EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000010276 (Gene tree)
Gene ID: 109508295
Gene Symbol: cth1
Alias: cb266|fa18c01|wu:fa18c01|zfcth1
Full Name: mRNA decay activator protein ZFP36L2-A-like
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 1886 bases
Position: chrKV880522.1:2269676-2271561
Accession: 109508295
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000008110	zf-CCCH	PF00642.24	2.1e-26	1	3
ENSHCOP00000008110	zf-CCCH	PF00642.24	2.1e-26	2	3
ENSHCOP00000008110	zf-CCCH	PF00642.24	2.1e-26	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000000869	-	1319	XM_019858192	ENSHCOP00000008110	275 (aa)	XP_019713751	UPI00094ED170

Gene Model

Click here to download ENSHCOG00000010276's gene model file

Pathways

Pathway ID	Pathway Name	Source
hcq04114	Oocyte meiosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000010276's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000010276	cth1	88	51.103	ENSAPOG00000012552	cth1	95	52.941	Acanthochromis_polyacanthus
ENSHCOG00000010276	cth1	85	51.866	ENSACIG00000016026	cth1	98	49.351	Amphilophus_citrinellus
ENSHCOG00000010276	cth1	99	52.104	ENSAOCG00000001644	cth1	99	54.369	Amphiprion_ocellaris
ENSHCOG00000010276	cth1	99	52.104	ENSAPEG00000008930	cth1	99	54.369	Amphiprion_percula
ENSHCOG00000010276	cth1	98	51.411	ENSATEG00000002281	cth1	95	52.351	Anabas_testudineus
ENSHCOG00000010276	cth1	88	51.880	ENSACLG00000015353	cth1	95	52.632	Astatotilapia_calliptera
ENSHCOG00000010276	cth1	95	48.734	ENSAMXG00000025717	cth1	97	48.734	Astyanax_mexicanus
ENSHCOG00000010276	cth1	77	55.508	ENSCSEG00000014617	cth1	99	52.038	Cynoglossus_semilaevis
ENSHCOG00000010276	cth1	99	50.169	ENSCVAG00000001680	cth1	65	49.831	Cyprinodon_variegatus
ENSHCOG00000010276	cth1	89	46.441	ENSDARG00000057328	cth1	95	51.148	Danio_rerio
ENSHCOG00000010276	cth1	97	47.368	ENSELUG00000012738	cth1	89	48.344	Esox_lucius
ENSHCOG00000010276	cth1	87	49.466	ENSFHEG00000022665	cth1	96	49.508	Fundulus_heteroclitus
ENSHCOG00000010276	cth1	88	52.692	ENSGMOG00000007360	cth1	95	53.929	Gadus_morhua
ENSHCOG00000010276	cth1	99	49.527	ENSGAFG00000019288	cth1	99	49.842	Gambusia_affinis
ENSHCOG00000010276	cth1	97	56.294	ENSGACG00000000802	cth1	97	56.294	Gasterosteus_aculeatus
ENSHCOG00000010276	cth1	97	52.759	ENSHBUG00000014400	cth1	97	53.448	Haplochromis_burtoni
ENSHCOG00000010276	cth1	99	49.842	ENSIPUG00000018040	cth1	98	49.842	Ictalurus_punctatus
ENSHCOG00000010276	cth1	89	52.536	ENSKMAG00000005944	cth1	99	54.181	Kryptolebias_marmoratus
ENSHCOG00000010276	cth1	99	53.185	ENSLBEG00000019253	cth1	99	54.459	Labrus_bergylta
