EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000010170 (Gene tree)
Gene ID: 109508437
Gene Symbol: chd3
Alias: -
Full Name: chromodomain helicase DNA binding protein 3
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 23308 bases
Position: chrKV880522.1:2302157-2325464
Accession: 109508437
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000022447	ResIII	PF04851.15	3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000001043	-	6193	XM_019858411	ENSHCOP00000022447	2012 (aa)	XP_019713970	-
ENSHCOT00000001075	-	1257	-	ENSHCOP00000022433	418 (aa)	-	-

Gene Model

Click here to download ENSHCOG00000010170's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000010170's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000010170	chd3	82	70.149	ENSHCOG00000017525	-	98	70.149
ENSHCOG00000010170	chd3	72	71.507	ENSHCOG00000014308	-	89	71.225

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000010170	chd3	96	73.357	ENSG00000170004	CHD3	99	66.850	Homo_sapiens
ENSHCOG00000010170	chd3	79	91.579	ENSAPOG00000005614	chd3	94	91.579	Acanthochromis_polyacanthus
ENSHCOG00000010170	chd3	66	76.435	ENSAMEG00000003025	-	95	76.361	Ailuropoda_melanoleuca
ENSHCOG00000010170	chd3	81	93.514	ENSACIG00000019671	chd3	99	93.514	Amphilophus_citrinellus
ENSHCOG00000010170	chd3	99	86.348	ENSAOCG00000023784	chd3	97	91.579	Amphiprion_ocellaris
ENSHCOG00000010170	chd3	99	86.547	ENSAPEG00000006341	chd3	97	86.424	Amphiprion_percula
ENSHCOG00000010170	chd3	99	85.223	ENSATEG00000000848	chd3	95	91.053	Anabas_testudineus
ENSHCOG00000010170	chd3	92	75.466	ENSACAG00000004276	CHD3	88	74.973	Anolis_carolinensis
ENSHCOG00000010170	chd3	92	75.040	ENSANAG00000034323	CHD3	95	74.386	Aotus_nancymaae
ENSHCOG00000010170	chd3	88	90.323	ENSACLG00000009222	chd3	96	85.624	Astatotilapia_calliptera
ENSHCOG00000010170	chd3	96	73.032	ENSBTAG00000014377	CHD3	94	72.559	Bos_taurus
ENSHCOG00000010170	chd3	96	73.306	ENSCJAG00000014766	CHD3	93	72.769	Callithrix_jacchus
ENSHCOG00000010170	chd3	96	72.950	ENSCAFG00000016859	CHD3	93	72.474	Canis_familiaris
ENSHCOG00000010170	chd3	92	74.693	ENSCAFG00020007422	CHD3	96	74.169	Canis_lupus_dingo
ENSHCOG00000010170	chd3	96	72.912	ENSCHIG00000016737	CHD3	94	72.179	Capra_hircus
ENSHCOG00000010170	chd3	96	73.306	ENSTSYG00000035658	CHD3	96	72.519	Carlito_syrichta
ENSHCOG00000010170	chd3	96	70.723	ENSCAPG00000014864	CHD3	93	69.964	Cavia_aperea
ENSHCOG00000010170	chd3	96	73.167	ENSCPOG00000022653	CHD3	93	72.437	Cavia_porcellus
ENSHCOG00000010170	chd3	96	73.357	ENSCCAG00000034792	CHD3	93	72.821	Cebus_capucinus
ENSHCOG00000010170	chd3	96	72.959	ENSCATG00000041717	CHD3	93	72.357	Cercocebus_atys
ENSHCOG00000010170	chd3	96	72.893	ENSCLAG00000010523	CHD3	95	72.162	Chinchilla_lanigera
ENSHCOG00000010170	chd3	96	73.034	ENSCSAG00000011122	CHD3	94	72.506	Chlorocebus_sabaeus
