EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000010376 (Gene tree)
Gene ID: 109516186
Gene Symbol: tomm20a
Alias: arid4b|ch1073-321c8.1|wu:fk47b11
Full Name: AT-rich interaction domain 4B
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 22490 bases
Position: chrKV879954.1:3706048-3728537
Accession: 109516186
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000008094	Tudor-knot	PF11717.8	5e-10	1	1
ENSHCOP00000008005	Tudor-knot	PF11717.8	2.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000000969	-	3201	-	ENSHCOP00000008038	1066 (aa)	-	-
ENSHCOT00000000899	-	5106	-	ENSHCOP00000008084	1062 (aa)	-	-
ENSHCOT00000000886	-	5289	-	ENSHCOP00000008094	1123 (aa)	-	-
ENSHCOT00000001044	-	3513	XM_019870496	ENSHCOP00000008005	1170 (aa)	XP_019726055	-

Gene Model

Click here to download ENSHCOG00000010376's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000010376's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000010376	tomm20a	95	73.544	ENSG00000054267	ARID4B	91	73.366	Homo_sapiens
ENSHCOG00000010376	tomm20a	100	84.749	ENSAPOG00000010823	tomm20a	95	85.839	Acanthochromis_polyacanthus
ENSHCOG00000010376	tomm20a	95	73.850	ENSAMEG00000008801	ARID4B	91	73.913	Ailuropoda_melanoleuca
ENSHCOG00000010376	tomm20a	100	76.647	ENSACIG00000006313	tomm20a	100	77.648	Amphilophus_citrinellus
ENSHCOG00000010376	tomm20a	100	82.737	ENSAOCG00000003330	tomm20a	95	85.839	Amphiprion_ocellaris
ENSHCOG00000010376	tomm20a	100	82.316	ENSAPEG00000024018	tomm20a	95	85.403	Amphiprion_percula
ENSHCOG00000010376	tomm20a	100	84.279	ENSATEG00000014930	tomm20a	97	85.153	Anabas_testudineus
ENSHCOG00000010376	tomm20a	99	71.739	ENSAPLG00000004422	ARID4B	86	71.084	Anas_platyrhynchos
ENSHCOG00000010376	tomm20a	95	73.301	ENSANAG00000038088	ARID4B	91	73.123	Aotus_nancymaae
ENSHCOG00000010376	tomm20a	100	72.848	ENSACLG00000023521	tomm20a	100	72.930	Astatotilapia_calliptera
ENSHCOG00000010376	tomm20a	75	93.258	ENSAMXG00000003657	tomm20a	95	64.945	Astyanax_mexicanus
ENSHCOG00000010376	tomm20a	95	73.786	ENSBTAG00000000222	ARID4B	91	73.608	Bos_taurus
ENSHCOG00000010376	tomm20a	83	69.595	ENSCJAG00000018055	ARID4B	94	69.752	Callithrix_jacchus
ENSHCOG00000010376	tomm20a	99	48.017	ENSCAFG00000011439	ARID4B	91	73.850	Canis_familiaris
ENSHCOG00000010376	tomm20a	99	48.017	ENSCAFG00020027130	ARID4B	91	73.039	Canis_lupus_dingo
ENSHCOG00000010376	tomm20a	95	69.779	ENSCHIG00000020742	ARID4B	91	69.608	Capra_hircus
ENSHCOG00000010376	tomm20a	70	73.077	ENSTSYG00000010028	ARID4B	91	73.141	Carlito_syrichta
ENSHCOG00000010376	tomm20a	95	74.272	ENSCPOG00000034766	ARID4B	91	73.850	Cavia_porcellus
ENSHCOG00000010376	tomm20a	95	73.301	ENSCCAG00000021520	ARID4B	91	73.123	Cebus_capucinus
ENSHCOG00000010376	tomm20a	95	73.544	ENSCATG00000042166	ARID4B	91	73.366	Cercocebus_atys
ENSHCOG00000010376	tomm20a	95	73.786	ENSCLAG00000003255	ARID4B	87	73.366	Chinchilla_lanigera
