EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000010303 (Gene tree)
Gene ID: 109527655
Gene Symbol: rrp36
Alias: cb268|sb:cb268|si:dkey-236e20.6
Full Name: ribosomal RNA processing 36
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 4722 bases
Position: chrKV880311.1:209470-214191
Accession: 109527655
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000008114	RRP36	PF06102.12	1.7e-34	1	1
ENSHCOP00000022520	RRP36	PF06102.12	3e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000000850	-	1597	XM_019889684	ENSHCOP00000008114	268 (aa)	XP_019745243	-
ENSHCOT00000000865	-	636	-	ENSHCOP00000022520	211 (aa)	-	-

Gene Model

Click here to download ENSHCOG00000010303's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000010303's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000010303	rrp36	80	38.889	ENSG00000124541	RRP36	81	37.559	Homo_sapiens
ENSHCOG00000010303	rrp36	81	51.471	ENSAPOG00000022015	rrp36	76	51.471	Acanthochromis_polyacanthus
ENSHCOG00000010303	rrp36	83	47.664	ENSACIG00000020578	-	70	47.826	Amphilophus_citrinellus
ENSHCOG00000010303	rrp36	82	51.429	ENSAOCG00000013439	rrp36	65	51.429	Amphiprion_ocellaris
ENSHCOG00000010303	rrp36	82	51.429	ENSAPEG00000020996	rrp36	65	51.429	Amphiprion_percula
ENSHCOG00000010303	rrp36	83	47.664	ENSATEG00000016946	rrp36	63	47.664	Anabas_testudineus
ENSHCOG00000010303	rrp36	81	40.187	ENSANAG00000021773	RRP36	83	37.674	Aotus_nancymaae
ENSHCOG00000010303	rrp36	83	43.961	ENSACLG00000013982	RRP36	87	43.961	Astatotilapia_calliptera
ENSHCOG00000010303	rrp36	82	42.857	ENSACLG00000008408	rrp36	88	44.335	Astatotilapia_calliptera
ENSHCOG00000010303	rrp36	80	40.465	ENSBTAG00000053873	RRP36	86	38.498	Bos_taurus
ENSHCOG00000010303	rrp36	80	40.284	ENSCJAG00000004943	RRP36	82	37.736	Callithrix_jacchus
ENSHCOG00000010303	rrp36	82	40.359	ENSCAFG00020011057	RRP36	94	38.462	Canis_lupus_dingo
ENSHCOG00000010303	rrp36	91	31.739	ENSCHIG00000019781	-	92	31.878	Capra_hircus
ENSHCOG00000010303	rrp36	63	49.296	ENSCHIG00000003210	-	62	52.518	Capra_hircus
ENSHCOG00000010303	rrp36	92	40.083	ENSCHIG00000016354	-	94	37.917	Capra_hircus
ENSHCOG00000010303	rrp36	80	39.535	ENSTSYG00000037176	RRP36	83	37.559	Carlito_syrichta
ENSHCOG00000010303	rrp36	91	36.929	ENSCAPG00000010983	RRP36	98	37.179	Cavia_aperea
ENSHCOG00000010303	rrp36	81	38.813	ENSCPOG00000025932	RRP36	94	39.151	Cavia_porcellus
ENSHCOG00000010303	rrp36	80	40.094	ENSCCAG00000000048	RRP36	82	37.559	Cebus_capucinus
ENSHCOG00000010303	rrp36	89	38.197	ENSCATG00000041903	RRP36	89	36.364	Cercocebus_atys
ENSHCOG00000010303	rrp36	81	37.668	ENSCLAG00000013166	RRP36	94	38.318	Chinchilla_lanigera
ENSHCOG00000010303	rrp36	89	38.197	ENSCSAG00000011553	RRP36	89	36.364	Chlorocebus_sabaeus
ENSHCOG00000010303	rrp36	81	40.476	ENSCPBG00000003555	RRP36	58	38.679	Chrysemys_picta_bellii
