EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000010349 (Gene tree)
Gene ID: 109515076
Gene Symbol: rbm4.3 (1 of many)
Alias: fb55c03|fb78a04|fj36h04|wu:fb55c03|wu:fb78a04|wu:fj36h04|zgc:56141|zgc:77000
Full Name: RNA-binding protein 4.1-like
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 1734 bases
Position: chrKV879891.1:56719-58452
Accession: 109515076
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000022554	RRM_5	PF13893.6	3.3e-10	1	2
ENSHCOP00000022554	RRM_5	PF13893.6	3.3e-10	2	2
ENSHCOP00000022554	RRM_1	PF00076.22	5.5e-29	1	2
ENSHCOP00000022554	RRM_1	PF00076.22	5.5e-29	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000000771	-	1168	XM_019868648	ENSHCOP00000022554	345 (aa)	XP_019724207	UPI00094E9685

Gene Model

Click here to download ENSHCOG00000010349's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000010349's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000010349	rbm4.3	100	54.366	ENSHCOG00000010363	rbm4.3	93	56.471

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000010349	rbm4.3	100	74.504	ENSAPOG00000002953	rbm4.3	95	74.850	Acanthochromis_polyacanthus
ENSHCOG00000010349	rbm4.3	96	60.355	ENSAPOG00000002991	rbm4.3	94	60.241	Acanthochromis_polyacanthus
ENSHCOG00000010349	rbm4.3	100	72.159	ENSACIG00000021311	-	95	72.673	Amphilophus_citrinellus
ENSHCOG00000010349	rbm4.3	96	65.774	ENSACIG00000021295	rbm4.3	95	66.163	Amphilophus_citrinellus
ENSHCOG00000010349	rbm4.3	96	63.018	ENSAOCG00000007992	rbm4.3	95	62.349	Amphiprion_ocellaris
ENSHCOG00000010349	rbm4.3	100	74.716	ENSAOCG00000008015	rbm4.3	95	74.775	Amphiprion_ocellaris
ENSHCOG00000010349	rbm4.3	96	63.314	ENSAPEG00000017288	rbm4.3	95	62.651	Amphiprion_percula
ENSHCOG00000010349	rbm4.3	100	75.000	ENSAPEG00000017324	rbm4.3	95	74.474	Amphiprion_percula
ENSHCOG00000010349	rbm4.3	96	64.095	ENSATEG00000019395	rbm4.3	94	60.121	Anabas_testudineus
ENSHCOG00000010349	rbm4.3	100	72.727	ENSATEG00000019375	rbm4.3	95	72.973	Anabas_testudineus
ENSHCOG00000010349	rbm4.3	100	72.159	ENSACLG00000010620	-	95	72.372	Astatotilapia_calliptera
ENSHCOG00000010349	rbm4.3	96	65.282	ENSACLG00000010642	rbm4.3	94	65.861	Astatotilapia_calliptera
ENSHCOG00000010349	rbm4.3	60	73.077	ENSAMXG00000040224	rbm4.3	82	72.000	Astyanax_mexicanus
ENSHCOG00000010349	rbm4.3	100	72.113	ENSCSEG00000013659	rbm4.3	95	71.726	Cynoglossus_semilaevis
ENSHCOG00000010349	rbm4.3	100	71.023	ENSCVAG00000008508	rbm4.3	95	72.673	Cyprinodon_variegatus
ENSHCOG00000010349	rbm4.3	99	60.857	ENSCVAG00000008502	rbm4.3	95	60.661	Cyprinodon_variegatus
ENSHCOG00000010349	rbm4.3	94	64.478	ENSDARG00000022129	rbm4.3	95	64.776	Danio_rerio
ENSHCOG00000010349	rbm4.3	100	63.202	ENSELUG00000022168	rbm4.3	95	64.095	Esox_lucius
ENSHCOG00000010349	rbm4.3	99	67.797	ENSELUG00000022155	rbm4.3	96	67.062	Esox_lucius
ENSHCOG00000010349	rbm4.3	99	67.422	ENSELUG00000022150	rbm4.3	95	66.071	Esox_lucius
ENSHCOG00000010349	rbm4.3	96	55.780	ENSFHEG00000023096	rbm4.3	95	56.845	Fundulus_heteroclitus
