EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000010306 (Gene tree)
Gene ID: 109518148
Gene Symbol: pum3
Alias: cb379|im:7148292|puf-A|sb:cb379|si:ch211-241o7.5
Full Name: pumilio RNA binding family member 3
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 6013 bases
Position: chrKV880022.1:52014-58026
Accession: 109518148
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000008127	CPL	PF08144.11	1.5e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000000842	-	2639	XM_019873820	ENSHCOP00000008127	664 (aa)	XP_019729379	UPI00094E9AAA

Gene Model

Click here to download ENSHCOG00000010306's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000010306's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000010306	pum3	99	55.111	ENSG00000080608	PUM3	91	59.106	Homo_sapiens
ENSHCOG00000010306	pum3	100	73.630	ENSAPOG00000020252	pum3	100	72.741	Acanthochromis_polyacanthus
ENSHCOG00000010306	pum3	92	56.800	ENSAMEG00000012187	PUM3	91	58.347	Ailuropoda_melanoleuca
ENSHCOG00000010306	pum3	85	73.158	ENSACIG00000009786	pum3	94	73.239	Amphilophus_citrinellus
ENSHCOG00000010306	pum3	100	74.815	ENSAOCG00000004439	pum3	100	73.778	Amphiprion_ocellaris
ENSHCOG00000010306	pum3	100	74.963	ENSAPEG00000020523	pum3	100	73.926	Amphiprion_percula
ENSHCOG00000010306	pum3	99	75.785	ENSATEG00000005799	pum3	96	76.947	Anabas_testudineus
ENSHCOG00000010306	pum3	87	57.166	ENSAPLG00000002920	PUM3	99	56.381	Anas_platyrhynchos
ENSHCOG00000010306	pum3	83	55.594	ENSACAG00000003174	PUM3	98	54.758	Anolis_carolinensis
ENSHCOG00000010306	pum3	99	55.325	ENSANAG00000024520	PUM3	92	58.756	Aotus_nancymaae
ENSHCOG00000010306	pum3	100	73.025	ENSACLG00000001017	pum3	100	72.280	Astatotilapia_calliptera
ENSHCOG00000010306	pum3	99	62.575	ENSAMXG00000020911	pum3	95	62.677	Astyanax_mexicanus
ENSHCOG00000010306	pum3	93	56.140	ENSBTAG00000013357	PUM3	91	57.781	Bos_taurus
ENSHCOG00000010306	pum3	77	31.985	WBGene00014165	puf-12	67	31.985	Caenorhabditis_elegans
ENSHCOG00000010306	pum3	99	54.776	ENSCJAG00000010917	PUM3	91	58.678	Callithrix_jacchus
ENSHCOG00000010306	pum3	90	58.017	ENSCAFG00000002035	PUM3	90	58.182	Canis_familiaris
ENSHCOG00000010306	pum3	90	58.017	ENSCAFG00020026867	PUM3	90	58.182	Canis_lupus_dingo
ENSHCOG00000010306	pum3	93	56.938	ENSCHIG00000021559	PUM3	91	58.609	Capra_hircus
ENSHCOG00000010306	pum3	99	54.154	ENSTSYG00000007481	PUM3	92	57.026	Carlito_syrichta
ENSHCOG00000010306	pum3	94	55.468	ENSCAPG00000010592	-	91	56.931	Cavia_aperea
ENSHCOG00000010306	pum3	94	56.804	ENSCPOG00000008552	-	91	58.347	Cavia_porcellus
ENSHCOG00000010306	pum3	99	54.532	ENSCCAG00000032650	PUM3	92	58.101	Cebus_capucinus
ENSHCOG00000010306	pum3	99	55.030	ENSCATG00000024880	PUM3	92	58.361	Cercocebus_atys
