EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000010122 (Gene tree)
Gene ID: 109512279
Gene Symbol: rbm8a
Alias: fb34f03|wu:fb34f03|zgc:110525
Full Name: RNA binding motif protein 8A
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 2568 bases
Position: chrKV879817.1:1965162-1967729
Accession: 109512279
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000022425	RRM_1	PF00076.22	4.1e-19	1	1
ENSHCOP00000022425	RRM_3	PF08777.11	1.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000001087	-	872	XM_019863900	ENSHCOP00000022425	173 (aa)	XP_019719459	UPI00094E9850

Gene Model

Click here to download ENSHCOG00000010122's gene model file

Pathways

Pathway ID	Pathway Name	Source
hcq03013	RNA transport	KEGG
hcq03015	mRNA surveillance pathway	KEGG
hcq03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000010122's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000010122	rbm8a	53	34.043	ENSHCOG00000000679	ncbp2	51	34.568

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000010122	rbm8a	86	90.066	ENSG00000265241	RBM8A	90	90.385	Homo_sapiens
ENSHCOG00000010122	rbm8a	90	94.937	ENSAPOG00000009727	rbm8a	89	96.154	Acanthochromis_polyacanthus
ENSHCOG00000010122	rbm8a	86	88.312	ENSAMEG00000017623	RBM8A	90	88.679	Ailuropoda_melanoleuca
ENSHCOG00000010122	rbm8a	91	94.375	ENSACIG00000017678	rbm8a	98	95.513	Amphilophus_citrinellus
ENSHCOG00000010122	rbm8a	90	94.937	ENSAOCG00000023887	rbm8a	75	96.154	Amphiprion_ocellaris
ENSHCOG00000010122	rbm8a	90	94.937	ENSAPEG00000022847	rbm8a	75	96.154	Amphiprion_percula
ENSHCOG00000010122	rbm8a	90	94.937	ENSATEG00000005630	rbm8a	89	96.154	Anabas_testudineus
ENSHCOG00000010122	rbm8a	86	90.066	ENSANAG00000004525	RBM8A	90	90.385	Aotus_nancymaae
ENSHCOG00000010122	rbm8a	90	94.937	ENSACLG00000009627	rbm8a	89	96.154	Astatotilapia_calliptera
ENSHCOG00000010122	rbm8a	86	93.377	ENSAMXG00000040754	rbm8a	90	93.590	Astyanax_mexicanus
ENSHCOG00000010122	rbm8a	75	56.489	WBGene00004387	rnp-4	83	58.678	Caenorhabditis_elegans
ENSHCOG00000010122	rbm8a	86	90.066	ENSCJAG00000046869	RBM8A	90	90.385	Callithrix_jacchus
ENSHCOG00000010122	rbm8a	86	90.066	ENSCAFG00000023172	RBM8A	90	90.385	Canis_familiaris
ENSHCOG00000010122	rbm8a	86	90.066	ENSCAFG00020019945	RBM8A	90	90.385	Canis_lupus_dingo
ENSHCOG00000010122	rbm8a	86	90.066	ENSCHIG00000012114	RBM8A	90	90.385	Capra_hircus
ENSHCOG00000010122	rbm8a	86	90.066	ENSTSYG00000028809	RBM8A	90	90.385	Carlito_syrichta
ENSHCOG00000010122	rbm8a	64	90.909	ENSCAPG00000014086	RBM8A	87	92.523	Cavia_aperea
ENSHCOG00000010122	rbm8a	90	89.241	ENSCPOG00000022453	RBM8A	93	90.385	Cavia_porcellus
ENSHCOG00000010122	rbm8a	86	90.066	ENSCCAG00000028589	-	90	90.385	Cebus_capucinus
ENSHCOG00000010122	rbm8a	86	89.404	ENSCCAG00000022460	-	90	89.744	Cebus_capucinus
ENSHCOG00000010122	rbm8a	86	90.066	ENSCATG00000021691	RBM8A	90	90.385	Cercocebus_atys
