EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000010444 (Gene tree)
Gene ID: 109512281
Gene Symbol: si:dkey-17e16.10
Alias: -
Full Name: mitochondrial ribosomal protein S12
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 1594 bases
Position: chrKV879817.1:1730457-1732050
Accession: 109512281
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000008235	Ribosom_S12_S23	PF00164.25	9.6e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000000649	-	1022	XM_019863902	ENSHCOP00000008235	150 (aa)	XP_019719461	UPI00094E180A

Gene Model

Click here to download ENSHCOG00000010444's gene model file

Pathways

Pathway ID	Pathway Name	Source
hcq03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000010444's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000010444	si:dkey-17e16.10	75	74.336	ENSG00000128626	MRPS12	82	74.336	Homo_sapiens
ENSHCOG00000010444	si:dkey-17e16.10	96	81.250	ENSAPOG00000005047	si:dkey-17e16.10	100	81.250	Acanthochromis_polyacanthus
ENSHCOG00000010444	si:dkey-17e16.10	76	78.070	ENSAMEG00000008722	MRPS12	82	78.070	Ailuropoda_melanoleuca
ENSHCOG00000010444	si:dkey-17e16.10	96	80.556	ENSACIG00000016095	si:dkey-17e16.10	100	80.556	Amphilophus_citrinellus
ENSHCOG00000010444	si:dkey-17e16.10	96	81.944	ENSAOCG00000018530	si:dkey-17e16.10	100	81.944	Amphiprion_ocellaris
ENSHCOG00000010444	si:dkey-17e16.10	96	81.250	ENSAPEG00000019785	si:dkey-17e16.10	100	81.250	Amphiprion_percula
ENSHCOG00000010444	si:dkey-17e16.10	96	82.639	ENSATEG00000018924	si:dkey-17e16.10	100	82.639	Anabas_testudineus
ENSHCOG00000010444	si:dkey-17e16.10	73	73.394	ENSAPLG00000014350	-	73	73.394	Anas_platyrhynchos
ENSHCOG00000010444	si:dkey-17e16.10	73	80.909	ENSAPLG00000011925	-	79	80.909	Anas_platyrhynchos
ENSHCOG00000010444	si:dkey-17e16.10	74	81.081	ENSACAG00000003829	MRPS12	77	81.081	Anolis_carolinensis
ENSHCOG00000010444	si:dkey-17e16.10	94	67.376	ENSANAG00000033654	MRPS12	96	67.376	Aotus_nancymaae
ENSHCOG00000010444	si:dkey-17e16.10	96	81.944	ENSACLG00000013979	si:dkey-17e16.10	95	81.944	Astatotilapia_calliptera
ENSHCOG00000010444	si:dkey-17e16.10	76	83.333	ENSAMXG00000025945	si:dkey-17e16.10	100	69.388	Astyanax_mexicanus
ENSHCOG00000010444	si:dkey-17e16.10	77	77.586	ENSBTAG00000001782	MRPS12	83	77.586	Bos_taurus
ENSHCOG00000010444	si:dkey-17e16.10	65	60.606	WBGene00011391	mrps-12	63	60.606	Caenorhabditis_elegans
ENSHCOG00000010444	si:dkey-17e16.10	94	65.248	ENSCJAG00000043176	MRPS12	96	65.248	Callithrix_jacchus
ENSHCOG00000010444	si:dkey-17e16.10	94	69.504	ENSCAFG00000005623	MRPS12	96	69.504	Canis_familiaris
ENSHCOG00000010444	si:dkey-17e16.10	94	69.504	ENSCAFG00020016784	MRPS12	96	69.504	Canis_lupus_dingo
ENSHCOG00000010444	si:dkey-17e16.10	77	77.586	ENSCHIG00000013852	MRPS12	83	77.586	Capra_hircus
ENSHCOG00000010444	si:dkey-17e16.10	93	68.571	ENSTSYG00000009568	MRPS12	96	68.571	Carlito_syrichta
ENSHCOG00000010444	si:dkey-17e16.10	76	77.193	ENSCAPG00000009543	MRPS12	84	77.193	Cavia_aperea