ENSHCOG00000010303	rrp36	66	31.788	ENSCSAVG00000002672	-	63	35.862	Ciona_savignyi
ENSHCOG00000010303	rrp36	80	40.000	ENSCANG00000035127	RRP36	83	38.028	Colobus_angolensis_palliatus
ENSHCOG00000010303	rrp36	80	39.151	ENSCGRG00001021461	Rrp36	92	37.143	Cricetulus_griseus_chok1gshd
ENSHCOG00000010303	rrp36	80	39.151	ENSCGRG00000006286	Rrp36	92	37.143	Cricetulus_griseus_crigri
ENSHCOG00000010303	rrp36	82	45.070	ENSCSEG00000001039	RRP36	64	45.714	Cynoglossus_semilaevis
ENSHCOG00000010303	rrp36	87	44.292	ENSCVAG00000017798	rrp36	99	44.292	Cyprinodon_variegatus
ENSHCOG00000010303	rrp36	82	41.038	ENSDARG00000032516	rrp36	66	39.623	Danio_rerio
ENSHCOG00000010303	rrp36	87	38.839	ENSDORG00000012186	Rrp36	96	37.668	Dipodomys_ordii
ENSHCOG00000010303	rrp36	51	34.043	FBgn0038235	CG8461	57	31.884	Drosophila_melanogaster
ENSHCOG00000010303	rrp36	80	39.720	ENSEASG00005003169	RRP36	92	37.264	Equus_asinus_asinus
ENSHCOG00000010303	rrp36	80	39.720	ENSECAG00000040238	RRP36	92	37.264	Equus_caballus
ENSHCOG00000010303	rrp36	97	32.400	ENSEEUG00000010515	RRP36	99	32.400	Erinaceus_europaeus
ENSHCOG00000010303	rrp36	83	46.047	ENSELUG00000016840	rrp36	60	45.581	Esox_lucius
ENSHCOG00000010303	rrp36	90	37.872	ENSFCAG00000043818	RRP36	90	35.622	Felis_catus
ENSHCOG00000010303	rrp36	80	39.336	ENSFDAG00000010380	RRP36	98	37.559	Fukomys_damarensis
ENSHCOG00000010303	rrp36	65	50.000	ENSFHEG00000000761	rrp36	72	57.343	Fundulus_heteroclitus
ENSHCOG00000010303	rrp36	82	45.498	ENSGAFG00000017817	rrp36	60	44.076	Gambusia_affinis
ENSHCOG00000010303	rrp36	82	45.540	ENSGACG00000019603	RRP36	65	47.418	Gasterosteus_aculeatus
ENSHCOG00000010303	rrp36	89	37.768	ENSGGOG00000037384	RRP36	91	35.931	Gorilla_gorilla
ENSHCOG00000010303	rrp36	82	45.714	ENSHBUG00000008974	RRP36	65	44.762	Haplochromis_burtoni
ENSHCOG00000010303	rrp36	85	37.611	ENSHGLG00000018082	RRP36	89	35.965	Heterocephalus_glaber_female
ENSHCOG00000010303	rrp36	85	37.611	ENSHGLG00100019303	RRP36	89	35.965	Heterocephalus_glaber_male
ENSHCOG00000010303	rrp36	80	38.647	ENSIPUG00000016548	rrp36	69	39.614	Ictalurus_punctatus
ENSHCOG00000010303	rrp36	89	38.298	ENSSTOG00000009511	RRP36	98	36.638	Ictidomys_tridecemlineatus
ENSHCOG00000010303	rrp36	81	42.056	ENSJJAG00000023363	Rrp36	93	40.000	Jaculus_jaculus
ENSHCOG00000010303	rrp36	82	46.190	ENSKMAG00000006968	rrp36	61	46.190	Kryptolebias_marmoratus
ENSHCOG00000010303	rrp36	83	40.741	ENSLBEG00000017728	-	66	41.152	Labrus_bergylta
ENSHCOG00000010303	rrp36	89	39.381	ENSLACG00000001888	rrp36	71	39.381	Latimeria_chalumnae
ENSHCOG00000010303	rrp36	82	40.376	ENSLOCG00000015862	RRP36	60	39.906	Lepisosteus_oculatus
ENSHCOG00000010303	rrp36	79	42.180	ENSLAFG00000032704	RRP36	97	40.284	Loxodonta_africana
