EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000010119 (Gene tree)
Gene ID: 109516798
Gene Symbol: pum2
Alias: si:ch1073-351m12.1
Full Name: pumilio homolog 2-like
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 15625 bases
Position: chrKV879962.1:359928-375552
Accession: 109516798
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000022427	PUF	PF00806.19	1.3e-69	1	7
ENSHCOP00000022427	PUF	PF00806.19	1.3e-69	2	7
ENSHCOP00000022427	PUF	PF00806.19	1.3e-69	3	7
ENSHCOP00000022427	PUF	PF00806.19	1.3e-69	4	7
ENSHCOP00000022427	PUF	PF00806.19	1.3e-69	5	7
ENSHCOP00000022427	PUF	PF00806.19	1.3e-69	6	7
ENSHCOP00000022427	PUF	PF00806.19	1.3e-69	7	7
ENSHCOP00000007967	PUF	PF00806.19	7.5e-69	1	7
ENSHCOP00000007967	PUF	PF00806.19	7.5e-69	2	7
ENSHCOP00000007967	PUF	PF00806.19	7.5e-69	3	7
ENSHCOP00000007967	PUF	PF00806.19	7.5e-69	4	7
ENSHCOP00000007967	PUF	PF00806.19	7.5e-69	5	7
ENSHCOP00000007967	PUF	PF00806.19	7.5e-69	6	7
ENSHCOP00000007967	PUF	PF00806.19	7.5e-69	7	7
ENSHCOP00000022432	PUF	PF00806.19	1.1e-67	1	7
ENSHCOP00000022432	PUF	PF00806.19	1.1e-67	2	7
ENSHCOP00000022432	PUF	PF00806.19	1.1e-67	3	7
ENSHCOP00000022432	PUF	PF00806.19	1.1e-67	4	7
ENSHCOP00000022432	PUF	PF00806.19	1.1e-67	5	7
ENSHCOP00000022432	PUF	PF00806.19	1.1e-67	6	7
ENSHCOP00000022432	PUF	PF00806.19	1.1e-67	7	7
ENSHCOP00000022430	PUF	PF00806.19	1.3e-67	1	7
ENSHCOP00000022430	PUF	PF00806.19	1.3e-67	2	7
ENSHCOP00000022430	PUF	PF00806.19	1.3e-67	3	7
ENSHCOP00000022430	PUF	PF00806.19	1.3e-67	4	7
ENSHCOP00000022430	PUF	PF00806.19	1.3e-67	5	7
ENSHCOP00000022430	PUF	PF00806.19	1.3e-67	6	7
ENSHCOP00000022430	PUF	PF00806.19	1.3e-67	7	7

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000001085	-	6236	-	ENSHCOP00000022430	1270 (aa)	-	-
ENSHCOT00000001116	-	3558	XM_019871586	ENSHCOP00000007967	1185 (aa)	XP_019727145	-
ENSHCOT00000001089	-	6164	-	ENSHCOP00000022427	1246 (aa)	-	-
ENSHCOT00000001074	-	4294	XM_019871582	ENSHCOP00000022432	1232 (aa)	XP_019727141	UPI00094EFC86

Gene Model

Click here to download ENSHCOG00000010119's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000010119's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000010119	pum2	56	72.137	ENSHCOG00000005149	pum1	100	62.833

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000010119	pum2	90	76.710	ENSG00000055917	PUM2	99	91.443	Homo_sapiens
ENSHCOG00000010119	pum2	90	76.248	ENSAMEG00000002823	PUM2	100	75.533	Ailuropoda_melanoleuca
ENSHCOG00000010119	pum2	90	98.739	ENSACIG00000010646	pum2	96	98.739	Amphilophus_citrinellus
ENSHCOG00000010119	pum2	99	93.103	ENSAOCG00000016619	pum2	99	92.377	Amphiprion_ocellaris
ENSHCOG00000010119	pum2	100	94.874	ENSAPEG00000019924	pum2	100	94.202	Amphiprion_percula
ENSHCOG00000010119	pum2	100	93.277	ENSATEG00000015030	pum2	100	92.689	Anabas_testudineus
