EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000009952 (Gene tree)
Gene ID: 109521594
Gene Symbol: mbd1b
Alias: mbd1|wu:fi45g12
Full Name: methyl-CpG binding domain protein 1
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 8100 bases
Position: chrKV880111.1:2578325-2586424
Accession: 109521594
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000022344	MBD	PF01429.19	3.5e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000001300	-	3700	XM_019879524	ENSHCOP00000022344	778 (aa)	XP_019735083	UPI00094E2C1B

Gene Model

Click here to download ENSHCOG00000009952's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000009952's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000009952	mbd1b	99	54.976	ENSAPOG00000012810	mbd1b	99	55.704	Acanthochromis_polyacanthus
ENSHCOG00000009952	mbd1b	89	69.737	ENSACIG00000010590	mbd1b	85	69.737	Amphilophus_citrinellus
ENSHCOG00000009952	mbd1b	99	56.463	ENSAOCG00000020272	mbd1b	99	56.585	Amphiprion_ocellaris
ENSHCOG00000009952	mbd1b	99	56.250	ENSAPEG00000023230	mbd1b	99	56.373	Amphiprion_percula
ENSHCOG00000009952	mbd1b	99	57.927	ENSATEG00000009608	mbd1b	98	57.875	Anabas_testudineus
ENSHCOG00000009952	mbd1b	99	55.781	ENSACLG00000021383	mbd1b	99	55.662	Astatotilapia_calliptera
ENSHCOG00000009952	mbd1b	51	33.333	ENSCPOG00000001671	MBD1	67	32.941	Cavia_porcellus
ENSHCOG00000009952	mbd1b	53	33.094	ENSCATG00000029959	MBD1	70	35.577	Cercocebus_atys
ENSHCOG00000009952	mbd1b	51	36.667	ENSCLAG00000007457	MBD1	54	53.846	Chinchilla_lanigera
ENSHCOG00000009952	mbd1b	91	56.642	ENSCSEG00000009082	mbd1b	96	51.541	Cynoglossus_semilaevis
ENSHCOG00000009952	mbd1b	99	53.014	ENSCVAG00000001167	mbd1b	98	53.014	Cyprinodon_variegatus
ENSHCOG00000009952	mbd1b	92	33.871	ENSDARG00000025699	mbd1b	83	33.134	Danio_rerio
ENSHCOG00000009952	mbd1b	53	30.824	ENSEASG00005003857	MBD1	67	30.626	Equus_asinus_asinus
ENSHCOG00000009952	mbd1b	79	55.128	ENSELUG00000004375	mbd1b	76	55.128	Esox_lucius
ENSHCOG00000009952	mbd1b	52	34.404	ENSFCAG00000015730	MBD1	67	35.784	Felis_catus
ENSHCOG00000009952	mbd1b	92	55.749	ENSFHEG00000020120	mbd1b	91	56.150	Fundulus_heteroclitus
ENSHCOG00000009952	mbd1b	92	54.161	ENSGAFG00000008975	mbd1b	91	55.140	Gambusia_affinis
ENSHCOG00000009952	mbd1b	81	47.313	ENSGACG00000012106	-	100	47.218	Gasterosteus_aculeatus
ENSHCOG00000009952	mbd1b	99	56.138	ENSHBUG00000014270	mbd1b	99	55.542	Haplochromis_burtoni
ENSHCOG00000009952	mbd1b	96	35.468	ENSIPUG00000015243	-	99	34.462	Ictalurus_punctatus
ENSHCOG00000009952	mbd1b	99	53.913	ENSKMAG00000020760	mbd1b	98	54.410	Kryptolebias_marmoratus
ENSHCOG00000009952	mbd1b	53	36.667	ENSMFAG00000026335	MBD1	70	36.058	Macaca_fascicularis