ENSHCOG00000010303	rrp36	89	38.197	ENSMFAG00000003547	RRP36	89	36.364	Macaca_fascicularis
ENSHCOG00000010303	rrp36	89	37.768	ENSMNEG00000044747	RRP36	89	35.931	Macaca_nemestrina
ENSHCOG00000010303	rrp36	89	38.197	ENSMLEG00000034272	RRP36	89	36.364	Mandrillus_leucophaeus
ENSHCOG00000010303	rrp36	81	48.558	ENSMAMG00000019157	-	57	47.596	Mastacembelus_armatus
ENSHCOG00000010303	rrp36	82	46.190	ENSMZEG00005015204	RRP36	65	45.238	Maylandia_zebra
ENSHCOG00000010303	rrp36	80	39.336	ENSMAUG00000003648	Rrp36	93	37.321	Mesocricetus_auratus
ENSHCOG00000010303	rrp36	80	38.140	ENSMICG00000045230	RRP36	83	36.150	Microcebus_murinus
ENSHCOG00000010303	rrp36	87	38.839	ENSMOCG00000002009	Rrp36	92	38.462	Microtus_ochrogaster
ENSHCOG00000010303	rrp36	82	48.558	ENSMMOG00000018637	-	64	48.077	Mola_mola
ENSHCOG00000010303	rrp36	82	48.571	ENSMALG00000008142	-	67	47.619	Monopterus_albus
ENSHCOG00000010303	rrp36	63	46.853	MGP_CAROLIEiJ_G0021680	Rrp36	57	51.079	Mus_caroli
ENSHCOG00000010303	rrp36	81	37.850	ENSMUSG00000023971	Rrp36	92	36.667	Mus_musculus
ENSHCOG00000010303	rrp36	80	39.906	MGP_PahariEiJ_G0020671	Rrp36	92	37.915	Mus_pahari
ENSHCOG00000010303	rrp36	81	37.850	MGP_SPRETEiJ_G0022592	Rrp36	85	36.667	Mus_spretus
ENSHCOG00000010303	rrp36	80	40.000	ENSNLEG00000033289	RRP36	98	38.498	Nomascus_leucogenys
ENSHCOG00000010303	rrp36	62	37.879	ENSMEUG00000007149	-	82	42.647	Notamacropus_eugenii
ENSHCOG00000010303	rrp36	63	48.201	ENSOPRG00000002274	RRP36	56	51.449	Ochotona_princeps
ENSHCOG00000010303	rrp36	80	39.623	ENSODEG00000015915	RRP36	93	38.967	Octodon_degus
ENSHCOG00000010303	rrp36	82	47.143	ENSONIG00000015983	rrp36	67	46.445	Oreochromis_niloticus
ENSHCOG00000010303	rrp36	81	45.455	ENSORLG00000029500	rrp36	62	46.445	Oryzias_latipes
ENSHCOG00000010303	rrp36	82	44.811	ENSORLG00020017452	-	62	46.226	Oryzias_latipes_hni
ENSHCOG00000010303	rrp36	81	45.192	ENSORLG00015016898	rrp36	62	46.190	Oryzias_latipes_hsok
ENSHCOG00000010303	rrp36	81	45.411	ENSOMEG00000008623	RRP36	63	45.894	Oryzias_melastigma
ENSHCOG00000010303	rrp36	81	38.498	ENSOGAG00000012699	RRP36	92	35.514	Otolemur_garnettii
ENSHCOG00000010303	rrp36	93	33.624	ENSPPAG00000042831	-	96	31.897	Pan_paniscus
ENSHCOG00000010303	rrp36	89	37.768	ENSPPRG00000014610	RRP36	90	35.931	Panthera_pardus
ENSHCOG00000010303	rrp36	89	37.768	ENSPTIG00000010853	RRP36	90	35.931	Panthera_tigris_altaica
ENSHCOG00000010303	rrp36	80	40.000	ENSPTRG00000018184	RRP36	81	38.028	Pan_troglodytes
ENSHCOG00000010303	rrp36	89	38.197	ENSPANG00000025140	RRP36	89	36.364	Papio_anubis
ENSHCOG00000010303	rrp36	83	43.458	ENSPKIG00000004303	rrp36	63	43.458	Paramormyrops_kingsleyae
ENSHCOG00000010303	rrp36	86	43.519	ENSPMGG00000016870	rrp36	70	43.519	Periophthalmus_magnuspinnatus
ENSHCOG00000010303	rrp36	80	39.151	ENSPEMG00000007015	Rrp36	92	37.619	Peromyscus_maniculatus_bairdii