ENSHCOG00000010170	chd3	88	74.480	ENSCPBG00000011966	CHD3	99	73.861	Chrysemys_picta_bellii
ENSHCOG00000010170	chd3	96	72.857	ENSCANG00000037641	CHD3	96	71.375	Colobus_angolensis_palliatus
ENSHCOG00000010170	chd3	96	72.389	ENSCGRG00001011306	Chd3	95	71.846	Cricetulus_griseus_chok1gshd
ENSHCOG00000010170	chd3	91	68.409	ENSCGRG00000007878	Chd3	93	68.147	Cricetulus_griseus_crigri
ENSHCOG00000010170	chd3	90	86.724	ENSCSEG00000004489	chd3	99	86.196	Cynoglossus_semilaevis
ENSHCOG00000010170	chd3	86	91.498	ENSCVAG00000007293	chd3	95	91.129	Cyprinodon_variegatus
ENSHCOG00000010170	chd3	88	87.654	ENSDARG00000021405	chd3	96	83.588	Danio_rerio
ENSHCOG00000010170	chd3	88	73.765	ENSDNOG00000047846	CHD3	85	73.603	Dasypus_novemcinctus
ENSHCOG00000010170	chd3	96	72.912	ENSDORG00000010713	Chd3	95	72.385	Dipodomys_ordii
ENSHCOG00000010170	chd3	96	68.161	ENSETEG00000017733	CHD3	93	69.765	Echinops_telfairi
ENSHCOG00000010170	chd3	90	74.959	ENSEASG00005019360	CHD3	96	74.346	Equus_asinus_asinus
ENSHCOG00000010170	chd3	90	74.728	ENSECAG00000010051	CHD3	96	74.114	Equus_caballus
ENSHCOG00000010170	chd3	83	89.691	ENSEEUG00000015205	CHD3	84	71.852	Erinaceus_europaeus
ENSHCOG00000010170	chd3	77	95.238	ENSELUG00000019499	chd3	99	95.238	Esox_lucius
ENSHCOG00000010170	chd3	96	73.198	ENSFCAG00000009629	CHD3	90	72.573	Felis_catus
ENSHCOG00000010170	chd3	92	74.017	ENSFDAG00000008220	CHD3	91	73.433	Fukomys_damarensis
ENSHCOG00000010170	chd3	83	89.565	ENSGMOG00000013599	chd3	86	89.565	Gadus_morhua
ENSHCOG00000010170	chd3	58	83.051	ENSGAFG00000004055	chd3	99	85.593	Gambusia_affinis
ENSHCOG00000010170	chd3	96	79.460	ENSGACG00000019275	chd3	96	78.812	Gasterosteus_aculeatus
ENSHCOG00000010170	chd3	71	79.318	ENSGAGG00000013164	CHD3	97	76.395	Gopherus_agassizii
ENSHCOG00000010170	chd3	96	73.306	ENSGGOG00000013496	CHD3	96	71.821	Gorilla_gorilla
ENSHCOG00000010170	chd3	96	72.681	ENSHGLG00000012017	CHD3	94	72.068	Heterocephalus_glaber_female
ENSHCOG00000010170	chd3	86	65.405	ENSHGLG00100013902	CHD3	94	63.839	Heterocephalus_glaber_male
ENSHCOG00000010170	chd3	80	92.357	ENSIPUG00000003271	chd3	93	82.474	Ictalurus_punctatus
ENSHCOG00000010170	chd3	96	73.157	ENSSTOG00000025907	CHD3	94	72.531	Ictidomys_tridecemlineatus
ENSHCOG00000010170	chd3	96	73.255	ENSJJAG00000017633	Chd3	95	72.563	Jaculus_jaculus
ENSHCOG00000010170	chd3	85	96.569	ENSKMAG00000019292	chd3	96	96.569	Kryptolebias_marmoratus
ENSHCOG00000010170	chd3	90	86.415	ENSLBEG00000028485	chd3	94	86.415	Labrus_bergylta
ENSHCOG00000010170	chd3	95	70.183	ENSLACG00000008031	CHD3	92	71.593	Latimeria_chalumnae
ENSHCOG00000010170	chd3	99	77.423	ENSLOCG00000013965	chd3	97	77.800	Lepisosteus_oculatus
ENSHCOG00000010170	chd3	95	71.355	ENSLAFG00000000572	CHD3	93	76.355	Loxodonta_africana
ENSHCOG00000010170	chd3	96	72.908	ENSMFAG00000020113	CHD3	96	72.340	Macaca_fascicularis
