EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000010165 (Gene tree)
Gene ID: 109512952
Gene Symbol: apex2
Alias: zgc:55889
Full Name: DNA-(apurinic or apyrimidinic site) lyase 2-like
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 3185 bases
Position: chrKV879835.1:203476-206660
Accession: 109512952
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000008024	Exo_endo_phos	PF03372.23	2.5e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000001017	-	1721	XM_019865078	ENSHCOP00000008024	525 (aa)	XP_019720637	UPI00094E7153

Gene Model

Click here to download ENSHCOG00000010165's gene model file

Pathways

Pathway ID	Pathway Name	Source
hcq03410	Base excision repair	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000010165's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000010165	apex2	99	47.664	ENSG00000169188	APEX2	99	47.664	Homo_sapiens
ENSHCOG00000010165	apex2	100	68.449	ENSAPOG00000005805	apex2	100	68.093	Acanthochromis_polyacanthus
ENSHCOG00000010165	apex2	99	47.388	ENSAMEG00000003608	APEX2	99	47.388	Ailuropoda_melanoleuca
ENSHCOG00000010165	apex2	100	68.617	ENSACIG00000010000	apex2	100	68.617	Amphilophus_citrinellus
ENSHCOG00000010165	apex2	100	68.861	ENSAOCG00000021774	apex2	100	68.984	Amphiprion_ocellaris
ENSHCOG00000010165	apex2	100	68.861	ENSAPEG00000020890	apex2	94	68.984	Amphiprion_percula
ENSHCOG00000010165	apex2	100	67.832	ENSATEG00000023600	apex2	100	67.832	Anabas_testudineus
ENSHCOG00000010165	apex2	99	48.956	ENSACAG00000011201	APEX2	99	49.146	Anolis_carolinensis
ENSHCOG00000010165	apex2	99	47.566	ENSANAG00000021907	-	99	47.566	Aotus_nancymaae
ENSHCOG00000010165	apex2	96	41.477	ENSANAG00000020845	-	99	41.477	Aotus_nancymaae
ENSHCOG00000010165	apex2	100	60.791	ENSAMXG00000007422	apex2	100	60.971	Astyanax_mexicanus
ENSHCOG00000010165	apex2	99	48.224	ENSBTAG00000013177	APEX2	99	48.224	Bos_taurus
ENSHCOG00000010165	apex2	99	47.004	ENSCJAG00000016584	APEX2	99	47.004	Callithrix_jacchus
ENSHCOG00000010165	apex2	99	44.834	ENSCAFG00000014310	APEX2	99	44.834	Canis_familiaris
ENSHCOG00000010165	apex2	99	45.756	ENSCAFG00020013818	APEX2	93	57.143	Canis_lupus_dingo
ENSHCOG00000010165	apex2	99	47.689	ENSCHIG00000019916	APEX2	99	48.429	Capra_hircus
ENSHCOG00000010165	apex2	99	48.502	ENSTSYG00000005612	APEX2	99	48.502	Carlito_syrichta
ENSHCOG00000010165	apex2	99	46.481	ENSCPOG00000007265	APEX2	99	46.481	Cavia_porcellus
ENSHCOG00000010165	apex2	96	41.980	ENSCCAG00000025405	-	96	41.980	Cebus_capucinus
ENSHCOG00000010165	apex2	99	46.898	ENSCATG00000044854	APEX2	99	46.898	Cercocebus_atys
ENSHCOG00000010165	apex2	99	47.566	ENSCLAG00000017315	APEX2	99	47.566	Chinchilla_lanigera
ENSHCOG00000010165	apex2	99	47.080	ENSCSAG00000012124	APEX2	99	47.080	Chlorocebus_sabaeus
ENSHCOG00000010165	apex2	100	46.805	ENSCPBG00000016631	APEX2	99	45.911	Chrysemys_picta_bellii
ENSHCOG00000010165	apex2	99	44.383	ENSCSAVG00000006052	-	100	44.383	Ciona_savignyi