ENSHCOG00000010376	tomm20a	95	73.544	ENSCSAG00000010069	ARID4B	91	73.366	Chlorocebus_sabaeus
ENSHCOG00000010376	tomm20a	95	67.640	ENSCANG00000027498	ARID4B	90	66.262	Colobus_angolensis_palliatus
ENSHCOG00000010376	tomm20a	95	74.029	ENSCGRG00001014397	Arid4b	91	73.850	Cricetulus_griseus_chok1gshd
ENSHCOG00000010376	tomm20a	95	74.029	ENSCGRG00000004910	Arid4b	91	73.850	Cricetulus_griseus_crigri
ENSHCOG00000010376	tomm20a	98	82.751	ENSCSEG00000012928	tomm20a	94	81.659	Cynoglossus_semilaevis
ENSHCOG00000010376	tomm20a	100	81.360	ENSCVAG00000003244	tomm20a	94	82.237	Cyprinodon_variegatus
ENSHCOG00000010376	tomm20a	99	56.552	ENSDARG00000090656	tomm20a	98	54.581	Danio_rerio
ENSHCOG00000010376	tomm20a	95	73.786	ENSDORG00000006422	Arid4b	91	73.608	Dipodomys_ordii
ENSHCOG00000010376	tomm20a	93	64.758	ENSETEG00000005596	ARID4B	87	61.436	Echinops_telfairi
ENSHCOG00000010376	tomm20a	70	74.272	ENSEASG00005000677	ARID4B	88	74.092	Equus_asinus_asinus
ENSHCOG00000010376	tomm20a	70	74.272	ENSECAG00000017836	ARID4B	90	74.092	Equus_caballus
ENSHCOG00000010376	tomm20a	67	65.613	ENSELUG00000018441	tomm20a	81	66.429	Esox_lucius
ENSHCOG00000010376	tomm20a	99	47.467	ENSFCAG00000030096	ARID4B	91	73.850	Felis_catus
ENSHCOG00000010376	tomm20a	95	73.544	ENSFDAG00000014194	ARID4B	87	73.123	Fukomys_damarensis
ENSHCOG00000010376	tomm20a	100	81.046	ENSFHEG00000003798	tomm20a	96	81.699	Fundulus_heteroclitus
ENSHCOG00000010376	tomm20a	89	81.991	ENSGMOG00000018747	tomm20a	83	81.149	Gadus_morhua
ENSHCOG00000010376	tomm20a	99	70.114	ENSGACG00000004298	tomm20a	99	69.692	Gasterosteus_aculeatus
ENSHCOG00000010376	tomm20a	95	73.544	ENSGGOG00000022080	ARID4B	91	73.366	Gorilla_gorilla
ENSHCOG00000010376	tomm20a	100	83.406	ENSHBUG00000020369	tomm20a	95	84.061	Haplochromis_burtoni
ENSHCOG00000010376	tomm20a	95	73.544	ENSHGLG00000012546	ARID4B	91	73.123	Heterocephalus_glaber_female
ENSHCOG00000010376	tomm20a	95	73.544	ENSHGLG00100015436	ARID4B	91	73.123	Heterocephalus_glaber_male
ENSHCOG00000010376	tomm20a	98	77.700	ENSIPUG00000014234	arid4b	91	77.230	Ictalurus_punctatus
ENSHCOG00000010376	tomm20a	95	74.029	ENSSTOG00000002810	ARID4B	91	73.850	Ictidomys_tridecemlineatus
ENSHCOG00000010376	tomm20a	95	73.301	ENSJJAG00000021368	Arid4b	87	73.301	Jaculus_jaculus
ENSHCOG00000010376	tomm20a	93	88.571	ENSKMAG00000010987	tomm20a	98	70.648	Kryptolebias_marmoratus
ENSHCOG00000010376	tomm20a	97	71.528	ENSLOCG00000015899	tomm20a	99	56.667	Lepisosteus_oculatus
ENSHCOG00000010376	tomm20a	70	73.786	ENSLAFG00000014295	ARID4B	91	73.608	Loxodonta_africana
ENSHCOG00000010376	tomm20a	95	73.544	ENSMFAG00000044016	ARID4B	91	73.366	Macaca_fascicularis
ENSHCOG00000010376	tomm20a	95	73.544	ENSMMUG00000007141	ARID4B	91	73.366	Macaca_mulatta
ENSHCOG00000010376	tomm20a	95	73.544	ENSMNEG00000014840	ARID4B	91	73.366	Macaca_nemestrina
