EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000010270 (Gene tree)
Gene ID: 109524752
Gene Symbol: snrnp70
Alias: U1 small ribonucleoprotein 70kd|snrp70|wu:fc20b04|zgc:136450
Full Name: small nuclear ribonucleoprotein U1 subunit 70
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 6224 bases
Position: chrKV880230.1:503914-510137
Accession: 109524752
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000022506	RRM_1	PF00076.22	2.8e-09	1	1
ENSHCOP00000022506	U1snRNP70_N	PF12220.8	6.5e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000000888	-	1365	XM_019884840	ENSHCOP00000022506	454 (aa)	XP_019740399	-

Gene Model

Click here to download ENSHCOG00000010270's gene model file

Pathways

Pathway ID	Pathway Name	Source
hcq03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000010270's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000010270	snrnp70	100	78.436	ENSACIG00000017909	snrnp70	100	78.224	Amphilophus_citrinellus
ENSHCOG00000010270	snrnp70	100	73.904	ENSACLG00000011144	snrnp70	100	74.792	Astatotilapia_calliptera
ENSHCOG00000010270	snrnp70	100	74.947	ENSHBUG00000018856	snrnp70	100	76.059	Haplochromis_burtoni
ENSHCOG00000010270	snrnp70	100	77.991	ENSKMAG00000005608	snrnp70	99	77.874	Kryptolebias_marmoratus
ENSHCOG00000010270	snrnp70	100	78.481	ENSMAMG00000004556	snrnp70	100	74.262	Mastacembelus_armatus
ENSHCOG00000010270	snrnp70	100	74.364	ENSMZEG00005022849	snrnp70	100	75.687	Maylandia_zebra
ENSHCOG00000010270	snrnp70	98	78.525	ENSMALG00000002275	snrnp70	88	79.556	Monopterus_albus
ENSHCOG00000010270	snrnp70	100	72.553	ENSOMEG00000013002	snrnp70	100	73.617	Oryzias_melastigma
ENSHCOG00000010270	snrnp70	56	77.652	ENSPPAG00000035067	SNRNP70	99	79.878	Pan_paniscus
ENSHCOG00000010270	snrnp70	55	67.424	ENSPSIG00000015251	SNRNP70	98	69.478	Pelodiscus_sinensis
ENSHCOG00000010270	snrnp70	100	73.617	ENSPLAG00000005912	snrnp70	100	71.915	Poecilia_latipinna
ENSHCOG00000010270	snrnp70	100	75.000	ENSPNYG00000003258	snrnp70	100	76.110	Pundamilia_nyererei
ENSHCOG00000010270	snrnp70	98	56.838	ENSSPUG00000016621	SNRNP70	52	85.586	Sphenodon_punctatus