ENSHCOG00000010122	rbm8a	86	90.066	ENSCLAG00000000547	RBM8A	90	90.385	Chinchilla_lanigera
ENSHCOG00000010122	rbm8a	86	90.066	ENSCSAG00000001779	RBM8A	90	90.385	Chlorocebus_sabaeus
ENSHCOG00000010122	rbm8a	86	89.404	ENSCPBG00000007941	RBM8A	72	89.744	Chrysemys_picta_bellii
ENSHCOG00000010122	rbm8a	91	63.694	ENSCING00000004877	-	91	64.052	Ciona_intestinalis
ENSHCOG00000010122	rbm8a	88	63.399	ENSCSAVG00000005685	-	92	63.399	Ciona_savignyi
ENSHCOG00000010122	rbm8a	86	90.066	ENSCANG00000042182	RBM8A	90	90.385	Colobus_angolensis_palliatus
ENSHCOG00000010122	rbm8a	88	76.129	ENSCGRG00001003032	-	90	76.282	Cricetulus_griseus_chok1gshd
ENSHCOG00000010122	rbm8a	86	90.066	ENSCGRG00001002681	-	90	90.385	Cricetulus_griseus_chok1gshd
ENSHCOG00000010122	rbm8a	86	90.066	ENSCGRG00000006832	-	90	90.385	Cricetulus_griseus_crigri
ENSHCOG00000010122	rbm8a	100	95.429	ENSCSEG00000011865	rbm8a	100	95.429	Cynoglossus_semilaevis
ENSHCOG00000010122	rbm8a	90	92.949	ENSCVAG00000020734	rbm8a	89	94.156	Cyprinodon_variegatus
ENSHCOG00000010122	rbm8a	88	92.903	ENSDARG00000016516	rbm8a	90	92.949	Danio_rerio
ENSHCOG00000010122	rbm8a	53	85.714	ENSDNOG00000025265	-	100	85.714	Dasypus_novemcinctus
ENSHCOG00000010122	rbm8a	86	90.066	ENSDORG00000027340	-	98	83.832	Dipodomys_ordii
ENSHCOG00000010122	rbm8a	94	59.524	FBgn0033378	tsu	95	61.635	Drosophila_melanogaster
ENSHCOG00000010122	rbm8a	88	75.484	ENSETEG00000017932	-	90	75.641	Echinops_telfairi
ENSHCOG00000010122	rbm8a	81	83.916	ENSETEG00000008411	-	81	83.916	Echinops_telfairi
ENSHCOG00000010122	rbm8a	89	81.410	ENSEBUG00000010386	rbm8a	89	81.410	Eptatretus_burgeri
ENSHCOG00000010122	rbm8a	86	90.066	ENSEASG00005007455	RBM8A	90	90.385	Equus_asinus_asinus
ENSHCOG00000010122	rbm8a	86	90.066	ENSECAG00000022024	RBM8A	90	90.385	Equus_caballus
ENSHCOG00000010122	rbm8a	86	61.589	ENSEEUG00000008823	RBM8A	90	62.821	Erinaceus_europaeus
ENSHCOG00000010122	rbm8a	88	93.548	ENSELUG00000012464	rbm8a	89	93.590	Esox_lucius
ENSHCOG00000010122	rbm8a	86	90.066	ENSFCAG00000033936	RBM8A	90	90.385	Felis_catus
ENSHCOG00000010122	rbm8a	86	90.066	ENSFDAG00000020821	RBM8A	90	90.385	Fukomys_damarensis
ENSHCOG00000010122	rbm8a	90	93.590	ENSFHEG00000013538	rbm8a	89	94.805	Fundulus_heteroclitus
ENSHCOG00000010122	rbm8a	81	94.286	ENSGMOG00000007353	rbm8a	88	95.652	Gadus_morhua
ENSHCOG00000010122	rbm8a	86	75.839	ENSGALG00000036283	RBM8A	89	76.623	Gallus_gallus
ENSHCOG00000010122	rbm8a	90	93.038	ENSGAFG00000021698	rbm8a	89	94.231	Gambusia_affinis
ENSHCOG00000010122	rbm8a	91	96.815	ENSGACG00000013157	rbm8a	100	96.815	Gasterosteus_aculeatus
ENSHCOG00000010122	rbm8a	86	89.404	ENSGAGG00000023769	RBM8A	90	89.744	Gopherus_agassizii
ENSHCOG00000010122	rbm8a	86	90.066	ENSGGOG00000037248	RBM8A	90	90.385	Gorilla_gorilla