ENSHCOG00000010376	tomm20a	95	73.529	ENSMLEG00000033583	ARID4B	91	73.350	Mandrillus_leucophaeus
ENSHCOG00000010376	tomm20a	92	84.498	ENSMAMG00000017134	tomm20a	93	84.934	Mastacembelus_armatus
ENSHCOG00000010376	tomm20a	100	83.188	ENSMZEG00005009879	tomm20a	95	83.843	Maylandia_zebra
ENSHCOG00000010376	tomm20a	50	71.875	ENSMGAG00000011896	ARID4B	86	72.881	Meleagris_gallopavo
ENSHCOG00000010376	tomm20a	95	73.786	ENSMICG00000016358	ARID4B	91	73.608	Microcebus_murinus
ENSHCOG00000010376	tomm20a	98	78.220	ENSMMOG00000000561	tomm20a	98	78.309	Mola_mola
ENSHCOG00000010376	tomm20a	96	72.596	ENSMODG00000008417	ARID4B	91	72.422	Monodelphis_domestica
ENSHCOG00000010376	tomm20a	100	84.279	ENSMALG00000005205	tomm20a	95	84.934	Monopterus_albus
ENSHCOG00000010376	tomm20a	95	73.786	MGP_CAROLIEiJ_G0018236	Arid4b	91	73.608	Mus_caroli
ENSHCOG00000010376	tomm20a	95	73.301	ENSMUSG00000039219	Arid4b	91	73.301	Mus_musculus
ENSHCOG00000010376	tomm20a	95	73.786	MGP_PahariEiJ_G0019286	Arid4b	91	73.608	Mus_pahari
ENSHCOG00000010376	tomm20a	95	73.301	MGP_SPRETEiJ_G0019094	Arid4b	91	73.301	Mus_spretus
ENSHCOG00000010376	tomm20a	95	73.786	ENSMPUG00000002906	ARID4B	91	73.608	Mustela_putorius_furo
ENSHCOG00000010376	tomm20a	71	72.770	ENSMLUG00000016232	ARID4B	92	72.600	Myotis_lucifugus
ENSHCOG00000010376	tomm20a	95	73.544	ENSNGAG00000014629	Arid4b	91	73.366	Nannospalax_galili
ENSHCOG00000010376	tomm20a	100	76.261	ENSNBRG00000019684	tomm20a	100	76.427	Neolamprologus_brichardi
ENSHCOG00000010376	tomm20a	95	73.786	ENSNLEG00000002665	ARID4B	91	73.608	Nomascus_leucogenys
ENSHCOG00000010376	tomm20a	95	74.029	ENSODEG00000005373	ARID4B	87	73.850	Octodon_degus
ENSHCOG00000010376	tomm20a	70	73.786	ENSOCUG00000006605	ARID4B	91	73.608	Oryctolagus_cuniculus
ENSHCOG00000010376	tomm20a	100	77.948	ENSORLG00000012510	tomm20a	98	79.258	Oryzias_latipes
ENSHCOG00000010376	tomm20a	100	71.440	ENSORLG00020013988	tomm20a	100	71.429	Oryzias_latipes_hni
ENSHCOG00000010376	tomm20a	100	71.369	ENSORLG00015022835	tomm20a	100	71.273	Oryzias_latipes_hsok
ENSHCOG00000010376	tomm20a	100	74.587	ENSOMEG00000000521	tomm20a	98	79.476	Oryzias_melastigma
ENSHCOG00000010376	tomm20a	94	73.608	ENSOARG00000003481	ARID4B	85	73.671	Ovis_aries
ENSHCOG00000010376	tomm20a	99	47.490	ENSPPAG00000031651	ARID4B	91	73.366	Pan_paniscus
ENSHCOG00000010376	tomm20a	70	74.029	ENSPPRG00000013739	ARID4B	91	73.850	Panthera_pardus
ENSHCOG00000010376	tomm20a	70	74.029	ENSPTIG00000012520	ARID4B	91	73.850	Panthera_tigris_altaica
ENSHCOG00000010376	tomm20a	95	73.544	ENSPTRG00000002129	ARID4B	91	73.366	Pan_troglodytes
ENSHCOG00000010376	tomm20a	78	70.476	ENSPTRG00000048786	-	85	70.476	Pan_troglodytes
ENSHCOG00000010376	tomm20a	95	72.087	ENSPANG00000013611	ARID4B	91	71.671	Papio_anubis
ENSHCOG00000010376	tomm20a	58	81.250	ENSPMGG00000001596	tomm20a	85	81.250	Periophthalmus_magnuspinnatus
