EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000010363 (Gene tree)
Gene ID: 109515095
Gene Symbol: rbm4.3 (1 of many)
Alias: -
Full Name: RNA-binding protein 4B-like
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 4994 bases
Position: chrKV879891.1:51078-56071
Accession: 109515095
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000008190	RRM_5	PF13893.6	2.1e-09	1	2
ENSHCOP00000008190	RRM_5	PF13893.6	2.1e-09	2	2
ENSHCOP00000022576	RRM_5	PF13893.6	2.1e-09	1	2
ENSHCOP00000022576	RRM_5	PF13893.6	2.1e-09	2	2
ENSHCOP00000008190	RRM_1	PF00076.22	3.7e-26	1	2
ENSHCOP00000008190	RRM_1	PF00076.22	3.7e-26	2	2
ENSHCOP00000022576	RRM_1	PF00076.22	3.7e-26	1	2
ENSHCOP00000022576	RRM_1	PF00076.22	3.7e-26	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000000754	-	2804	-	ENSHCOP00000022576	352 (aa)	-	UPI00094F2BF5
ENSHCOT00000000749	-	2248	XM_019868678	ENSHCOP00000008190	352 (aa)	XP_019724237	UPI00094F2BF5

Gene Model

Click here to download ENSHCOG00000010363's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000010363's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000010363	rbm4.3	93	56.471	ENSHCOG00000010349	rbm4.3	100	54.366

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000010363	rbm4.3	99	69.714	ENSAPOG00000002991	rbm4.3	100	68.966	Acanthochromis_polyacanthus
ENSHCOG00000010363	rbm4.3	94	68.546	ENSACIG00000021295	rbm4.3	100	67.236	Amphilophus_citrinellus
ENSHCOG00000010363	rbm4.3	94	69.643	ENSAOCG00000007992	rbm4.3	100	67.622	Amphiprion_ocellaris
ENSHCOG00000010363	rbm4.3	94	69.643	ENSAPEG00000017288	rbm4.3	100	67.622	Amphiprion_percula
ENSHCOG00000010363	rbm4.3	99	71.429	ENSATEG00000019395	rbm4.3	100	70.487	Anabas_testudineus
ENSHCOG00000010363	rbm4.3	94	71.429	ENSACLG00000010642	rbm4.3	100	66.761	Astatotilapia_calliptera
ENSHCOG00000010363	rbm4.3	51	66.484	ENSAMXG00000040224	rbm4.3	62	73.154	Astyanax_mexicanus
ENSHCOG00000010363	rbm4.3	99	62.712	ENSCVAG00000008502	rbm4.3	100	63.636	Cyprinodon_variegatus
ENSHCOG00000010363	rbm4.3	94	65.797	ENSFHEG00000023096	rbm4.3	100	63.788	Fundulus_heteroclitus
ENSHCOG00000010363	rbm4.3	93	64.242	ENSGAFG00000001935	rbm4.3	99	62.931	Gambusia_affinis
ENSHCOG00000010363	rbm4.3	99	65.537	ENSGACG00000019980	rbm4.3	100	64.589	Gasterosteus_aculeatus
ENSHCOG00000010363	rbm4.3	94	71.131	ENSHBUG00000009051	rbm4.3	100	66.477	Haplochromis_burtoni
ENSHCOG00000010363	rbm4.3	94	62.722	ENSKMAG00000014541	rbm4.3	100	60.674	Kryptolebias_marmoratus
ENSHCOG00000010363	rbm4.3	54	74.479	ENSLBEG00000001025	rbm4.3	68	79.866	Labrus_bergylta
ENSHCOG00000010363	rbm4.3	94	57.349	ENSLBEG00000001071	-	99	58.333	Labrus_bergylta
ENSHCOG00000010363	rbm4.3	92	53.444	ENSLOCG00000002755	rbm4.3	79	66.456	Lepisosteus_oculatus
ENSHCOG00000010363	rbm4.3	99	69.143	ENSMAMG00000004701	rbm4.3	100	67.908	Mastacembelus_armatus
ENSHCOG00000010363	rbm4.3	82	57.143	ENSMZEG00005028537	-	58	75.000	Maylandia_zebra
ENSHCOG00000010363	rbm4.3	94	71.429	ENSMZEG00005028540	rbm4.3	100	66.761	Maylandia_zebra
ENSHCOG00000010363	rbm4.3	83	73.649	ENSMZEG00005007441	rbm4.3	79	69.863	Maylandia_zebra
ENSHCOG00000010363	rbm4.3	91	52.663	ENSMZEG00005007417	-	96	56.928	Maylandia_zebra
ENSHCOG00000010363	rbm4.3	94	66.667	ENSMMOG00000012191	rbm4.3	100	65.057	Mola_mola
ENSHCOG00000010363	rbm4.3	88	71.061	ENSMALG00000003032	rbm4.3	94	69.329	Monopterus_albus
ENSHCOG00000010363	rbm4.3	99	67.622	ENSMALG00000015014	-	100	66.189	Monopterus_albus
ENSHCOG00000010363	rbm4.3	94	70.833	ENSNBRG00000012372	rbm4.3	100	66.667	Neolamprologus_brichardi
ENSHCOG00000010363	rbm4.3	94	70.294	ENSONIG00000018378	rbm4.3	100	67.042	Oreochromis_niloticus
ENSHCOG00000010363	rbm4.3	99	62.040	ENSOMEG00000005950	rbm4.3	100	60.227	Oryzias_melastigma
ENSHCOG00000010363	rbm4.3	89	59.938	ENSPKIG00000007001	rbm4.3	66	73.248	Paramormyrops_kingsleyae
ENSHCOG00000010363	rbm4.3	99	64.903	ENSPLAG00000006077	rbm4.3	100	63.585	Poecilia_latipinna
ENSHCOG00000010363	rbm4.3	99	64.246	ENSPMEG00000024260	rbm4.3	100	63.944	Poecilia_mexicana
ENSHCOG00000010363	rbm4.3	99	65.738	ENSPREG00000002093	-	100	63.944	Poecilia_reticulata
ENSHCOG00000010363	rbm4.3	94	70.623	ENSPNYG00000018564	rbm4.3	100	66.572	Pundamilia_nyererei
ENSHCOG00000010363	rbm4.3	98	54.372	ENSSFOG00015015563	rbm4.3	69	52.381	Scleropages_formosus
ENSHCOG00000010363	rbm4.3	94	66.172	ENSSMAG00000013653	rbm4.3	100	64.286	Scophthalmus_maximus
ENSHCOG00000010363	rbm4.3	94	70.238	ENSSDUG00000018422	rbm4.3	100	66.667	Seriola_dumerili
ENSHCOG00000010363	rbm4.3	94	69.643	ENSSLDG00000017182	rbm4.3	100	66.667	Seriola_lalandi_dorsalis
ENSHCOG00000010363	rbm4.3	99	69.341	ENSSPAG00000008041	rbm4.3	85	68.966	Stegastes_partitus
ENSHCOG00000010363	rbm4.3	94	69.345	ENSTRUG00000023874	rbm4.3	100	67.045	Takifugu_rubripes
ENSHCOG00000010363	rbm4.3	98	54.366	ENSTNIG00000005668	rbm4.3	99	54.467	Tetraodon_nigroviridis
ENSHCOG00000010363	rbm4.3	94	65.680	ENSXCOG00000005996	rbm4.3	99	64.387	Xiphophorus_couchianus
ENSHCOG00000010363	rbm4.3	99	64.426	ENSXMAG00000025173	rbm4.3	100	64.225	Xiphophorus_maculatus