ENSHCOG00000010276	cth1	73	51.269	ENSLOCG00000002047	cth1	97	51.269	Lepisosteus_oculatus
ENSHCOG00000010276	cth1	82	51.639	ENSMAMG00000001525	cth1	62	52.893	Mastacembelus_armatus
ENSHCOG00000010276	cth1	97	53.103	ENSMZEG00005022335	cth1	97	53.793	Maylandia_zebra
ENSHCOG00000010276	cth1	93	50.498	ENSMMOG00000020518	cth1	99	51.163	Mola_mola
ENSHCOG00000010276	cth1	82	52.049	ENSMALG00000020738	cth1	58	55.963	Monopterus_albus
ENSHCOG00000010276	cth1	86	53.846	ENSNBRG00000022789	cth1	86	54.878	Neolamprologus_brichardi
ENSHCOG00000010276	cth1	97	50.847	ENSONIG00000021318	cth1	97	51.864	Oreochromis_niloticus
ENSHCOG00000010276	cth1	99	49.000	ENSORLG00000022847	cth1	99	50.167	Oryzias_latipes
ENSHCOG00000010276	cth1	99	48.667	ENSORLG00020011979	cth1	99	49.498	Oryzias_latipes_hni
ENSHCOG00000010276	cth1	99	48.667	ENSORLG00015013084	cth1	99	50.167	Oryzias_latipes_hsok
ENSHCOG00000010276	cth1	88	50.943	ENSOMEG00000005809	cth1	78	52.453	Oryzias_melastigma
ENSHCOG00000010276	cth1	96	47.883	ENSPKIG00000015883	cth1	95	47.883	Paramormyrops_kingsleyae
ENSHCOG00000010276	cth1	98	50.311	ENSPMGG00000004275	cth1	99	51.242	Periophthalmus_magnuspinnatus
ENSHCOG00000010276	cth1	98	50.671	ENSPFOG00000013583	cth1	92	50.671	Poecilia_formosa
ENSHCOG00000010276	cth1	98	51.007	ENSPLAG00000018158	cth1	92	51.007	Poecilia_latipinna
ENSHCOG00000010276	cth1	98	50.671	ENSPMEG00000005744	cth1	98	50.671	Poecilia_mexicana
ENSHCOG00000010276	cth1	99	50.000	ENSPREG00000004099	cth1	99	50.667	Poecilia_reticulata
ENSHCOG00000010276	cth1	89	54.264	ENSPNYG00000016705	cth1	93	55.039	Pundamilia_nyererei
ENSHCOG00000010276	cth1	99	49.062	ENSPNAG00000013147	cth1	99	48.750	Pygocentrus_nattereri
ENSHCOG00000010276	cth1	84	47.970	ENSSFOG00015017190	cth1	59	57.609	Scleropages_formosus
ENSHCOG00000010276	cth1	99	50.779	ENSSMAG00000007977	cth1	99	53.560	Scophthalmus_maximus
ENSHCOG00000010276	cth1	99	50.000	ENSSDUG00000004321	cth1	99	51.829	Seriola_dumerili
ENSHCOG00000010276	cth1	99	50.152	ENSSLDG00000012760	cth1	99	51.976	Seriola_lalandi_dorsalis
ENSHCOG00000010276	cth1	98	49.846	ENSSLDG00000010023	-	98	51.692	Seriola_lalandi_dorsalis
ENSHCOG00000010276	cth1	98	49.846	ENSSLDG00000004516	-	98	51.692	Seriola_lalandi_dorsalis
ENSHCOG00000010276	cth1	78	56.410	ENSSPAG00000018659	cth1	98	51.768	Stegastes_partitus
ENSHCOG00000010276	cth1	99	51.429	ENSTRUG00000012770	cth1	99	52.698	Takifugu_rubripes
ENSHCOG00000010276	cth1	99	50.789	ENSTNIG00000000740	cth1	99	50.794	Tetraodon_nigroviridis
ENSHCOG00000010276	cth1	81	53.304	ENSXCOG00000003710	cth1	82	52.133	Xiphophorus_couchianus
ENSHCOG00000010276	cth1	99	48.553	ENSXMAG00000023885	cth1	99	48.562	Xiphophorus_maculatus