ENSHCOG00000010119	pum2	100	73.610	ENSAPLG00000010496	PUM2	100	73.311	Anas_platyrhynchos
ENSHCOG00000010119	pum2	90	76.340	ENSACAG00000010491	PUM2	100	74.630	Anolis_carolinensis
ENSHCOG00000010119	pum2	85	85.965	ENSANAG00000021807	PUM2	99	91.443	Aotus_nancymaae
ENSHCOG00000010119	pum2	100	92.365	ENSACLG00000022532	pum2	100	92.276	Astatotilapia_calliptera
ENSHCOG00000010119	pum2	81	91.748	ENSBTAG00000011155	PUM2	99	91.687	Bos_taurus
ENSHCOG00000010119	pum2	85	85.965	ENSCJAG00000007450	PUM2	99	91.443	Callithrix_jacchus
ENSHCOG00000010119	pum2	90	75.970	ENSCAFG00000003839	PUM2	100	75.348	Canis_familiaris
ENSHCOG00000010119	pum2	81	91.505	ENSCAFG00020025689	PUM2	99	91.443	Canis_lupus_dingo
ENSHCOG00000010119	pum2	81	91.748	ENSCHIG00000022180	PUM2	99	91.687	Capra_hircus
ENSHCOG00000010119	pum2	84	85.746	ENSTSYG00000014463	PUM2	99	91.443	Carlito_syrichta
ENSHCOG00000010119	pum2	89	88.353	ENSCAPG00000016888	PUM2	99	85.987	Cavia_aperea
ENSHCOG00000010119	pum2	85	85.965	ENSCPOG00000031996	PUM2	99	91.443	Cavia_porcellus
ENSHCOG00000010119	pum2	90	76.710	ENSCCAG00000037035	PUM2	99	91.443	Cebus_capucinus
ENSHCOG00000010119	pum2	90	76.802	ENSCATG00000043826	PUM2	99	91.443	Cercocebus_atys
ENSHCOG00000010119	pum2	90	76.802	ENSCLAG00000006048	PUM2	99	91.443	Chinchilla_lanigera
ENSHCOG00000010119	pum2	90	76.802	ENSCSAG00000008087	PUM2	100	75.416	Chlorocebus_sabaeus
ENSHCOG00000010119	pum2	64	75.231	ENSCHOG00000004575	PUM2	79	75.000	Choloepus_hoffmanni
ENSHCOG00000010119	pum2	88	90.954	ENSCPBG00000019966	PUM2	99	90.954	Chrysemys_picta_bellii
ENSHCOG00000010119	pum2	90	76.895	ENSCANG00000032797	PUM2	99	91.443	Colobus_angolensis_palliatus
ENSHCOG00000010119	pum2	85	85.965	ENSCGRG00001025023	Pum2	99	91.443	Cricetulus_griseus_chok1gshd
ENSHCOG00000010119	pum2	85	85.965	ENSCGRG00000001580	Pum2	99	91.443	Cricetulus_griseus_crigri
ENSHCOG00000010119	pum2	100	98.630	ENSCSEG00000020899	pum2	99	98.621	Cynoglossus_semilaevis
ENSHCOG00000010119	pum2	100	92.521	ENSCVAG00000002426	pum2	100	90.833	Cyprinodon_variegatus
ENSHCOG00000010119	pum2	100	86.181	ENSDARG00000061040	pum2	100	85.427	Danio_rerio
ENSHCOG00000010119	pum2	75	92.825	ENSDNOG00000006733	PUM2	99	92.727	Dasypus_novemcinctus
ENSHCOG00000010119	pum2	90	72.089	ENSDORG00000011453	Pum2	100	71.072	Dipodomys_ordii
ENSHCOG00000010119	pum2	78	90.747	ENSETEG00000017683	PUM2	79	90.747	Echinops_telfairi
ENSHCOG00000010119	pum2	85	60.078	ENSEBUG00000004435	pum2	96	58.496	Eptatretus_burgeri
ENSHCOG00000010119	pum2	63	60.648	ENSEBUG00000014828	pum2	92	59.649	Eptatretus_burgeri
ENSHCOG00000010119	pum2	81	91.505	ENSEASG00005009429	PUM2	99	91.443	Equus_asinus_asinus
ENSHCOG00000010119	pum2	81	91.505	ENSECAG00000021930	PUM2	99	91.443	Equus_caballus
ENSHCOG00000010119	pum2	69	67.925	ENSEEUG00000003224	-	74	67.925	Erinaceus_europaeus
