EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000009930 (Gene tree)
Gene ID: -
Gene Symbol: nsrp1
Alias: ccdc55|fc14d05|wu:fc14d05|zgc:152777
Full Name: nuclear speckle splicing regulatory protein 1
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 6818 bases
Position: chrKV880451.1:8130314-8137131
Accession: 109531960
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000007818	DUF2040	PF09745.9	7.9e-37	1	1
ENSHCOP00000007829	DUF2040	PF09745.9	8.3e-37	1	1
ENSHCOP00000022327	DUF2040	PF09745.9	8.3e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000001348	-	2032	-	ENSHCOP00000007829	385 (aa)	-	-
ENSHCOT00000001341	-	2114	-	ENSHCOP00000022327	385 (aa)	-	-
ENSHCOT00000001357	-	1418	XM_019896497	ENSHCOP00000007818	377 (aa)	XP_019752056	-

Gene Model

Click here to download ENSHCOG00000009930's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000009930's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000009930	nsrp1	65	65.829	ENSG00000126653	NSRP1	100	62.500	Homo_sapiens
ENSHCOG00000009930	nsrp1	96	72.862	ENSAPOG00000019041	nsrp1	90	67.752	Acanthochromis_polyacanthus
ENSHCOG00000009930	nsrp1	82	71.795	ENSACIG00000014008	nsrp1	80	64.856	Amphilophus_citrinellus
ENSHCOG00000009930	nsrp1	96	57.031	ENSAOCG00000011727	nsrp1	100	58.839	Amphiprion_ocellaris
ENSHCOG00000009930	nsrp1	76	75.676	ENSAPEG00000018767	nsrp1	87	67.323	Amphiprion_percula
ENSHCOG00000009930	nsrp1	79	73.684	ENSATEG00000006815	nsrp1	88	65.132	Anabas_testudineus
ENSHCOG00000009930	nsrp1	61	68.063	ENSAPLG00000011228	NSRP1	58	68.063	Anas_platyrhynchos
ENSHCOG00000009930	nsrp1	96	71.642	ENSACLG00000005604	nsrp1	93	66.355	Astatotilapia_calliptera
ENSHCOG00000009930	nsrp1	93	60.370	ENSAMXG00000038882	nsrp1	88	57.994	Astyanax_mexicanus
ENSHCOG00000009930	nsrp1	76	51.759	ENSCATG00000031727	-	71	51.759	Cercocebus_atys
ENSHCOG00000009930	nsrp1	51	53.769	ENSCSAVG00000011750	-	98	53.234	Ciona_savignyi
ENSHCOG00000009930	nsrp1	86	66.667	ENSCGRG00000010270	Nsrp1	67	66.667	Cricetulus_griseus_crigri
ENSHCOG00000009930	nsrp1	81	69.767	ENSCSEG00000018083	nsrp1	69	69.767	Cynoglossus_semilaevis
ENSHCOG00000009930	nsrp1	95	53.968	ENSCVAG00000021345	nsrp1	96	53.636	Cyprinodon_variegatus
ENSHCOG00000009930	nsrp1	96	57.667	ENSDARG00000015221	nsrp1	79	55.280	Danio_rerio
ENSHCOG00000009930	nsrp1	50	42.574	FBgn0030474	CG15747	51	42.574	Drosophila_melanogaster
ENSHCOG00000009930	nsrp1	87	65.185	ENSELUG00000005731	nsrp1	71	60.436	Esox_lucius
ENSHCOG00000009930	nsrp1	61	69.231	ENSFALG00000006216	NSRP1	54	65.969	Ficedula_albicollis
ENSHCOG00000009930	nsrp1	79	72.973	ENSFHEG00000004525	nsrp1	100	50.936	Fundulus_heteroclitus
ENSHCOG00000009930	nsrp1	90	65.306	ENSGMOG00000007152	nsrp1	99	50.337	Gadus_morhua
ENSHCOG00000009930	nsrp1	80	73.684	ENSGAFG00000000710	nsrp1	100	52.830	Gambusia_affinis
ENSHCOG00000009930	nsrp1	94	58.385	ENSGACG00000020516	nsrp1	89	55.714	Gasterosteus_aculeatus
ENSHCOG00000009930	nsrp1	63	71.795	ENSGAGG00000011536	NSRP1	60	71.795	Gopherus_agassizii
ENSHCOG00000009930	nsrp1	98	68.613	ENSHBUG00000021510	nsrp1	91	65.397	Haplochromis_burtoni
ENSHCOG00000009930	nsrp1	79	73.684	ENSIPUG00000019291	nsrp1	80	73.684	Ictalurus_punctatus
ENSHCOG00000009930	nsrp1	81	68.841	ENSKMAG00000019403	nsrp1	77	65.359	Kryptolebias_marmoratus
ENSHCOG00000009930	nsrp1	95	66.412	ENSLBEG00000027763	nsrp1	100	50.989	Labrus_bergylta