ENSHCOG00000010376	tomm20a	96	71.562	ENSPCIG00000029756	ARID4B	89	71.395	Phascolarctos_cinereus
ENSHCOG00000010376	tomm20a	100	81.957	ENSPFOG00000019430	tomm20a	97	83.043	Poecilia_formosa
ENSHCOG00000010376	tomm20a	100	83.913	ENSPLAG00000010554	tomm20a	97	82.826	Poecilia_latipinna
ENSHCOG00000010376	tomm20a	100	77.938	ENSPMEG00000003093	tomm20a	81	87.085	Poecilia_mexicana
ENSHCOG00000010376	tomm20a	100	81.522	ENSPREG00000007996	tomm20a	97	82.609	Poecilia_reticulata
ENSHCOG00000010376	tomm20a	95	73.544	ENSPPYG00000000098	ARID4B	91	73.366	Pongo_abelii
ENSHCOG00000010376	tomm20a	95	73.786	ENSPCOG00000024328	ARID4B	91	73.608	Propithecus_coquereli
ENSHCOG00000010376	tomm20a	74	74.029	ENSPVAG00000015159	ARID4B	87	74.029	Pteropus_vampyrus
ENSHCOG00000010376	tomm20a	100	72.917	ENSPNYG00000013988	tomm20a	100	73.194	Pundamilia_nyererei
ENSHCOG00000010376	tomm20a	96	81.884	ENSPNAG00000000523	tomm20a	87	74.255	Pygocentrus_nattereri
ENSHCOG00000010376	tomm20a	81	68.145	ENSRNOG00000016391	LOC100912163	88	68.145	Rattus_norvegicus
ENSHCOG00000010376	tomm20a	95	71.394	ENSRBIG00000042029	ARID4B	88	71.220	Rhinopithecus_bieti
ENSHCOG00000010376	tomm20a	70	73.544	ENSRROG00000045203	ARID4B	91	73.366	Rhinopithecus_roxellana
ENSHCOG00000010376	tomm20a	76	71.809	ENSSBOG00000020196	ARID4B	89	71.809	Saimiri_boliviensis_boliviensis
ENSHCOG00000010376	tomm20a	50	72.837	ENSSHAG00000015214	ARID4B	91	72.488	Sarcophilus_harrisii
ENSHCOG00000010376	tomm20a	88	49.161	ENSSFOG00015008923	tomm20a	98	50.149	Scleropages_formosus
ENSHCOG00000010376	tomm20a	95	78.019	ENSSFOG00015000132	arid4b	88	78.744	Scleropages_formosus
ENSHCOG00000010376	tomm20a	100	82.314	ENSSMAG00000010430	tomm20a	93	83.188	Scophthalmus_maximus
ENSHCOG00000010376	tomm20a	100	84.716	ENSSDUG00000003019	tomm20a	95	85.808	Seriola_dumerili
ENSHCOG00000010376	tomm20a	95	72.596	ENSSPUG00000015466	ARID4B	86	72.902	Sphenodon_punctatus
ENSHCOG00000010376	tomm20a	100	84.279	ENSSPAG00000007358	tomm20a	95	84.934	Stegastes_partitus
ENSHCOG00000010376	tomm20a	70	73.786	ENSSSCG00000010156	ARID4B	94	73.608	Sus_scrofa
ENSHCOG00000010376	tomm20a	80	65.124	ENSTRUG00000002893	tomm20a	100	65.835	Takifugu_rubripes
ENSHCOG00000010376	tomm20a	74	64.904	ENSTBEG00000003961	ARID4B	65	63.789	Tupaia_belangeri
ENSHCOG00000010376	tomm20a	95	72.330	ENSTTRG00000002228	ARID4B	91	72.330	Tursiops_truncatus
ENSHCOG00000010376	tomm20a	94	71.717	ENSUMAG00000006905	ARID4B	91	71.717	Ursus_maritimus
ENSHCOG00000010376	tomm20a	64	72.837	ENSVPAG00000006841	ARID4B	55	73.123	Vicugna_pacos
ENSHCOG00000010376	tomm20a	99	47.225	ENSVVUG00000008154	ARID4B	90	70.603	Vulpes_vulpes
ENSHCOG00000010376	tomm20a	96	69.712	ENSXETG00000024651	arid4b	87	68.510	Xenopus_tropicalis
ENSHCOG00000010376	tomm20a	100	81.739	ENSXMAG00000006538	tomm20a	97	82.826	Xiphophorus_maculatus