ENSHCOG00000010119	pum2	100	87.917	ENSELUG00000014997	pum2	100	87.750	Esox_lucius
ENSHCOG00000010119	pum2	77	91.262	ENSFCAG00000027520	PUM2	99	91.198	Felis_catus
ENSHCOG00000010119	pum2	90	75.897	ENSFALG00000001759	PUM2	100	75.393	Ficedula_albicollis
ENSHCOG00000010119	pum2	90	75.693	ENSFDAG00000019685	PUM2	99	90.954	Fukomys_damarensis
ENSHCOG00000010119	pum2	100	89.435	ENSFHEG00000021596	pum2	100	89.517	Fundulus_heteroclitus
ENSHCOG00000010119	pum2	90	86.864	ENSGMOG00000006903	pum2	100	86.309	Gadus_morhua
ENSHCOG00000010119	pum2	77	90.954	ENSGALG00000016481	PUM2	92	90.954	Gallus_gallus
ENSHCOG00000010119	pum2	100	92.779	ENSGAFG00000013691	pum2	100	92.359	Gambusia_affinis
ENSHCOG00000010119	pum2	90	90.689	ENSGACG00000009670	pum2	100	90.317	Gasterosteus_aculeatus
ENSHCOG00000010119	pum2	100	73.870	ENSGAGG00000020698	PUM2	100	75.301	Gopherus_agassizii
ENSHCOG00000010119	pum2	90	76.710	ENSGGOG00000011374	PUM2	99	91.443	Gorilla_gorilla
ENSHCOG00000010119	pum2	100	94.515	ENSHBUG00000016453	pum2	100	85.487	Haplochromis_burtoni
ENSHCOG00000010119	pum2	85	85.088	ENSHGLG00000007892	PUM2	99	90.465	Heterocephalus_glaber_female
ENSHCOG00000010119	pum2	90	75.346	ENSHGLG00100015510	PUM2	100	73.961	Heterocephalus_glaber_male
ENSHCOG00000010119	pum2	85	85.965	ENSSTOG00000006262	PUM2	99	91.443	Ictidomys_tridecemlineatus
ENSHCOG00000010119	pum2	85	85.965	ENSJJAG00000020969	Pum2	99	91.443	Jaculus_jaculus
ENSHCOG00000010119	pum2	100	91.862	ENSKMAG00000017216	pum2	100	91.611	Kryptolebias_marmoratus
ENSHCOG00000010119	pum2	100	93.361	ENSLBEG00000020488	pum2	100	92.689	Labrus_bergylta
ENSHCOG00000010119	pum2	100	74.897	ENSLACG00000008723	PUM2	100	75.738	Latimeria_chalumnae
ENSHCOG00000010119	pum2	100	77.613	ENSLOCG00000017196	pum2	100	76.650	Lepisosteus_oculatus
ENSHCOG00000010119	pum2	90	75.970	ENSLAFG00000009278	PUM2	100	75.046	Loxodonta_africana
ENSHCOG00000010119	pum2	90	76.802	ENSMFAG00000000492	PUM2	99	91.443	Macaca_fascicularis
ENSHCOG00000010119	pum2	85	85.965	ENSMMUG00000023181	PUM2	99	91.443	Macaca_mulatta
ENSHCOG00000010119	pum2	85	85.965	ENSMNEG00000039659	PUM2	99	91.443	Macaca_nemestrina
ENSHCOG00000010119	pum2	90	76.802	ENSMLEG00000039243	PUM2	99	91.443	Mandrillus_leucophaeus
ENSHCOG00000010119	pum2	100	93.266	ENSMAMG00000006121	pum2	100	92.761	Mastacembelus_armatus
ENSHCOG00000010119	pum2	100	92.199	ENSMZEG00005000791	pum2	100	92.110	Maylandia_zebra
ENSHCOG00000010119	pum2	90	75.599	ENSMGAG00000014040	PUM2	100	75.093	Meleagris_gallopavo
ENSHCOG00000010119	pum2	90	76.710	ENSMAUG00000000311	Pum2	100	75.323	Mesocricetus_auratus
ENSHCOG00000010119	pum2	90	76.802	ENSMICG00000011647	PUM2	99	91.443	Microcebus_murinus
ENSHCOG00000010119	pum2	90	76.639	ENSMOCG00000013663	Pum2	100	75.185	Microtus_ochrogaster