ENSHCOG00000010170	chd3	96	70.716	ENSMMUG00000022221	CHD3	93	71.260	Macaca_mulatta
ENSHCOG00000010170	chd3	96	72.959	ENSMNEG00000001728	CHD3	96	73.486	Macaca_nemestrina
ENSHCOG00000010170	chd3	96	72.959	ENSMLEG00000032249	CHD3	93	72.357	Mandrillus_leucophaeus
ENSHCOG00000010170	chd3	79	91.792	ENSMAMG00000000564	chd3	95	91.577	Mastacembelus_armatus
ENSHCOG00000010170	chd3	96	72.440	ENSMAUG00000013873	Chd3	96	71.746	Mesocricetus_auratus
ENSHCOG00000010170	chd3	96	73.499	ENSMICG00000008741	CHD3	93	70.806	Microcebus_murinus
ENSHCOG00000010170	chd3	96	72.389	ENSMOCG00000004848	Chd3	95	72.010	Microtus_ochrogaster
ENSHCOG00000010170	chd3	94	82.595	ENSMMOG00000012699	chd3	99	82.068	Mola_mola
ENSHCOG00000010170	chd3	90	73.920	ENSMODG00000007509	CHD3	96	73.756	Monodelphis_domestica
ENSHCOG00000010170	chd3	96	72.409	MGP_CAROLIEiJ_G0016564	Chd3	97	72.136	Mus_caroli
ENSHCOG00000010170	chd3	96	72.459	ENSMUSG00000018474	Chd3	97	72.136	Mus_musculus
ENSHCOG00000010170	chd3	96	73.089	MGP_PahariEiJ_G0017695	Chd3	97	72.586	Mus_pahari
ENSHCOG00000010170	chd3	96	72.510	MGP_SPRETEiJ_G0017400	Chd3	97	72.188	Mus_spretus
ENSHCOG00000010170	chd3	84	75.660	ENSMPUG00000008861	CHD3	96	75.323	Mustela_putorius_furo
ENSHCOG00000010170	chd3	96	73.204	ENSMLUG00000014643	-	93	72.563	Myotis_lucifugus
ENSHCOG00000010170	chd3	96	73.181	ENSNGAG00000000773	Chd3	93	72.746	Nannospalax_galili
ENSHCOG00000010170	chd3	86	82.471	ENSNBRG00000000636	chd3	97	82.989	Neolamprologus_brichardi
ENSHCOG00000010170	chd3	88	85.648	ENSNLEG00000009770	CHD3	95	73.308	Nomascus_leucogenys
ENSHCOG00000010170	chd3	82	77.004	ENSMEUG00000005852	CHD3	84	77.004	Notamacropus_eugenii
ENSHCOG00000010170	chd3	92	74.212	ENSOPRG00000011069	CHD3	96	73.572	Ochotona_princeps
ENSHCOG00000010170	chd3	96	73.065	ENSODEG00000017785	CHD3	94	72.385	Octodon_degus
ENSHCOG00000010170	chd3	95	85.573	ENSONIG00000009292	chd3	98	84.463	Oreochromis_niloticus
ENSHCOG00000010170	chd3	96	69.363	ENSOCUG00000029299	CHD3	95	68.967	Oryctolagus_cuniculus
ENSHCOG00000010170	chd3	78	84.818	ENSORLG00000007107	chd3	91	84.620	Oryzias_latipes
ENSHCOG00000010170	chd3	57	83.993	ENSORLG00020008387	chd3	95	84.609	Oryzias_latipes_hni
ENSHCOG00000010170	chd3	80	90.220	ENSOMEG00000013691	chd3	99	84.788	Oryzias_melastigma
ENSHCOG00000010170	chd3	96	73.398	ENSOGAG00000003216	CHD3	94	73.041	Otolemur_garnettii
ENSHCOG00000010170	chd3	96	72.191	ENSOARG00000017855	CHD3	93	71.599	Ovis_aries
ENSHCOG00000010170	chd3	96	72.093	ENSPPAG00000032886	CHD3	96	71.720	Pan_paniscus
ENSHCOG00000010170	chd3	96	73.116	ENSPPRG00000000626	CHD3	93	72.732	Panthera_pardus
ENSHCOG00000010170	chd3	96	73.357	ENSPTRG00000008714	CHD3	96	71.929	Pan_troglodytes
ENSHCOG00000010170	chd3	96	72.885	ENSPANG00000023938	CHD3	96	72.395	Papio_anubis
ENSHCOG00000010170	chd3	99	79.622	ENSPKIG00000006305	chd3	97	79.273	Paramormyrops_kingsleyae