ENSHCOG00000010306	pum3	89	55.418	ENSCLAG00000011892	PUM3	91	59.008	Chinchilla_lanigera
ENSHCOG00000010306	pum3	99	54.896	ENSCSAG00000008691	PUM3	92	58.429	Chlorocebus_sabaeus
ENSHCOG00000010306	pum3	87	45.396	ENSCHOG00000002535	PUM3	74	51.800	Choloepus_hoffmanni
ENSHCOG00000010306	pum3	96	53.731	ENSCPBG00000025470	PUM3	94	55.573	Chrysemys_picta_bellii
ENSHCOG00000010306	pum3	80	39.091	ENSCING00000024199	-	94	39.326	Ciona_intestinalis
ENSHCOG00000010306	pum3	89	38.779	ENSCSAVG00000006072	-	99	39.238	Ciona_savignyi
ENSHCOG00000010306	pum3	99	55.622	ENSCANG00000006142	PUM3	92	58.592	Colobus_angolensis_palliatus
ENSHCOG00000010306	pum3	99	54.599	ENSCGRG00001016402	Pum3	92	57.938	Cricetulus_griseus_chok1gshd
ENSHCOG00000010306	pum3	99	54.599	ENSCGRG00000010207	Pum3	92	57.938	Cricetulus_griseus_crigri
ENSHCOG00000010306	pum3	89	70.909	ENSCSEG00000001565	pum3	99	69.852	Cynoglossus_semilaevis
ENSHCOG00000010306	pum3	72	68.182	ENSCVAG00000006550	pum3	100	68.182	Cyprinodon_variegatus
ENSHCOG00000010306	pum3	99	61.469	ENSDARG00000087779	pum3	99	61.111	Danio_rerio
ENSHCOG00000010306	pum3	99	47.400	ENSDNOG00000008157	PUM3	64	49.427	Dasypus_novemcinctus
ENSHCOG00000010306	pum3	79	61.407	ENSETEG00000015331	PUM3	83	61.183	Echinops_telfairi
ENSHCOG00000010306	pum3	77	39.544	ENSEBUG00000011586	pum3	80	39.154	Eptatretus_burgeri
ENSHCOG00000010306	pum3	87	56.431	ENSEASG00005010350	PUM3	91	58.843	Equus_asinus_asinus
ENSHCOG00000010306	pum3	87	56.431	ENSECAG00000017193	PUM3	92	58.429	Equus_caballus
ENSHCOG00000010306	pum3	73	55.165	ENSEEUG00000010314	PUM3	89	52.174	Erinaceus_europaeus
ENSHCOG00000010306	pum3	99	61.029	ENSELUG00000002215	pum3	94	62.150	Esox_lucius
ENSHCOG00000010306	pum3	91	56.786	ENSFALG00000010509	PUM3	99	55.869	Ficedula_albicollis
ENSHCOG00000010306	pum3	99	55.522	ENSFDAG00000021027	PUM3	90	59.076	Fukomys_damarensis
ENSHCOG00000010306	pum3	99	76.099	ENSFHEG00000015576	pum3	100	76.099	Fundulus_heteroclitus
ENSHCOG00000010306	pum3	81	70.295	ENSGMOG00000014217	pum3	100	70.295	Gadus_morhua
ENSHCOG00000010306	pum3	79	61.977	ENSGALG00000010178	PUM3	87	60.612	Gallus_gallus
ENSHCOG00000010306	pum3	54	74.451	ENSGAFG00000001930	pum3	62	74.451	Gambusia_affinis
ENSHCOG00000010306	pum3	81	80.479	ENSGACG00000017878	pum3	99	80.479	Gasterosteus_aculeatus
ENSHCOG00000010306	pum3	91	55.450	ENSGAGG00000018983	PUM3	99	55.276	Gopherus_agassizii
ENSHCOG00000010306	pum3	99	55.178	ENSGGOG00000006143	PUM3	91	59.174	Gorilla_gorilla
ENSHCOG00000010306	pum3	100	61.169	ENSHBUG00000012903	pum3	97	60.479	Haplochromis_burtoni
ENSHCOG00000010306	pum3	99	55.310	ENSHGLG00000015868	-	89	59.696	Heterocephalus_glaber_female