ENSHCOG00000009952	mbd1b	53	36.667	ENSMMUG00000009050	MBD1	70	36.058	Macaca_mulatta
ENSHCOG00000009952	mbd1b	53	36.667	ENSMNEG00000038822	MBD1	70	36.058	Macaca_nemestrina
ENSHCOG00000009952	mbd1b	53	33.094	ENSMLEG00000043121	MBD1	70	35.577	Mandrillus_leucophaeus
ENSHCOG00000009952	mbd1b	67	59.672	ENSMAMG00000023341	-	98	51.537	Mastacembelus_armatus
ENSHCOG00000009952	mbd1b	99	55.900	ENSMZEG00005010421	mbd1b	99	55.781	Maylandia_zebra
ENSHCOG00000009952	mbd1b	97	54.942	ENSMMOG00000011607	mbd1b	63	97.959	Mola_mola
ENSHCOG00000009952	mbd1b	98	57.934	ENSMALG00000007808	mbd1b	98	57.565	Monopterus_albus
ENSHCOG00000009952	mbd1b	99	55.781	ENSONIG00000020289	mbd1b	99	56.138	Oreochromis_niloticus
ENSHCOG00000009952	mbd1b	99	53.995	ENSORLG00000029390	mbd1b	98	53.567	Oryzias_latipes
ENSHCOG00000009952	mbd1b	99	54.272	ENSORLG00020000575	mbd1b	98	53.809	Oryzias_latipes_hni
ENSHCOG00000009952	mbd1b	99	54.207	ENSORLG00015014812	mbd1b	98	53.661	Oryzias_latipes_hsok
ENSHCOG00000009952	mbd1b	99	52.544	ENSOMEG00000023660	mbd1b	98	53.516	Oryzias_melastigma
ENSHCOG00000009952	mbd1b	52	34.404	ENSPPRG00000021387	MBD1	72	32.727	Panthera_pardus
ENSHCOG00000009952	mbd1b	52	34.404	ENSPTIG00000021231	MBD1	67	35.784	Panthera_tigris_altaica
ENSHCOG00000009952	mbd1b	53	33.094	ENSPANG00000010867	MBD1	70	35.577	Papio_anubis
ENSHCOG00000009952	mbd1b	69	36.923	ENSPCIG00000027937	-	75	36.923	Phascolarctos_cinereus
ENSHCOG00000009952	mbd1b	92	54.570	ENSPFOG00000007511	mbd1b	94	60.284	Poecilia_formosa
ENSHCOG00000009952	mbd1b	92	54.843	ENSPLAG00000021258	mbd1b	91	55.214	Poecilia_latipinna
ENSHCOG00000009952	mbd1b	92	54.707	ENSPMEG00000024145	mbd1b	91	55.214	Poecilia_mexicana
ENSHCOG00000009952	mbd1b	92	55.389	ENSPREG00000021805	mbd1b	91	55.823	Poecilia_reticulata
ENSHCOG00000009952	mbd1b	94	37.439	ENSPNAG00000018075	mbd1b	83	39.487	Pygocentrus_nattereri
ENSHCOG00000009952	mbd1b	92	36.005	ENSSFOG00015008591	-	61	48.408	Scleropages_formosus
ENSHCOG00000009952	mbd1b	92	59.264	ENSSMAG00000014640	mbd1b	81	59.001	Scophthalmus_maximus
ENSHCOG00000009952	mbd1b	92	59.868	ENSSDUG00000012996	mbd1b	90	57.869	Seriola_dumerili
ENSHCOG00000009952	mbd1b	76	55.102	ENSSLDG00000012422	mbd1b	87	53.030	Seriola_lalandi_dorsalis
ENSHCOG00000009952	mbd1b	93	60.921	ENSSPAG00000021447	mbd1b	99	58.809	Stegastes_partitus
ENSHCOG00000009952	mbd1b	97	51.285	ENSTRUG00000013422	mbd1b	96	52.399	Takifugu_rubripes
ENSHCOG00000009952	mbd1b	64	55.814	ENSTNIG00000007326	-	73	54.264	Tetraodon_nigroviridis
ENSHCOG00000009952	mbd1b	52	32.850	ENSUAMG00000004752	MBD1	52	52.308	Ursus_americanus
ENSHCOG00000009952	mbd1b	92	54.817	ENSXMAG00000005628	mbd1b	90	54.886	Xiphophorus_maculatus