc6	99	54.031	Mus_spretus
ENSHCOG00000009821	xrcc6	99	53.884	ENSNGAG00000013750	Xrcc6	99	53.884	Nannospalax_galili
ENSHCOG00000009821	xrcc6	100	79.836	ENSNBRG00000004125	xrcc6	100	79.836	Neolamprologus_brichardi
ENSHCOG00000009821	xrcc6	95	55.345	ENSOPRG00000002386	XRCC6	99	55.345	Ochotona_princeps
ENSHCOG00000009821	xrcc6	99	53.770	ENSODEG00000015847	XRCC6	99	53.607	Octodon_degus
ENSHCOG00000009821	xrcc6	99	80.263	ENSONIG00000019715	xrcc6	99	80.263	Oreochromis_niloticus
ENSHCOG00000009821	xrcc6	68	58.495	ENSOANG00000011328	XRCC6	99	58.495	Ornithorhynchus_anatinus
ENSHCOG00000009821	xrcc6	95	54.922	ENSOCUG00000006948	XRCC6	99	54.201	Oryctolagus_cuniculus
ENSHCOG00000009821	xrcc6	100	76.596	ENSORLG00020007820	xrcc6	100	76.596	Oryzias_latipes_hni
ENSHCOG00000009821	xrcc6	100	76.268	ENSORLG00015006406	xrcc6	100	76.268	Oryzias_latipes_hsok
ENSHCOG00000009821	xrcc6	100	77.578	ENSOMEG00000008998	xrcc6	100	77.578	Oryzias_melastigma
ENSHCOG00000009821	xrcc6	99	53.871	ENSOGAG00000008821	XRCC6	99	53.707	Otolemur_garnettii
ENSHCOG00000009821	xrcc6	91	56.593	ENSPPAG00000037167	XRCC6	99	56.593	Pan_paniscus
ENSHCOG00000009821	xrcc6	99	53.947	ENSPTRG00000045824	XRCC6	99	53.618	Pan_troglodytes
ENSHCOG00000009821	xrcc6	99	53.947	ENSPTRG00000022548	XRCC6	99	53.618	Pan_troglodytes
ENSHCOG00000009821	xrcc6	99	53.783	ENSPANG00000001252	XRCC6	97	60.526	Papio_anubis
ENSHCOG00000009821	xrcc6	99	67.652	ENSPKIG00000003974	xrcc6	99	67.652	Paramormyrops_kingsleyae
ENSHCOG00000009821	xrcc6	99	76.872	ENSPMGG00000014220	xrcc6	100	77.205	Periophthalmus_magnuspinnatus
ENSHCOG00000009821	xrcc6	99	52.459	ENSPEMG00000023446	Xrcc6	99	52.805	Peromyscus_maniculatus_bairdii
ENSHCOG00000009821	xrcc6	99	55.116	ENSPCIG00000026409	XRCC6	99	55.281	Phascolarctos_cinereus
ENSHCOG00000009821	xrcc6	100	78.033	ENSPFOG00000017173	xrcc6	100	78.033	Poecilia_formosa
ENSHCOG00000009821	xrcc6	100	77.541	ENSPLAG00000000562	xrcc6	100	77.541	Poecilia_latipinna
ENSHCOG00000009821	xrcc6	100	77.869	ENSPMEG00000018478	xrcc6	100	77.869	Poecilia_mexicana
ENSHCOG00000009821	xrcc6	100	77.941	ENSPREG00000020957	xrcc6	93	77.941	Poecilia_reticulata
ENSHCOG00000009821	xrcc6	99	47.697	ENSPPYG00000011876	XRCC6	99	47.368	Pongo_abelii
ENSHCOG00000009821	xrcc6	99	52.231	ENSPVAG00000001168	XRCC6	99	52.231	Pteropus_vampyrus
ENSHCOG00000009821	xrcc6	100	79.836	ENSPNYG00000003815	xrcc6	100	75.975	Pundamilia_nyererei
ENSHCOG00000009821	xrcc6	99	54.050	ENSRNOG00000006392	Xrcc6	99	54.050	Rattus_norvegicus
ENSHCOG00000009821	xrcc6	99	50.658	ENSRBIG00000039794	XRCC6	99	50.329	Rhinopithecus_bieti
ENSHCOG00000009821	xrcc6	99	53.947	ENSRROG00000030297	XRCC6	96	58.636	Rhinopithecus_roxellana
ENSHCOG00000009821	xrcc6	67	50.617	ENSSBOG00000024724	-	99	50.617	Saimiri_boliviensis_boliviensis
ENSHCOG00000009821	xrcc6	99	54.112	ENSSHAG00000010790	XRCC6	99	54.605	Sarcophilus_harrisii
ENSHCOG00000009821	xrcc6	99	70.115	ENSSFOG00015014409	xrcc6	99	70.115	Scleropages_formosus
ENSHCOG00000009821	xrcc6	100	81.475	ENSSMAG00000006496	xrcc6	100	81.475	Scophthalmus_maximus
ENSHCOG00000009821	xrcc6	100	80.820	ENSSDUG00000007542	xrcc6	100	80.820	Seriola_dumerili
ENSHCOG00000009821	xrcc6	100	80.492	ENSSLDG00000009974	xrcc6	100	80.492	Seriola_lalandi_dorsalis
ENSHCOG00000009821	xrcc6	99	55.082	ENSSPUG00000012086	XRCC6	99	55.082	Sphenodon_punctatus
ENSHCOG00000009821	xrcc6	100	80.820	ENSSPAG00000015199	xrcc6	100	80.820	Stegastes_partitus
ENSHCOG00000009821	xrcc6	95	57.804	ENSTGUG00000009852	-	99	56.373	Taeniopygia_guttata
ENSHCOG00000009821	xrcc6	99	73.892	ENSTRUG00000017070	xrcc6	99	73.892	Takifugu_rubripes
ENSHCOG00000009821	xrcc6	96	73.773	ENSTNIG00000012947	xrcc6	99	73.773	Tetraodon_nigroviridis
ENSHCOG00000009821	xrcc6	95	50.690	ENSTBEG00000011736	XRCC6	99	50.690	Tupaia_belangeri
ENSHCOG00000009821	xrcc6	99	44.262	ENSTTRG00000006749	XRCC6	99	44.426	Tursiops_truncatus
ENSHCOG00000009821	xrcc6	100	77.869	ENSXMAG00000009691	xrcc6	100	77.869	Xiphophorus_maculatus