ENSHCOG00000010165	apex2	99	47.037	ENSCANG00000003053	APEX2	99	47.037	Colobus_angolensis_palliatus
ENSHCOG00000010165	apex2	99	46.904	ENSCGRG00001008132	Apex2	99	46.904	Cricetulus_griseus_chok1gshd
ENSHCOG00000010165	apex2	99	46.904	ENSCGRG00000009667	Apex2	89	59.447	Cricetulus_griseus_crigri
ENSHCOG00000010165	apex2	100	65.499	ENSCSEG00000019900	apex2	99	65.499	Cynoglossus_semilaevis
ENSHCOG00000010165	apex2	100	66.958	ENSCVAG00000021583	apex2	100	66.958	Cyprinodon_variegatus
ENSHCOG00000010165	apex2	100	60.714	ENSDARG00000008472	apex2	100	60.714	Danio_rerio
ENSHCOG00000010165	apex2	99	46.753	ENSDNOG00000038901	APEX2	99	46.753	Dasypus_novemcinctus
ENSHCOG00000010165	apex2	99	46.226	ENSEBUG00000015654	apex2	100	46.226	Eptatretus_burgeri
ENSHCOG00000010165	apex2	99	48.593	ENSEASG00005011694	APEX2	90	48.593	Equus_asinus_asinus
ENSHCOG00000010165	apex2	99	48.593	ENSECAG00000026921	APEX2	90	48.593	Equus_caballus
ENSHCOG00000010165	apex2	99	47.004	ENSEEUG00000013172	APEX2	99	47.004	Erinaceus_europaeus
ENSHCOG00000010165	apex2	100	61.880	ENSELUG00000021417	apex2	99	61.880	Esox_lucius
ENSHCOG00000010165	apex2	99	46.555	ENSFCAG00000021990	APEX2	99	46.555	Felis_catus
ENSHCOG00000010165	apex2	99	47.004	ENSFDAG00000008076	APEX2	88	61.538	Fukomys_damarensis
ENSHCOG00000010165	apex2	100	62.568	ENSFHEG00000021411	apex2	99	62.749	Fundulus_heteroclitus
ENSHCOG00000010165	apex2	65	76.667	ENSGMOG00000019681	apex2	97	76.667	Gadus_morhua
ENSHCOG00000010165	apex2	100	66.314	ENSGAFG00000005829	apex2	100	67.196	Gambusia_affinis
ENSHCOG00000010165	apex2	65	81.143	ENSGACG00000012307	apex2	90	79.888	Gasterosteus_aculeatus
ENSHCOG00000010165	apex2	90	44.491	ENSGAGG00000011520	APEX2	88	44.491	Gopherus_agassizii
ENSHCOG00000010165	apex2	99	47.477	ENSGGOG00000002056	APEX2	99	47.477	Gorilla_gorilla
ENSHCOG00000010165	apex2	100	69.358	ENSHBUG00000009938	apex2	100	69.358	Haplochromis_burtoni
ENSHCOG00000010165	apex2	99	47.378	ENSHGLG00000000273	APEX2	89	61.058	Heterocephalus_glaber_female
ENSHCOG00000010165	apex2	100	56.775	ENSIPUG00000000352	APEX2	100	56.775	Ictalurus_punctatus
ENSHCOG00000010165	apex2	99	47.191	ENSSTOG00000025121	APEX2	85	62.500	Ictidomys_tridecemlineatus
ENSHCOG00000010165	apex2	99	47.655	ENSJJAG00000019611	Apex2	93	59.346	Jaculus_jaculus
ENSHCOG00000010165	apex2	100	66.787	ENSKMAG00000006985	apex2	100	66.787	Kryptolebias_marmoratus
ENSHCOG00000010165	apex2	100	68.366	ENSLBEG00000012139	apex2	100	68.366	Labrus_bergylta
ENSHCOG00000010165	apex2	100	50.268	ENSLACG00000000865	APEX2	100	50.268	Latimeria_chalumnae
ENSHCOG00000010165	apex2	100	58.947	ENSLOCG00000014467	apex2	100	59.370	Lepisosteus_oculatus
ENSHCOG00000010165	apex2	99	47.486	ENSLAFG00000018312	APEX2	99	47.486	Loxodonta_africana
ENSHCOG00000010165	apex2	99	47.080	ENSMFAG00000002486	APEX2	99	47.080	Macaca_fascicularis
ENSHCOG00000010165	apex2	99	47.330	ENSMMUG00000008428	APEX2	99	47.330	Macaca_mulatta
ENSHCOG00000010165	apex2	99	47.080	ENSMNEG00000036783	APEX2	99	47.080	Macaca_nemestrina