ENSHCOG00000010122	rbm8a	91	95.000	ENSHBUG00000008827	rbm8a	100	95.000	Haplochromis_burtoni
ENSHCOG00000010122	rbm8a	86	90.066	ENSHGLG00000007303	RBM8A	90	90.385	Heterocephalus_glaber_female
ENSHCOG00000010122	rbm8a	86	90.066	ENSHGLG00100012468	RBM8A	90	90.385	Heterocephalus_glaber_male
ENSHCOG00000010122	rbm8a	88	92.258	ENSIPUG00000006525	rbm8a	80	92.308	Ictalurus_punctatus
ENSHCOG00000010122	rbm8a	86	89.404	ENSSTOG00000013917	RBM8A	90	89.744	Ictidomys_tridecemlineatus
ENSHCOG00000010122	rbm8a	86	90.066	ENSJJAG00000009488	-	90	90.385	Jaculus_jaculus
ENSHCOG00000010122	rbm8a	90	91.772	ENSKMAG00000014454	rbm8a	89	92.949	Kryptolebias_marmoratus
ENSHCOG00000010122	rbm8a	90	94.304	ENSLBEG00000015720	rbm8a	89	95.513	Labrus_bergylta
ENSHCOG00000010122	rbm8a	88	89.172	ENSLACG00000014365	RBM8A	90	89.241	Latimeria_chalumnae
ENSHCOG00000010122	rbm8a	88	93.548	ENSLOCG00000009082	rbm8a	90	93.590	Lepisosteus_oculatus
ENSHCOG00000010122	rbm8a	88	90.323	ENSLAFG00000021886	-	90	90.385	Loxodonta_africana
ENSHCOG00000010122	rbm8a	99	63.483	ENSLAFG00000011031	-	90	63.522	Loxodonta_africana
ENSHCOG00000010122	rbm8a	86	90.066	ENSMFAG00000045376	RBM8A	90	90.385	Macaca_fascicularis
ENSHCOG00000010122	rbm8a	91	85.030	ENSMMUG00000016051	RBM8A	98	85.890	Macaca_mulatta
ENSHCOG00000010122	rbm8a	86	90.066	ENSMNEG00000040422	RBM8A	90	90.385	Macaca_nemestrina
ENSHCOG00000010122	rbm8a	86	90.066	ENSMLEG00000039155	RBM8A	90	90.385	Mandrillus_leucophaeus
ENSHCOG00000010122	rbm8a	90	93.671	ENSMAMG00000010565	rbm8a	89	94.872	Mastacembelus_armatus
ENSHCOG00000010122	rbm8a	90	94.937	ENSMZEG00005016453	rbm8a	89	96.154	Maylandia_zebra
ENSHCOG00000010122	rbm8a	86	90.066	ENSMAUG00000016783	-	98	84.337	Mesocricetus_auratus
ENSHCOG00000010122	rbm8a	91	72.500	ENSMICG00000037163	-	94	74.510	Microcebus_murinus
ENSHCOG00000010122	rbm8a	86	90.066	ENSMICG00000031698	-	90	90.385	Microcebus_murinus
ENSHCOG00000010122	rbm8a	86	90.066	ENSMOCG00000017782	-	90	90.385	Microtus_ochrogaster
ENSHCOG00000010122	rbm8a	91	84.177	ENSMMOG00000017179	rbm8a	92	85.065	Mola_mola
ENSHCOG00000010122	rbm8a	86	90.728	ENSMODG00000018752	RBM8A	90	91.026	Monodelphis_domestica
ENSHCOG00000010122	rbm8a	90	91.772	ENSMALG00000010145	rbm8a	89	92.949	Monopterus_albus
ENSHCOG00000010122	rbm8a	86	90.066	MGP_CAROLIEiJ_G0025383	Rbm8a	98	83.832	Mus_caroli
ENSHCOG00000010122	rbm8a	86	88.742	MGP_CAROLIEiJ_G0014951	Rbm8a2	90	89.103	Mus_caroli
ENSHCOG00000010122	rbm8a	86	90.066	ENSMUSG00000038374	Rbm8a	98	83.832	Mus_musculus
ENSHCOG00000010122	rbm8a	86	88.742	ENSMUSG00000078184	Rbm8a2	90	89.103	Mus_musculus
ENSHCOG00000010122	rbm8a	86	90.066	MGP_PahariEiJ_G0026828	-	98	83.832	Mus_pahari
ENSHCOG00000010122	rbm8a	86	90.066	MGP_SPRETEiJ_G0026330	Rbm8a	98	83.832	Mus_spretus
ENSHCOG00000010122	rbm8a	86	90.066	ENSMPUG00000000775	RBM8A	90	90.385	Mustela_putorius_furo