ENSHCOG00000010119	pum2	90	91.187	ENSMMOG00000002975	pum2	100	91.365	Mola_mola
ENSHCOG00000010119	pum2	90	74.380	ENSMODG00000009811	PUM2	100	72.376	Monodelphis_domestica
ENSHCOG00000010119	pum2	85	85.965	MGP_CAROLIEiJ_G0017603	Pum2	99	91.443	Mus_caroli
ENSHCOG00000010119	pum2	85	85.746	ENSMUSG00000020594	Pum2	99	91.198	Mus_musculus
ENSHCOG00000010119	pum2	85	85.965	MGP_PahariEiJ_G0029361	Pum2	99	91.443	Mus_pahari
ENSHCOG00000010119	pum2	85	85.746	MGP_SPRETEiJ_G0018447	Pum2	99	91.198	Mus_spretus
ENSHCOG00000010119	pum2	90	75.970	ENSMPUG00000013734	PUM2	100	75.348	Mustela_putorius_furo
ENSHCOG00000010119	pum2	90	75.554	ENSMLUG00000007362	PUM2	100	74.931	Myotis_lucifugus
ENSHCOG00000010119	pum2	90	76.824	ENSNGAG00000016665	-	100	75.093	Nannospalax_galili
ENSHCOG00000010119	pum2	90	52.855	ENSNGAG00000016239	-	99	51.526	Nannospalax_galili
ENSHCOG00000010119	pum2	82	90.731	ENSNBRG00000020737	pum2	99	90.972	Neolamprologus_brichardi
ENSHCOG00000010119	pum2	77	91.505	ENSNLEG00000002509	PUM2	99	91.443	Nomascus_leucogenys
ENSHCOG00000010119	pum2	84	72.558	ENSMEUG00000016567	PUM2	100	66.790	Notamacropus_eugenii
ENSHCOG00000010119	pum2	69	70.044	ENSOPRG00000001963	PUM2	93	61.566	Ochotona_princeps
ENSHCOG00000010119	pum2	89	80.404	ENSODEG00000007823	PUM2	99	91.687	Octodon_degus
ENSHCOG00000010119	pum2	100	93.456	ENSONIG00000006119	pum2	100	93.535	Oreochromis_niloticus
ENSHCOG00000010119	pum2	90	76.063	ENSOCUG00000017908	PUM2	100	75.231	Oryctolagus_cuniculus
ENSHCOG00000010119	pum2	100	89.983	ENSORLG00000012611	pum2	100	89.983	Oryzias_latipes
ENSHCOG00000010119	pum2	100	90.067	ENSORLG00020014452	pum2	100	90.067	Oryzias_latipes_hni
ENSHCOG00000010119	pum2	100	90.067	ENSORLG00015009427	pum2	100	90.067	Oryzias_latipes_hsok
ENSHCOG00000010119	pum2	83	86.473	ENSOGAG00000002187	PUM2	99	92.643	Otolemur_garnettii
ENSHCOG00000010119	pum2	90	75.830	ENSOARG00000017236	PUM2	100	75.208	Ovis_aries
ENSHCOG00000010119	pum2	90	76.710	ENSPPAG00000023095	PUM2	99	91.443	Pan_paniscus
ENSHCOG00000010119	pum2	77	91.262	ENSPPRG00000021443	PUM2	99	91.198	Panthera_pardus
ENSHCOG00000010119	pum2	77	91.262	ENSPTIG00000018982	PUM2	99	91.198	Panthera_tigris_altaica
ENSHCOG00000010119	pum2	90	76.710	ENSPTRG00000011692	PUM2	99	91.443	Pan_troglodytes
ENSHCOG00000010119	pum2	90	66.971	ENSPANG00000009393	PUM2	100	85.915	Papio_anubis
ENSHCOG00000010119	pum2	100	74.486	ENSPSIG00000011626	PUM2	99	73.888	Pelodiscus_sinensis
ENSHCOG00000010119	pum2	90	75.970	ENSPEMG00000008357	Pum2	100	74.584	Peromyscus_maniculatus_bairdii
ENSHCOG00000010119	pum2	90	62.204	ENSPMAG00000007038	pum2	100	59.526	Petromyzon_marinus
ENSHCOG00000010119	pum2	75	88.592	ENSPCIG00000022139	PUM2	100	79.959	Phascolarctos_cinereus
ENSHCOG00000010119	pum2	100	91.687	ENSPFOG00000019208	pum2	100	91.445	Poecilia_formosa