ENSHCOG00000010170	chd3	55	78.214	ENSPSIG00000010177	CHD3	97	78.905	Pelodiscus_sinensis
ENSHCOG00000010170	chd3	96	72.824	ENSPEMG00000014262	Chd3	94	72.400	Peromyscus_maniculatus_bairdii
ENSHCOG00000010170	chd3	83	89.950	ENSPCIG00000005442	CHD3	95	85.232	Phascolarctos_cinereus
ENSHCOG00000010170	chd3	99	85.345	ENSPFOG00000012464	chd3	94	85.089	Poecilia_formosa
ENSHCOG00000010170	chd3	89	91.235	ENSPLAG00000002887	chd3	97	91.235	Poecilia_latipinna
ENSHCOG00000010170	chd3	55	87.414	ENSPMEG00000016725	chd3	95	83.433	Poecilia_mexicana
ENSHCOG00000010170	chd3	89	93.534	ENSPREG00000011044	chd3	96	87.548	Poecilia_reticulata
ENSHCOG00000010170	chd3	95	71.546	ENSPPYG00000007940	CHD3	95	70.346	Pongo_abelii
ENSHCOG00000010170	chd3	92	77.504	ENSPCAG00000004350	CHD3	91	77.554	Procavia_capensis
ENSHCOG00000010170	chd3	96	73.574	ENSPCOG00000020952	CHD3	93	72.976	Propithecus_coquereli
ENSHCOG00000010170	chd3	78	73.679	ENSPVAG00000016344	CHD3	78	73.523	Pteropus_vampyrus
ENSHCOG00000010170	chd3	99	79.853	ENSPNAG00000020393	chd3	97	87.549	Pygocentrus_nattereri
ENSHCOG00000010170	chd3	90	74.728	ENSRNOG00000009722	Chd3	96	74.169	Rattus_norvegicus
ENSHCOG00000010170	chd3	96	70.997	ENSRBIG00000033562	CHD3	96	71.914	Rhinopithecus_bieti
ENSHCOG00000010170	chd3	96	72.959	ENSRROG00000029554	CHD3	96	72.615	Rhinopithecus_roxellana
ENSHCOG00000010170	chd3	96	73.357	ENSSBOG00000020719	CHD3	96	73.923	Saimiri_boliviensis_boliviensis
ENSHCOG00000010170	chd3	96	72.607	ENSSHAG00000014412	CHD3	95	72.025	Sarcophilus_harrisii
ENSHCOG00000010170	chd3	80	86.293	ENSSFOG00015023123	chd3	94	79.873	Scleropages_formosus
ENSHCOG00000010170	chd3	90	86.608	ENSSMAG00000006451	chd3	97	93.158	Scophthalmus_maximus
ENSHCOG00000010170	chd3	55	83.394	ENSSDUG00000005792	chd3	96	84.664	Seriola_dumerili
ENSHCOG00000010170	chd3	97	87.172	ENSSPAG00000013694	chd3	99	92.553	Stegastes_partitus
ENSHCOG00000010170	chd3	96	73.633	ENSSSCG00000021363	CHD3	99	74.560	Sus_scrofa
ENSHCOG00000010170	chd3	82	81.582	ENSTRUG00000014990	chd3	97	81.303	Takifugu_rubripes
ENSHCOG00000010170	chd3	93	85.880	ENSTNIG00000012998	chd3	96	84.577	Tetraodon_nigroviridis
ENSHCOG00000010170	chd3	60	89.691	ENSTBEG00000011454	-	67	89.691	Tupaia_belangeri
ENSHCOG00000010170	chd3	93	77.128	ENSTTRG00000010295	CHD3	91	75.856	Tursiops_truncatus
ENSHCOG00000010170	chd3	83	88.837	ENSUAMG00000005475	CHD3	91	88.837	Ursus_americanus
ENSHCOG00000010170	chd3	51	91.304	ENSVPAG00000010794	-	61	92.593	Vicugna_pacos
ENSHCOG00000010170	chd3	96	72.843	ENSVVUG00000028011	CHD3	95	74.094	Vulpes_vulpes
ENSHCOG00000010170	chd3	95	67.623	ENSXETG00000012991	chd3	88	68.544	Xenopus_tropicalis
ENSHCOG00000010170	chd3	56	87.708	ENSXCOG00000000809	chd3	97	88.704	Xiphophorus_couchianus
ENSHCOG00000010170	chd3	80	91.803	ENSXMAG00000016035	chd3	99	91.803	Xiphophorus_maculatus