ENSHCOG00000010349	rbm4.3	79	75.812	ENSFHEG00000023137	rbm4.3	86	75.458	Fundulus_heteroclitus
ENSHCOG00000010349	rbm4.3	100	56.410	ENSGAFG00000001935	rbm4.3	94	54.655	Gambusia_affinis
ENSHCOG00000010349	rbm4.3	99	60.563	ENSGACG00000019980	rbm4.3	94	62.908	Gasterosteus_aculeatus
ENSHCOG00000010349	rbm4.3	96	65.579	ENSHBUG00000009051	rbm4.3	94	66.163	Haplochromis_burtoni
ENSHCOG00000010349	rbm4.3	100	72.159	ENSHBUG00000009020	-	95	72.372	Haplochromis_burtoni
ENSHCOG00000010349	rbm4.3	100	63.305	ENSIPUG00000022943	RBM4B	95	61.538	Ictalurus_punctatus
ENSHCOG00000010349	rbm4.3	100	68.376	ENSKMAG00000017468	rbm4.3	95	68.675	Kryptolebias_marmoratus
ENSHCOG00000010349	rbm4.3	95	58.084	ENSKMAG00000014541	rbm4.3	94	61.261	Kryptolebias_marmoratus
ENSHCOG00000010349	rbm4.3	53	69.355	ENSLBEG00000001025	rbm4.3	87	68.421	Labrus_bergylta
ENSHCOG00000010349	rbm4.3	100	72.727	ENSLBEG00000001071	-	95	73.952	Labrus_bergylta
ENSHCOG00000010349	rbm4.3	94	57.064	ENSLOCG00000002755	rbm4.3	96	56.233	Lepisosteus_oculatus
ENSHCOG00000010349	rbm4.3	96	59.524	ENSMAMG00000004701	rbm4.3	94	61.818	Mastacembelus_armatus
ENSHCOG00000010349	rbm4.3	100	73.580	ENSMAMG00000004715	-	80	73.874	Mastacembelus_armatus
ENSHCOG00000010349	rbm4.3	100	68.750	ENSMZEG00005007417	-	95	69.069	Maylandia_zebra
ENSHCOG00000010349	rbm4.3	84	68.814	ENSMZEG00005028537	-	85	68.543	Maylandia_zebra
ENSHCOG00000010349	rbm4.3	96	65.282	ENSMZEG00005028540	rbm4.3	94	65.861	Maylandia_zebra
ENSHCOG00000010349	rbm4.3	85	66.330	ENSMZEG00005007441	rbm4.3	79	66.330	Maylandia_zebra
ENSHCOG00000010349	rbm4.3	99	63.533	ENSMMOG00000012191	rbm4.3	94	62.048	Mola_mola
ENSHCOG00000010349	rbm4.3	86	72.039	ENSMALG00000003001	rbm4.3	87	73.154	Monopterus_albus
ENSHCOG00000010349	rbm4.3	90	62.620	ENSMALG00000003032	rbm4.3	94	58.786	Monopterus_albus
ENSHCOG00000010349	rbm4.3	96	61.493	ENSMALG00000015014	-	93	59.259	Monopterus_albus
ENSHCOG00000010349	rbm4.3	99	66.762	ENSNBRG00000012372	rbm4.3	94	65.257	Neolamprologus_brichardi
ENSHCOG00000010349	rbm4.3	99	65.625	ENSONIG00000018378	rbm4.3	94	64.072	Oreochromis_niloticus
ENSHCOG00000010349	rbm4.3	100	72.159	ENSONIG00000018380	-	95	72.372	Oreochromis_niloticus
ENSHCOG00000010349	rbm4.3	99	58.046	ENSORLG00000024749	rbm4.3	94	53.754	Oryzias_latipes
ENSHCOG00000010349	rbm4.3	100	70.391	ENSORLG00000012473	rbm4.3	95	68.437	Oryzias_latipes
ENSHCOG00000010349	rbm4.3	100	70.225	ENSORLG00000011589	rbm4.3	95	68.843	Oryzias_latipes
ENSHCOG00000010349	rbm4.3	100	70.787	ENSORLG00020012474	rbm4.3	95	68.546	Oryzias_latipes_hni
ENSHCOG00000010349	rbm4.3	100	70.391	ENSORLG00020012464	rbm4.3	95	68.437	Oryzias_latipes_hni
ENSHCOG00000010349	rbm4.3	99	57.061	ENSORLG00020012482	rbm4.3	95	53.754	Oryzias_latipes_hni
ENSHCOG00000010349	rbm4.3	95	57.057	ENSORLG00015013721	rbm4.3	95	53.453	Oryzias_latipes_hsok
ENSHCOG00000010349	rbm4.3	100	70.391	ENSORLG00015013686	rbm4.3	95	68.142	Oryzias_latipes_hsok