ENSHCOG00000010165	apex2	99	46.898	ENSMLEG00000028208	APEX2	99	46.898	Mandrillus_leucophaeus
ENSHCOG00000010165	apex2	100	65.068	ENSMAMG00000024220	apex2	100	65.068	Mastacembelus_armatus
ENSHCOG00000010165	apex2	100	68.991	ENSMZEG00005026322	apex2	100	68.991	Maylandia_zebra
ENSHCOG00000010165	apex2	99	47.004	ENSMICG00000043181	APEX2	99	47.004	Microcebus_murinus
ENSHCOG00000010165	apex2	99	46.341	ENSMOCG00000004339	Apex2	88	59.716	Microtus_ochrogaster
ENSHCOG00000010165	apex2	100	64.737	ENSMMOG00000017340	apex2	100	65.849	Mola_mola
ENSHCOG00000010165	apex2	99	52.841	ENSMODG00000005341	APEX2	99	52.841	Monodelphis_domestica
ENSHCOG00000010165	apex2	100	65.352	ENSMALG00000014179	apex2	100	65.352	Monopterus_albus
ENSHCOG00000010165	apex2	99	47.761	MGP_CAROLIEiJ_G0033484	Apex2	100	55.431	Mus_caroli
ENSHCOG00000010165	apex2	99	47.761	ENSMUSG00000025269	Apex2	99	55.431	Mus_musculus
ENSHCOG00000010165	apex2	99	48.134	MGP_PahariEiJ_G0032023	Apex2	100	55.805	Mus_pahari
ENSHCOG00000010165	apex2	99	47.761	MGP_SPRETEiJ_G0034654	Apex2	100	55.431	Mus_spretus
ENSHCOG00000010165	apex2	99	47.191	ENSMPUG00000003293	APEX2	99	47.191	Mustela_putorius_furo
ENSHCOG00000010165	apex2	99	47.004	ENSMLUG00000004562	-	99	47.004	Myotis_lucifugus
ENSHCOG00000010165	apex2	99	47.368	ENSMLUG00000016298	-	99	47.368	Myotis_lucifugus
ENSHCOG00000010165	apex2	99	47.114	ENSNGAG00000013576	Apex2	99	47.114	Nannospalax_galili
ENSHCOG00000010165	apex2	100	67.021	ENSNBRG00000010099	apex2	100	67.021	Neolamprologus_brichardi
ENSHCOG00000010165	apex2	71	56.299	ENSNLEG00000032067	-	91	56.299	Nomascus_leucogenys
ENSHCOG00000010165	apex2	99	70.677	ENSONIG00000016881	apex2	99	70.677	Oreochromis_niloticus
ENSHCOG00000010165	apex2	92	55.488	ENSOANG00000000689	-	96	55.645	Ornithorhynchus_anatinus
ENSHCOG00000010165	apex2	99	41.078	ENSOCUG00000000570	APEX2	99	41.078	Oryctolagus_cuniculus
ENSHCOG00000010165	apex2	100	68.174	ENSORLG00000014053	apex2	100	68.174	Oryzias_latipes
ENSHCOG00000010165	apex2	100	66.726	ENSORLG00020013253	apex2	100	66.726	Oryzias_latipes_hni
ENSHCOG00000010165	apex2	100	67.450	ENSORLG00015007515	apex2	100	67.450	Oryzias_latipes_hsok
ENSHCOG00000010165	apex2	100	66.546	ENSOMEG00000003655	apex2	100	66.546	Oryzias_melastigma
ENSHCOG00000010165	apex2	99	48.037	ENSOGAG00000007797	APEX2	99	48.037	Otolemur_garnettii
ENSHCOG00000010165	apex2	99	47.505	ENSOARG00000005742	APEX2	99	48.244	Ovis_aries
ENSHCOG00000010165	apex2	99	47.948	ENSPPAG00000035747	APEX2	99	47.948	Pan_paniscus
ENSHCOG00000010165	apex2	99	46.927	ENSPPRG00000002440	APEX2	99	46.927	Panthera_pardus
ENSHCOG00000010165	apex2	99	46.741	ENSPTIG00000021651	APEX2	99	46.741	Panthera_tigris_altaica
ENSHCOG00000010165	apex2	99	47.948	ENSPTRG00000021946	APEX2	99	47.948	Pan_troglodytes
ENSHCOG00000010165	apex2	99	46.898	ENSPANG00000003595	APEX2	99	46.898	Papio_anubis
ENSHCOG00000010165	apex2	100	59.893	ENSPKIG00000007752	apex2	100	60.428	Paramormyrops_kingsleyae