ENSHCOG00000010119	pum2	100	93.115	ENSPLAG00000001826	pum2	100	92.695	Poecilia_latipinna
ENSHCOG00000010119	pum2	100	93.115	ENSPMEG00000015766	pum2	100	92.695	Poecilia_mexicana
ENSHCOG00000010119	pum2	90	76.895	ENSPPYG00000012617	PUM2	100	75.508	Pongo_abelii
ENSHCOG00000010119	pum2	63	89.130	ENSPCAG00000008001	PUM2	70	89.130	Procavia_capensis
ENSHCOG00000010119	pum2	84	85.965	ENSPCOG00000019636	PUM2	99	91.443	Propithecus_coquereli
ENSHCOG00000010119	pum2	88	70.892	ENSPVAG00000002920	PUM2	100	70.245	Pteropus_vampyrus
ENSHCOG00000010119	pum2	100	92.282	ENSPNYG00000022901	pum2	100	92.193	Pundamilia_nyererei
ENSHCOG00000010119	pum2	98	87.847	ENSPNAG00000008025	pum2	99	87.500	Pygocentrus_nattereri
ENSHCOG00000010119	pum2	85	85.526	ENSRNOG00000006180	Pum2	99	90.954	Rattus_norvegicus
ENSHCOG00000010119	pum2	85	85.965	ENSRBIG00000044880	PUM2	99	91.443	Rhinopithecus_bieti
ENSHCOG00000010119	pum2	90	76.710	ENSSBOG00000022007	PUM2	99	91.443	Saimiri_boliviensis_boliviensis
ENSHCOG00000010119	pum2	90	73.025	ENSSHAG00000002778	PUM2	100	71.494	Sarcophilus_harrisii
ENSHCOG00000010119	pum2	91	76.349	ENSSFOG00015003476	pum2	99	75.207	Scleropages_formosus
ENSHCOG00000010119	pum2	100	91.534	ENSSMAG00000018236	pum2	100	91.450	Scophthalmus_maximus
ENSHCOG00000010119	pum2	97	90.000	ENSSDUG00000001800	pum2	99	94.632	Seriola_dumerili
ENSHCOG00000010119	pum2	100	93.199	ENSSLDG00000000981	pum2	100	92.947	Seriola_lalandi_dorsalis
ENSHCOG00000010119	pum2	86	67.077	ENSSARG00000010992	PUM2	86	66.517	Sorex_araneus
ENSHCOG00000010119	pum2	89	76.328	ENSSPUG00000017012	PUM2	99	75.047	Sphenodon_punctatus
ENSHCOG00000010119	pum2	100	94.286	ENSSPAG00000022948	pum2	100	94.202	Stegastes_partitus
ENSHCOG00000010119	pum2	81	91.505	ENSSSCG00000008600	PUM2	99	91.443	Sus_scrofa
ENSHCOG00000010119	pum2	90	75.805	ENSTGUG00000013149	PUM2	100	75.301	Taeniopygia_guttata
ENSHCOG00000010119	pum2	100	88.131	ENSTRUG00000018167	pum2	100	87.113	Takifugu_rubripes
ENSHCOG00000010119	pum2	100	89.698	ENSTNIG00000003116	pum2	100	89.028	Tetraodon_nigroviridis
ENSHCOG00000010119	pum2	69	89.506	ENSTBEG00000008729	PUM2	77	86.486	Tupaia_belangeri
ENSHCOG00000010119	pum2	90	75.693	ENSTTRG00000004887	PUM2	100	75.070	Tursiops_truncatus
ENSHCOG00000010119	pum2	65	80.438	ENSUAMG00000008120	PUM2	97	79.819	Ursus_americanus
ENSHCOG00000010119	pum2	81	91.505	ENSUMAG00000023198	PUM2	99	91.443	Ursus_maritimus
ENSHCOG00000010119	pum2	90	76.015	ENSVPAG00000005056	PUM2	100	75.301	Vicugna_pacos
ENSHCOG00000010119	pum2	81	91.505	ENSVVUG00000014829	PUM2	99	91.443	Vulpes_vulpes
ENSHCOG00000010119	pum2	100	70.033	ENSXETG00000008903	pum2	100	68.623	Xenopus_tropicalis
ENSHCOG00000010119	pum2	97	88.813	ENSXCOG00000002556	pum2	99	92.947	Xiphophorus_couchianus
ENSHCOG00000010119	pum2	100	92.947	ENSXMAG00000017682	pum2	100	92.527	Xiphophorus_maculatus