ENSHCOG00000009930	nsrp1	84	56.398	ENSLOCG00000006654	nsrp1	100	41.685	Lepisosteus_oculatus
ENSHCOG00000009930	nsrp1	86	45.833	ENSLAFG00000013731	NSRP1	100	45.833	Loxodonta_africana
ENSHCOG00000009930	nsrp1	76	52.261	ENSMFAG00000038296	-	59	52.261	Macaca_fascicularis
ENSHCOG00000009930	nsrp1	88	65.646	ENSMAMG00000020195	nsrp1	87	64.590	Mastacembelus_armatus
ENSHCOG00000009930	nsrp1	96	71.642	ENSMZEG00005024743	nsrp1	93	66.044	Maylandia_zebra
ENSHCOG00000009930	nsrp1	73	64.615	ENSMOCG00000019716	Nsrp1	57	64.615	Microtus_ochrogaster
ENSHCOG00000009930	nsrp1	94	57.823	ENSMMOG00000010908	nsrp1	98	47.808	Mola_mola
ENSHCOG00000009930	nsrp1	72	64.322	ENSMODG00000009868	NSRP1	51	64.322	Monodelphis_domestica
ENSHCOG00000009930	nsrp1	91	70.588	ENSMALG00000018409	nsrp1	79	66.221	Monopterus_albus
ENSHCOG00000009930	nsrp1	67	65.517	MGP_CAROLIEiJ_G0016769	Nsrp1	96	64.198	Mus_caroli
ENSHCOG00000009930	nsrp1	67	67.000	ENSMUSG00000037958	Nsrp1	96	66.667	Mus_musculus
ENSHCOG00000009930	nsrp1	66	65.500	MGP_PahariEiJ_G0017906	Nsrp1	96	64.103	Mus_pahari
ENSHCOG00000009930	nsrp1	52	66.500	MGP_SPRETEiJ_G0017612	-	96	66.667	Mus_spretus
ENSHCOG00000009930	nsrp1	56	75.472	ENSNBRG00000009326	nsrp1	70	75.587	Neolamprologus_brichardi
ENSHCOG00000009930	nsrp1	96	53.863	ENSONIG00000005565	nsrp1	100	55.066	Oreochromis_niloticus
ENSHCOG00000009930	nsrp1	84	72.222	ENSORLG00000003135	nsrp1	100	53.611	Oryzias_latipes
ENSHCOG00000009930	nsrp1	79	72.222	ENSORLG00020016065	nsrp1	79	64.583	Oryzias_latipes_hni
ENSHCOG00000009930	nsrp1	79	72.222	ENSORLG00015020804	nsrp1	96	65.605	Oryzias_latipes_hsok
ENSHCOG00000009930	nsrp1	80	67.500	ENSPKIG00000000088	nsrp1	100	46.352	Paramormyrops_kingsleyae
ENSHCOG00000009930	nsrp1	60	71.795	ENSPSIG00000008905	NSRP1	57	65.775	Pelodiscus_sinensis
ENSHCOG00000009930	nsrp1	89	65.000	ENSPMGG00000021712	nsrp1	71	67.925	Periophthalmus_magnuspinnatus
ENSHCOG00000009930	nsrp1	96	70.221	ENSPFOG00000011548	nsrp1	100	52.201	Poecilia_formosa
ENSHCOG00000009930	nsrp1	80	73.684	ENSPLAG00000005053	nsrp1	92	64.873	Poecilia_latipinna
ENSHCOG00000009930	nsrp1	96	70.221	ENSPMEG00000013288	nsrp1	100	52.321	Poecilia_mexicana
ENSHCOG00000009930	nsrp1	80	73.684	ENSPREG00000009861	nsrp1	100	52.411	Poecilia_reticulata
ENSHCOG00000009930	nsrp1	96	55.732	ENSPNYG00000024136	nsrp1	92	53.134	Pundamilia_nyererei
ENSHCOG00000009930	nsrp1	96	61.210	ENSPNAG00000013616	nsrp1	89	59.190	Pygocentrus_nattereri
ENSHCOG00000009930	nsrp1	57	67.606	ENSSHAG00000003513	-	52	67.606	Sarcophilus_harrisii
ENSHCOG00000009930	nsrp1	81	67.500	ENSSFOG00015004371	nsrp1	91	57.143	Scleropages_formosus
ENSHCOG00000009930	nsrp1	85	68.773	ENSSMAG00000019880	nsrp1	88	64.262	Scophthalmus_maximus
ENSHCOG00000009930	nsrp1	77	75.000	ENSSDUG00000016675	nsrp1	86	66.885	Seriola_dumerili
ENSHCOG00000009930	nsrp1	77	75.000	ENSSLDG00000014686	nsrp1	86	66.557	Seriola_lalandi_dorsalis
ENSHCOG00000009930	nsrp1	89	59.912	ENSSPUG00000004538	NSRP1	54	59.912	Sphenodon_punctatus
ENSHCOG00000009930	nsrp1	96	72.491	ENSSPAG00000002693	nsrp1	90	68.730	Stegastes_partitus
ENSHCOG00000009930	nsrp1	77	65.152	ENSTGUG00000006486	NSRP1	60	65.152	Taeniopygia_guttata
ENSHCOG00000009930	nsrp1	96	70.632	ENSTRUG00000000226	nsrp1	91	67.774	Takifugu_rubripes
ENSHCOG00000009930	nsrp1	93	61.773	ENSTNIG00000016161	nsrp1	100	61.773	Tetraodon_nigroviridis
ENSHCOG00000009930	nsrp1	96	70.438	ENSXMAG00000029464	nsrp1	100	52.421	Xiphophorus_maculatus