ENSHCOG00000010165	apex2	100	66.667	ENSPMGG00000009151	apex2	100	66.667	Periophthalmus_magnuspinnatus
ENSHCOG00000010165	apex2	99	47.015	ENSPEMG00000016475	Apex2	89	58.716	Peromyscus_maniculatus_bairdii
ENSHCOG00000010165	apex2	99	52.099	ENSPCIG00000007633	APEX2	98	52.481	Phascolarctos_cinereus
ENSHCOG00000010165	apex2	100	67.196	ENSPFOG00000000408	apex2	100	67.196	Poecilia_formosa
ENSHCOG00000010165	apex2	100	67.196	ENSPLAG00000023814	apex2	100	67.196	Poecilia_latipinna
ENSHCOG00000010165	apex2	100	67.196	ENSPMEG00000023222	apex2	100	67.196	Poecilia_mexicana
ENSHCOG00000010165	apex2	99	47.850	ENSPPYG00000020388	APEX2	99	47.850	Pongo_abelii
ENSHCOG00000010165	apex2	99	48.689	ENSPCOG00000016083	APEX2	99	48.689	Propithecus_coquereli
ENSHCOG00000010165	apex2	92	47.925	ENSPVAG00000007851	APEX2	99	47.925	Pteropus_vampyrus
ENSHCOG00000010165	apex2	100	67.616	ENSPNYG00000015698	apex2	100	67.616	Pundamilia_nyererei
ENSHCOG00000010165	apex2	100	57.094	ENSPNAG00000011666	apex2	100	57.094	Pygocentrus_nattereri
ENSHCOG00000010165	apex2	99	47.655	ENSRNOG00000000166	Apex2	99	47.655	Rattus_norvegicus
ENSHCOG00000010165	apex2	99	47.037	ENSRBIG00000036500	APEX2	99	47.037	Rhinopithecus_bieti
ENSHCOG00000010165	apex2	99	47.037	ENSRROG00000032674	APEX2	99	47.037	Rhinopithecus_roxellana
ENSHCOG00000010165	apex2	96	39.114	ENSSBOG00000003489	-	96	39.114	Saimiri_boliviensis_boliviensis
ENSHCOG00000010165	apex2	99	47.378	ENSSBOG00000030500	-	99	47.378	Saimiri_boliviensis_boliviensis
ENSHCOG00000010165	apex2	99	53.890	ENSSHAG00000007846	APEX2	99	53.890	Sarcophilus_harrisii
ENSHCOG00000010165	apex2	100	63.051	ENSSFOG00015010354	apex2	100	63.051	Scleropages_formosus
ENSHCOG00000010165	apex2	100	68.134	ENSSMAG00000012753	apex2	100	68.134	Scophthalmus_maximus
ENSHCOG00000010165	apex2	100	70.939	ENSSDUG00000022892	apex2	100	70.939	Seriola_dumerili
ENSHCOG00000010165	apex2	100	71.298	ENSSLDG00000024347	apex2	100	71.298	Seriola_lalandi_dorsalis
ENSHCOG00000010165	apex2	99	47.655	ENSSARG00000010297	APEX2	99	47.655	Sorex_araneus
ENSHCOG00000010165	apex2	100	69.751	ENSSPAG00000016279	apex2	100	69.982	Stegastes_partitus
ENSHCOG00000010165	apex2	99	48.315	ENSSSCG00000012348	-	99	48.315	Sus_scrofa
ENSHCOG00000010165	apex2	100	65.412	ENSTRUG00000015660	apex2	100	65.412	Takifugu_rubripes
ENSHCOG00000010165	apex2	84	62.061	ENSTNIG00000003725	apex2	99	62.187	Tetraodon_nigroviridis
ENSHCOG00000010165	apex2	92	47.826	ENSTBEG00000010520	APEX2	99	47.826	Tupaia_belangeri
ENSHCOG00000010165	apex2	99	47.378	ENSUAMG00000004720	APEX2	87	61.538	Ursus_americanus
ENSHCOG00000010165	apex2	99	45.216	ENSUMAG00000002892	APEX2	99	45.234	Ursus_maritimus
ENSHCOG00000010165	apex2	99	46.255	ENSVVUG00000005989	APEX2	99	46.255	Vulpes_vulpes
ENSHCOG00000010165	apex2	99	52.809	ENSXETG00000022026	apex2	99	52.809	Xenopus_tropicalis
ENSHCOG00000010165	apex2	100	67.434	ENSXMAG00000025740	apex2	100	67.434	Xiphophorus_maculatus