ENSHCOG00000010349	rbm4.3	100	71.067	ENSORLG00015013698	rbm4.3	95	68.546	Oryzias_latipes_hsok
ENSHCOG00000010349	rbm4.3	95	59.940	ENSOMEG00000005950	rbm4.3	94	58.967	Oryzias_melastigma
ENSHCOG00000010349	rbm4.3	100	70.868	ENSOMEG00000005929	rbm4.3	95	69.527	Oryzias_melastigma
ENSHCOG00000010349	rbm4.3	100	69.081	ENSOMEG00000005918	rbm4.3	94	69.184	Oryzias_melastigma
ENSHCOG00000010349	rbm4.3	93	63.473	ENSPKIG00000007001	rbm4.3	97	60.542	Paramormyrops_kingsleyae
ENSHCOG00000010349	rbm4.3	96	60.117	ENSPLAG00000006077	rbm4.3	95	59.403	Poecilia_latipinna
ENSHCOG00000010349	rbm4.3	100	71.591	ENSPLAG00000006131	rbm4.3	95	73.030	Poecilia_latipinna
ENSHCOG00000010349	rbm4.3	96	60.588	ENSPMEG00000024260	rbm4.3	95	58.383	Poecilia_mexicana
ENSHCOG00000010349	rbm4.3	100	73.295	ENSPMEG00000024263	rbm4.3	95	73.574	Poecilia_mexicana
ENSHCOG00000010349	rbm4.3	100	71.023	ENSPMEG00000024271	rbm4.3	95	72.727	Poecilia_mexicana
ENSHCOG00000010349	rbm4.3	99	59.831	ENSPREG00000002093	-	95	59.281	Poecilia_reticulata
ENSHCOG00000010349	rbm4.3	100	67.429	ENSPREG00000002156	rbm4.3	95	66.565	Poecilia_reticulata
ENSHCOG00000010349	rbm4.3	100	72.159	ENSPNYG00000018541	rbm4.3	95	72.372	Pundamilia_nyererei
ENSHCOG00000010349	rbm4.3	96	65.579	ENSPNYG00000018564	rbm4.3	94	66.465	Pundamilia_nyererei
ENSHCOG00000010349	rbm4.3	100	64.754	ENSPNAG00000013053	rbm4.3	95	62.682	Pygocentrus_nattereri
ENSHCOG00000010349	rbm4.3	100	63.760	ENSSFOG00015015563	rbm4.3	96	63.506	Scleropages_formosus
ENSHCOG00000010349	rbm4.3	99	63.506	ENSSMAG00000013653	rbm4.3	94	63.030	Scophthalmus_maximus
ENSHCOG00000010349	rbm4.3	100	74.366	ENSSMAG00000013644	rbm4.3	95	73.574	Scophthalmus_maximus
ENSHCOG00000010349	rbm4.3	96	64.201	ENSSDUG00000018422	rbm4.3	95	61.145	Seriola_dumerili
ENSHCOG00000010349	rbm4.3	100	73.864	ENSSDUG00000018435	rbm4.3	95	73.874	Seriola_dumerili
ENSHCOG00000010349	rbm4.3	100	73.864	ENSSLDG00000017204	rbm4.3	95	73.874	Seriola_lalandi_dorsalis
ENSHCOG00000010349	rbm4.3	96	63.798	ENSSLDG00000017182	rbm4.3	95	60.241	Seriola_lalandi_dorsalis
ENSHCOG00000010349	rbm4.3	100	74.359	ENSSPAG00000008062	rbm4.3	95	75.075	Stegastes_partitus
ENSHCOG00000010349	rbm4.3	95	62.874	ENSSPAG00000008041	rbm4.3	80	60.843	Stegastes_partitus
ENSHCOG00000010349	rbm4.3	100	74.716	ENSTRUG00000020901	rbm4.3	95	74.850	Takifugu_rubripes
ENSHCOG00000010349	rbm4.3	99	62.428	ENSTRUG00000023874	rbm4.3	94	63.554	Takifugu_rubripes
ENSHCOG00000010349	rbm4.3	100	72.365	ENSTNIG00000005668	rbm4.3	95	72.289	Tetraodon_nigroviridis
ENSHCOG00000010349	rbm4.3	100	72.727	ENSXCOG00000006001	rbm4.3	95	72.973	Xiphophorus_couchianus
ENSHCOG00000010349	rbm4.3	96	58.284	ENSXCOG00000005996	rbm4.3	95	59.281	Xiphophorus_couchianus
ENSHCOG00000010349	rbm4.3	96	59.412	ENSXMAG00000025173	rbm4.3	95	59.281	Xiphophorus_maculatus
ENSHCOG00000010349	rbm4.3	100	71.023	ENSXMAG00000011698	rbm4.3	96	72.072	Xiphophorus_maculatus
ENSHCOG00000010349	rbm4.3	100	72.727	ENSXMAG00000021997	rbm4.3	95	72.973	Xiphophorus_maculatus