ENSHCOG00000010306	pum3	99	55.310	ENSHGLG00100018825	PUM3	89	59.696	Heterocephalus_glaber_male
ENSHCOG00000010306	pum3	99	60.837	ENSIPUG00000024801	pum3	99	60.954	Ictalurus_punctatus
ENSHCOG00000010306	pum3	99	56.119	ENSSTOG00000009586	PUM3	91	59.468	Ictidomys_tridecemlineatus
ENSHCOG00000010306	pum3	88	58.010	ENSJJAG00000012563	Pum3	89	58.010	Jaculus_jaculus
ENSHCOG00000010306	pum3	100	72.197	ENSKMAG00000010277	pum3	100	70.808	Kryptolebias_marmoratus
ENSHCOG00000010306	pum3	100	73.661	ENSLBEG00000012213	pum3	100	72.929	Labrus_bergylta
ENSHCOG00000010306	pum3	92	54.219	ENSLACG00000008312	PUM3	99	54.389	Latimeria_chalumnae
ENSHCOG00000010306	pum3	100	59.403	ENSLOCG00000012529	pum3	92	62.098	Lepisosteus_oculatus
ENSHCOG00000010306	pum3	94	57.006	ENSLAFG00000017341	PUM3	89	59.359	Loxodonta_africana
ENSHCOG00000010306	pum3	99	54.896	ENSMFAG00000001430	PUM3	92	58.429	Macaca_fascicularis
ENSHCOG00000010306	pum3	99	54.896	ENSMMUG00000002362	PUM3	91	58.429	Macaca_mulatta
ENSHCOG00000010306	pum3	99	54.896	ENSMNEG00000035288	PUM3	92	58.429	Macaca_nemestrina
ENSHCOG00000010306	pum3	99	54.896	ENSMLEG00000034820	PUM3	92	58.429	Mandrillus_leucophaeus
ENSHCOG00000010306	pum3	100	74.627	ENSMAMG00000022861	pum3	100	71.593	Mastacembelus_armatus
ENSHCOG00000010306	pum3	100	72.795	ENSMZEG00005014205	pum3	97	72.131	Maylandia_zebra
ENSHCOG00000010306	pum3	83	52.878	ENSMGAG00000002255	PUM3	86	56.619	Meleagris_gallopavo
ENSHCOG00000010306	pum3	99	54.328	ENSMAUG00000009733	Pum3	99	54.586	Mesocricetus_auratus
ENSHCOG00000010306	pum3	99	53.858	ENSMICG00000045916	PUM3	79	57.851	Microcebus_murinus
ENSHCOG00000010306	pum3	99	54.925	ENSMOCG00000019519	-	92	57.774	Microtus_ochrogaster
ENSHCOG00000010306	pum3	91	55.791	ENSMOCG00000014830	-	94	55.791	Microtus_ochrogaster
ENSHCOG00000010306	pum3	95	69.592	ENSMMOG00000012184	pum3	98	69.327	Mola_mola
ENSHCOG00000010306	pum3	79	60.381	ENSMODG00000015417	PUM3	74	60.225	Monodelphis_domestica
ENSHCOG00000010306	pum3	100	75.893	ENSMALG00000022164	pum3	87	81.942	Monopterus_albus
ENSHCOG00000010306	pum3	96	55.725	MGP_CAROLIEiJ_G0022845	Pum3	92	58.238	Mus_caroli
ENSHCOG00000010306	pum3	96	55.267	ENSMUSG00000041360	Pum3	92	57.749	Mus_musculus
ENSHCOG00000010306	pum3	99	54.519	MGP_PahariEiJ_G0014338	Pum3	92	57.561	Mus_pahari
ENSHCOG00000010306	pum3	96	55.420	MGP_SPRETEiJ_G0023763	Pum3	92	57.912	Mus_spretus
ENSHCOG00000010306	pum3	90	56.814	ENSMPUG00000005125	PUM3	91	57.355	Mustela_putorius_furo
ENSHCOG00000010306	pum3	99	53.858	ENSMLUG00000002309	PUM3	92	57.283	Myotis_lucifugus
ENSHCOG00000010306	pum3	79	59.583	ENSNGAG00000019468	Pum3	91	55.848	Nannospalax_galili
ENSHCOG00000010306	pum3	97	65.581	ENSNBRG00000021370	pum3	95	65.581	Neolamprologus_brichardi