ENSHCOG00000010122	rbm8a	86	84.564	ENSMLUG00000022711	-	89	85.065	Myotis_lucifugus
ENSHCOG00000010122	rbm8a	86	90.066	ENSMLUG00000017436	-	90	90.385	Myotis_lucifugus
ENSHCOG00000010122	rbm8a	88	90.323	ENSNGAG00000016038	-	90	90.385	Nannospalax_galili
ENSHCOG00000010122	rbm8a	90	94.937	ENSNBRG00000004541	rbm8a	89	96.154	Neolamprologus_brichardi
ENSHCOG00000010122	rbm8a	86	90.066	ENSNLEG00000029632	RBM8A	90	90.385	Nomascus_leucogenys
ENSHCOG00000010122	rbm8a	62	93.519	ENSMEUG00000016058	RBM8A	86	93.805	Notamacropus_eugenii
ENSHCOG00000010122	rbm8a	65	89.474	ENSOPRG00000013316	RBM8A	100	89.474	Ochotona_princeps
ENSHCOG00000010122	rbm8a	86	90.066	ENSODEG00000000114	-	90	90.385	Octodon_degus
ENSHCOG00000010122	rbm8a	86	78.808	ENSODEG00000008563	-	89	79.487	Octodon_degus
ENSHCOG00000010122	rbm8a	86	76.159	ENSODEG00000002094	-	89	76.923	Octodon_degus
ENSHCOG00000010122	rbm8a	90	94.937	ENSONIG00000008608	rbm8a	89	96.154	Oreochromis_niloticus
ENSHCOG00000010122	rbm8a	86	88.312	ENSOCUG00000025693	RBM8A	90	88.679	Oryctolagus_cuniculus
ENSHCOG00000010122	rbm8a	90	92.405	ENSORLG00000016263	rbm8a	89	93.590	Oryzias_latipes
ENSHCOG00000010122	rbm8a	91	92.500	ENSORLG00020012904	rbm8a	83	93.590	Oryzias_latipes_hni
ENSHCOG00000010122	rbm8a	90	92.405	ENSORLG00015018824	rbm8a	89	93.590	Oryzias_latipes_hsok
ENSHCOG00000010122	rbm8a	90	93.038	ENSOMEG00000021533	rbm8a	70	94.231	Oryzias_melastigma
ENSHCOG00000010122	rbm8a	86	88.312	ENSOGAG00000000202	RBM8A	90	88.679	Otolemur_garnettii
ENSHCOG00000010122	rbm8a	86	89.404	ENSOARG00000020634	RBM8A	90	89.744	Ovis_aries
ENSHCOG00000010122	rbm8a	86	90.066	ENSPPAG00000029116	RBM8A	90	90.385	Pan_paniscus
ENSHCOG00000010122	rbm8a	86	90.066	ENSPPRG00000008243	RBM8A	90	90.385	Panthera_pardus
ENSHCOG00000010122	rbm8a	86	90.066	ENSPTIG00000009472	RBM8A	90	90.385	Panthera_tigris_altaica
ENSHCOG00000010122	rbm8a	86	90.066	ENSPTRG00000001201	RBM8A	90	90.385	Pan_troglodytes
ENSHCOG00000010122	rbm8a	86	90.066	ENSPANG00000020584	RBM8A	90	90.385	Papio_anubis
ENSHCOG00000010122	rbm8a	90	91.083	ENSPKIG00000009551	rbm8a	66	91.667	Paramormyrops_kingsleyae
ENSHCOG00000010122	rbm8a	88	93.464	ENSPKIG00000020558	rbm8a	90	93.506	Paramormyrops_kingsleyae
ENSHCOG00000010122	rbm8a	90	94.937	ENSPMGG00000010122	rbm8a	89	96.154	Periophthalmus_magnuspinnatus
ENSHCOG00000010122	rbm8a	86	90.066	ENSPEMG00000018117	-	90	90.385	Peromyscus_maniculatus_bairdii
ENSHCOG00000010122	rbm8a	86	90.728	ENSPCIG00000011931	RBM8A	90	91.026	Phascolarctos_cinereus
ENSHCOG00000010122	rbm8a	90	92.405	ENSPFOG00000010695	rbm8a	89	93.590	Poecilia_formosa
ENSHCOG00000010122	rbm8a	90	92.405	ENSPLAG00000009183	rbm8a	89	93.590	Poecilia_latipinna
ENSHCOG00000010122	rbm8a	90	92.405	ENSPMEG00000013950	rbm8a	89	93.590	Poecilia_mexicana
ENSHCOG00000010122	rbm8a	91	93.125	ENSPREG00000017572	rbm8a	98	94.231	Poecilia_reticulata