ENSHCOG00000010303	rrp36	89	37.069	ENSPCIG00000009179	RRP36	91	35.714	Phascolarctos_cinereus
ENSHCOG00000010303	rrp36	82	46.667	ENSPFOG00000011959	rrp36	55	46.667	Poecilia_formosa
ENSHCOG00000010303	rrp36	82	46.667	ENSPLAG00000023901	rrp36	60	46.667	Poecilia_latipinna
ENSHCOG00000010303	rrp36	82	46.190	ENSPMEG00000024099	rrp36	59	46.190	Poecilia_mexicana
ENSHCOG00000010303	rrp36	82	45.238	ENSPREG00000022787	rrp36	60	43.810	Poecilia_reticulata
ENSHCOG00000010303	rrp36	87	38.261	ENSPPYG00000016628	RRP36	85	37.387	Pongo_abelii
ENSHCOG00000010303	rrp36	80	39.070	ENSPCOG00000018401	RRP36	84	37.089	Propithecus_coquereli
ENSHCOG00000010303	rrp36	85	36.842	ENSPVAG00000008714	RRP36	91	35.398	Pteropus_vampyrus
ENSHCOG00000010303	rrp36	82	46.190	ENSPNYG00000018030	RRP36	65	45.238	Pundamilia_nyererei
ENSHCOG00000010303	rrp36	82	41.981	ENSPNAG00000027207	rrp36	60	41.981	Pygocentrus_nattereri
ENSHCOG00000010303	rrp36	81	38.785	ENSRNOG00000017836	Rrp36	86	36.792	Rattus_norvegicus
ENSHCOG00000010303	rrp36	80	40.000	ENSRBIG00000040019	RRP36	82	38.028	Rhinopithecus_bieti
ENSHCOG00000010303	rrp36	80	40.000	ENSRROG00000040721	RRP36	82	38.028	Rhinopithecus_roxellana
ENSHCOG00000010303	rrp36	80	39.535	ENSSBOG00000030228	RRP36	84	37.559	Saimiri_boliviensis_boliviensis
ENSHCOG00000010303	rrp36	81	43.602	ENSSFOG00015023058	rrp36	63	43.333	Scleropages_formosus
ENSHCOG00000010303	rrp36	82	49.048	ENSSMAG00000020911	-	58	49.048	Scophthalmus_maximus
ENSHCOG00000010303	rrp36	82	49.524	ENSSDUG00000018924	rrp36	58	48.571	Seriola_dumerili
ENSHCOG00000010303	rrp36	87	50.704	ENSSLDG00000019741	RRP36	97	49.029	Seriola_lalandi_dorsalis
ENSHCOG00000010303	rrp36	80	38.967	ENSSARG00000000873	RRP36	98	37.441	Sorex_araneus
ENSHCOG00000010303	rrp36	81	39.151	ENSSPUG00000000213	RRP36	58	38.679	Sphenodon_punctatus
ENSHCOG00000010303	rrp36	81	50.000	ENSSPAG00000017154	rrp36	75	46.154	Stegastes_partitus
ENSHCOG00000010303	rrp36	80	40.654	ENSSSCG00000001656	RRP36	84	38.679	Sus_scrofa
ENSHCOG00000010303	rrp36	83	45.327	ENSTRUG00000021893	rrp36	65	43.458	Takifugu_rubripes
ENSHCOG00000010303	rrp36	85	48.214	ENSTNIG00000004741	rrp36	87	47.887	Tetraodon_nigroviridis
ENSHCOG00000010303	rrp36	80	31.628	ENSTBEG00000012326	RRP36	98	30.047	Tupaia_belangeri
ENSHCOG00000010303	rrp36	80	38.532	ENSTTRG00000007001	RRP36	85	38.756	Tursiops_truncatus
ENSHCOG00000010303	rrp36	80	38.426	ENSUAMG00000015865	RRP36	86	36.620	Ursus_americanus
ENSHCOG00000010303	rrp36	63	48.611	ENSUMAG00000008726	RRP36	85	52.518	Ursus_maritimus
ENSHCOG00000010303	rrp36	80	39.070	ENSVPAG00000008904	RRP36	98	36.620	Vicugna_pacos
ENSHCOG00000010303	rrp36	82	40.359	ENSVVUG00000027816	RRP36	94	38.462	Vulpes_vulpes
ENSHCOG00000010303	rrp36	86	45.411	ENSXCOG00000011238	rrp36	95	44.928	Xiphophorus_couchianus