ENSHCOG00000010306	pum3	99	55.193	ENSNLEG00000008712	PUM3	92	58.756	Nomascus_leucogenys
ENSHCOG00000010306	pum3	73	43.852	ENSMEUG00000013606	-	98	44.200	Notamacropus_eugenii
ENSHCOG00000010306	pum3	53	52.000	ENSOPRG00000004225	-	55	52.055	Ochotona_princeps
ENSHCOG00000010306	pum3	79	62.619	ENSODEG00000003625	-	90	58.621	Octodon_degus
ENSHCOG00000010306	pum3	88	53.454	ENSODEG00000016477	-	90	53.630	Octodon_degus
ENSHCOG00000010306	pum3	100	73.025	ENSONIG00000012733	pum3	100	72.280	Oreochromis_niloticus
ENSHCOG00000010306	pum3	79	58.824	ENSOANG00000014995	PUM3	98	58.672	Ornithorhynchus_anatinus
ENSHCOG00000010306	pum3	99	54.260	ENSOCUG00000004189	-	91	58.086	Oryctolagus_cuniculus
ENSHCOG00000010306	pum3	95	55.194	ENSOCUG00000026104	-	91	58.086	Oryctolagus_cuniculus
ENSHCOG00000010306	pum3	100	69.185	ENSORLG00000014935	pum3	100	69.311	Oryzias_latipes
ENSHCOG00000010306	pum3	100	69.037	ENSORLG00020002841	pum3	100	69.162	Oryzias_latipes_hni
ENSHCOG00000010306	pum3	100	69.851	ENSORLG00015015906	pum3	100	69.012	Oryzias_latipes_hsok
ENSHCOG00000010306	pum3	100	67.761	ENSOMEG00000009427	pum3	100	66.617	Oryzias_melastigma
ENSHCOG00000010306	pum3	77	45.648	ENSOGAG00000033481	-	90	43.543	Otolemur_garnettii
ENSHCOG00000010306	pum3	88	58.983	ENSOGAG00000008125	-	91	58.775	Otolemur_garnettii
ENSHCOG00000010306	pum3	93	57.143	ENSOARG00000013337	PUM3	91	58.541	Ovis_aries
ENSHCOG00000010306	pum3	99	55.178	ENSPPAG00000041337	PUM3	91	59.174	Pan_paniscus
ENSHCOG00000010306	pum3	79	61.787	ENSPPRG00000000809	PUM3	91	57.851	Panthera_pardus
ENSHCOG00000010306	pum3	79	62.357	ENSPTIG00000021934	PUM3	91	58.347	Panthera_tigris_altaica
ENSHCOG00000010306	pum3	99	55.325	ENSPTRG00000020735	PUM3	91	59.339	Pan_troglodytes
ENSHCOG00000010306	pum3	99	54.896	ENSPANG00000025118	PUM3	92	58.429	Papio_anubis
ENSHCOG00000010306	pum3	100	60.448	ENSPKIG00000022249	pum3	98	61.020	Paramormyrops_kingsleyae
ENSHCOG00000010306	pum3	92	56.250	ENSPSIG00000016272	PUM3	99	55.887	Pelodiscus_sinensis
ENSHCOG00000010306	pum3	74	74.343	ENSPMGG00000021261	pum3	99	74.545	Periophthalmus_magnuspinnatus
ENSHCOG00000010306	pum3	97	45.441	ENSPEMG00000019340	-	91	46.809	Peromyscus_maniculatus_bairdii
ENSHCOG00000010306	pum3	81	60.000	ENSPCIG00000030598	PUM3	72	60.000	Phascolarctos_cinereus
ENSHCOG00000010306	pum3	100	64.873	ENSPFOG00000001719	pum3	94	71.379	Poecilia_formosa
ENSHCOG00000010306	pum3	100	67.265	ENSPLAG00000020010	pum3	100	66.667	Poecilia_latipinna
ENSHCOG00000010306	pum3	100	67.265	ENSPMEG00000017451	pum3	100	66.069	Poecilia_mexicana
ENSHCOG00000010306	pum3	66	59.498	ENSPREG00000019478	-	76	59.498	Poecilia_reticulata
ENSHCOG00000010306	pum3	99	55.473	ENSPPYG00000019255	PUM3	91	59.504	Pongo_abelii