ENSHCOG00000010122	rbm8a	86	90.066	ENSPPYG00000000929	RBM8A	90	90.385	Pongo_abelii
ENSHCOG00000010122	rbm8a	88	89.677	ENSPCAG00000002146	-	90	89.744	Procavia_capensis
ENSHCOG00000010122	rbm8a	86	90.066	ENSPCOG00000022886	RBM8A	90	90.385	Propithecus_coquereli
ENSHCOG00000010122	rbm8a	86	90.066	ENSPVAG00000014471	RBM8A	90	90.385	Pteropus_vampyrus
ENSHCOG00000010122	rbm8a	90	94.937	ENSPNYG00000013564	rbm8a	89	96.154	Pundamilia_nyererei
ENSHCOG00000010122	rbm8a	88	94.839	ENSPNAG00000028502	rbm8a	90	94.872	Pygocentrus_nattereri
ENSHCOG00000010122	rbm8a	86	90.066	ENSRNOG00000021215	Rbm8a	90	90.385	Rattus_norvegicus
ENSHCOG00000010122	rbm8a	86	90.066	ENSRBIG00000039233	RBM8A	90	90.385	Rhinopithecus_bieti
ENSHCOG00000010122	rbm8a	86	84.768	ENSRROG00000033023	-	89	84.615	Rhinopithecus_roxellana
ENSHCOG00000010122	rbm8a	86	90.066	ENSRROG00000040324	-	90	90.385	Rhinopithecus_roxellana
ENSHCOG00000010122	rbm8a	86	90.066	ENSSBOG00000031316	RBM8A	90	90.385	Saimiri_boliviensis_boliviensis
ENSHCOG00000010122	rbm8a	86	90.728	ENSSHAG00000018629	RBM8A	90	91.026	Sarcophilus_harrisii
ENSHCOG00000010122	rbm8a	88	94.194	ENSSFOG00015009007	rbm8a	90	94.231	Scleropages_formosus
ENSHCOG00000010122	rbm8a	88	92.258	ENSSFOG00015024171	rbm8a	90	92.308	Scleropages_formosus
ENSHCOG00000010122	rbm8a	100	95.429	ENSSMAG00000012998	rbm8a	100	95.429	Scophthalmus_maximus
ENSHCOG00000010122	rbm8a	90	94.937	ENSSDUG00000005911	rbm8a	89	96.154	Seriola_dumerili
ENSHCOG00000010122	rbm8a	90	94.937	ENSSLDG00000011664	rbm8a	89	96.154	Seriola_lalandi_dorsalis
ENSHCOG00000010122	rbm8a	86	90.066	ENSSARG00000013289	RBM8A	90	90.385	Sorex_araneus
ENSHCOG00000010122	rbm8a	86	90.066	ENSSPUG00000001576	RBM8A	90	90.385	Sphenodon_punctatus
ENSHCOG00000010122	rbm8a	90	94.937	ENSSPAG00000012181	rbm8a	89	96.154	Stegastes_partitus
ENSHCOG00000010122	rbm8a	86	90.066	ENSSSCG00000028509	RBM8A	90	90.385	Sus_scrofa
ENSHCOG00000010122	rbm8a	86	86.755	ENSTGUG00000004447	RBM8A	90	87.179	Taeniopygia_guttata
ENSHCOG00000010122	rbm8a	90	95.513	ENSTRUG00000013173	rbm8a	91	96.078	Takifugu_rubripes
ENSHCOG00000010122	rbm8a	90	91.772	ENSTNIG00000006869	rbm8a	89	92.949	Tetraodon_nigroviridis
ENSHCOG00000010122	rbm8a	65	89.474	ENSTBEG00000014947	RBM8A	100	89.474	Tupaia_belangeri
ENSHCOG00000010122	rbm8a	74	91.406	ENSTTRG00000009081	RBM8A	88	91.729	Tursiops_truncatus
ENSHCOG00000010122	rbm8a	86	90.066	ENSUAMG00000021929	RBM8A	90	90.385	Ursus_americanus
ENSHCOG00000010122	rbm8a	86	90.066	ENSUMAG00000010298	RBM8A	90	90.385	Ursus_maritimus
ENSHCOG00000010122	rbm8a	86	90.066	ENSVVUG00000007486	RBM8A	90	90.385	Vulpes_vulpes
ENSHCOG00000010122	rbm8a	90	93.038	ENSXCOG00000004369	rbm8a	89	94.231	Xiphophorus_couchianus
ENSHCOG00000010122	rbm8a	91	94.304	ENSXMAG00000013463	rbm8a	97	95.455	Xiphophorus_maculatus