ENSHCOG00000010306	pum3	88	51.071	ENSPCAG00000005797	PUM3	88	51.555	Procavia_capensis
ENSHCOG00000010306	pum3	99	54.154	ENSPCOG00000027325	PUM3	91	58.347	Propithecus_coquereli
ENSHCOG00000010306	pum3	99	54.873	ENSPVAG00000016135	PUM3	86	58.472	Pteropus_vampyrus
ENSHCOG00000010306	pum3	100	73.163	ENSPNYG00000016124	pum3	100	72.496	Pundamilia_nyererei
ENSHCOG00000010306	pum3	99	59.403	ENSPNAG00000026524	pum3	96	60.188	Pygocentrus_nattereri
ENSHCOG00000010306	pum3	96	56.000	ENSRNOG00000012574	Pum3	92	58.401	Rattus_norvegicus
ENSHCOG00000010306	pum3	96	55.692	ENSRNOG00000048356	RGD1308750	92	57.912	Rattus_norvegicus
ENSHCOG00000010306	pum3	99	55.075	ENSRBIG00000036924	PUM3	92	58.238	Rhinopithecus_bieti
ENSHCOG00000010306	pum3	99	55.224	ENSRROG00000041089	PUM3	92	58.401	Rhinopithecus_roxellana
ENSHCOG00000010306	pum3	99	54.451	ENSSBOG00000028066	PUM3	92	58.101	Saimiri_boliviensis_boliviensis
ENSHCOG00000010306	pum3	99	51.172	ENSSHAG00000003730	PUM3	83	60.185	Sarcophilus_harrisii
ENSHCOG00000010306	pum3	99	60.386	ENSSFOG00015018778	pum3	95	59.938	Scleropages_formosus
ENSHCOG00000010306	pum3	84	81.495	ENSSMAG00000013236	pum3	99	74.814	Scophthalmus_maximus
ENSHCOG00000010306	pum3	100	76.867	ENSSDUG00000001887	pum3	99	76.754	Seriola_dumerili
ENSHCOG00000010306	pum3	100	77.926	ENSSLDG00000015766	pum3	99	77.663	Seriola_lalandi_dorsalis
ENSHCOG00000010306	pum3	90	52.979	ENSSARG00000000579	PUM3	87	57.934	Sorex_araneus
ENSHCOG00000010306	pum3	98	54.559	ENSSPUG00000001707	PUM3	84	60.038	Sphenodon_punctatus
ENSHCOG00000010306	pum3	100	73.472	ENSSPAG00000003976	pum3	100	72.957	Stegastes_partitus
ENSHCOG00000010306	pum3	93	56.508	ENSSSCG00000005227	PUM3	98	55.416	Sus_scrofa
ENSHCOG00000010306	pum3	98	55.303	ENSTGUG00000005339	PUM3	99	55.836	Taeniopygia_guttata
ENSHCOG00000010306	pum3	100	73.512	ENSTRUG00000004074	pum3	99	72.378	Takifugu_rubripes
ENSHCOG00000010306	pum3	99	70.633	ENSTNIG00000010325	pum3	98	70.934	Tetraodon_nigroviridis
ENSHCOG00000010306	pum3	79	45.833	ENSTBEG00000013058	PUM3	83	46.041	Tupaia_belangeri
ENSHCOG00000010306	pum3	93	52.077	ENSTTRG00000001062	PUM3	87	53.465	Tursiops_truncatus
ENSHCOG00000010306	pum3	92	51.840	ENSUMAG00000018443	PUM3	99	58.113	Ursus_maritimus
ENSHCOG00000010306	pum3	99	54.694	ENSVPAG00000010766	PUM3	90	58.706	Vicugna_pacos
ENSHCOG00000010306	pum3	90	58.182	ENSVVUG00000006527	PUM3	90	58.347	Vulpes_vulpes
ENSHCOG00000010306	pum3	92	47.106	ENSXETG00000011707	pum3	94	48.264	Xenopus_tropicalis
ENSHCOG00000010306	pum3	95	65.039	ENSXCOG00000006725	pum3	100	64.724	Xiphophorus_couchianus
ENSHCOG00000010306	pum3	100	66.218	ENSXMAG00000002926	pum3	100	65.770	Xiphophorus_maculatus