ENSHCOG00000010444	si:dkey-17e16.10	95	66.901	ENSCPOG00000035217	MRPS12	97	66.901	Cavia_porcellus
ENSHCOG00000010444	si:dkey-17e16.10	93	65.000	ENSCCAG00000035388	MRPS12	96	65.000	Cebus_capucinus
ENSHCOG00000010444	si:dkey-17e16.10	76	74.561	ENSCATG00000038438	MRPS12	82	74.561	Cercocebus_atys
ENSHCOG00000010444	si:dkey-17e16.10	95	66.197	ENSCLAG00000013286	MRPS12	97	66.197	Chinchilla_lanigera
ENSHCOG00000010444	si:dkey-17e16.10	94	65.248	ENSCSAG00000003929	MRPS12	96	65.248	Chlorocebus_sabaeus
ENSHCOG00000010444	si:dkey-17e16.10	57	84.884	ENSCHOG00000008451	MRPS12	62	84.884	Choloepus_hoffmanni
ENSHCOG00000010444	si:dkey-17e16.10	77	81.739	ENSCPBG00000018941	MRPS12	74	81.739	Chrysemys_picta_bellii
ENSHCOG00000010444	si:dkey-17e16.10	65	63.265	ENSCSAVG00000008777	-	52	63.265	Ciona_savignyi
ENSHCOG00000010444	si:dkey-17e16.10	94	65.248	ENSCANG00000003652	MRPS12	96	65.248	Colobus_angolensis_palliatus
ENSHCOG00000010444	si:dkey-17e16.10	95	66.197	ENSCGRG00001018968	Mrps12	97	66.197	Cricetulus_griseus_chok1gshd
ENSHCOG00000010444	si:dkey-17e16.10	95	66.197	ENSCGRG00000007113	Mrps12	97	66.197	Cricetulus_griseus_crigri
ENSHCOG00000010444	si:dkey-17e16.10	89	82.707	ENSCSEG00000001174	si:dkey-17e16.10	93	82.707	Cynoglossus_semilaevis
ENSHCOG00000010444	si:dkey-17e16.10	96	82.639	ENSCVAG00000003253	si:dkey-17e16.10	100	82.639	Cyprinodon_variegatus
ENSHCOG00000010444	si:dkey-17e16.10	96	73.611	ENSDARG00000089836	MRPS12	100	73.611	Danio_rerio
ENSHCOG00000010444	si:dkey-17e16.10	94	68.794	ENSDNOG00000003918	MRPS12	96	68.794	Dasypus_novemcinctus
ENSHCOG00000010444	si:dkey-17e16.10	95	65.493	ENSDORG00000001544	Mrps12	97	65.493	Dipodomys_ordii
ENSHCOG00000010444	si:dkey-17e16.10	97	53.846	FBgn0003714	tko	99	53.846	Drosophila_melanogaster
ENSHCOG00000010444	si:dkey-17e16.10	76	78.947	ENSETEG00000017985	MRPS12	82	78.947	Echinops_telfairi
ENSHCOG00000010444	si:dkey-17e16.10	91	72.263	ENSEBUG00000003529	si:dkey-17e16.10	74	72.263	Eptatretus_burgeri
ENSHCOG00000010444	si:dkey-17e16.10	76	79.825	ENSEASG00005019736	MRPS12	97	69.014	Equus_asinus_asinus
ENSHCOG00000010444	si:dkey-17e16.10	76	79.825	ENSECAG00000013794	MRPS12	97	69.014	Equus_caballus
ENSHCOG00000010444	si:dkey-17e16.10	63	60.000	ENSEEUG00000013868	MRPS12	95	60.000	Erinaceus_europaeus
ENSHCOG00000010444	si:dkey-17e16.10	95	79.720	ENSELUG00000014973	si:dkey-17e16.10	99	79.720	Esox_lucius
ENSHCOG00000010444	si:dkey-17e16.10	95	69.014	ENSFCAG00000014573	MRPS12	97	69.014	Felis_catus
ENSHCOG00000010444	si:dkey-17e16.10	73	74.312	ENSFALG00000015276	MRPS12	97	73.874	Ficedula_albicollis
ENSHCOG00000010444	si:dkey-17e16.10	95	66.434	ENSFDAG00000008482	MRPS12	97	66.434	Fukomys_damarensis
ENSHCOG00000010444	si:dkey-17e16.10	96	81.250	ENSFHEG00000004575	si:dkey-17e16.10	100	81.250	Fundulus_heteroclitus
ENSHCOG00000010444	si:dkey-17e16.10	73	91.818	ENSGMOG00000020611	si:dkey-17e16.10	99	91.818	Gadus_morhua
ENSHCOG00000010444	si:dkey-17e16.10	95	67.808	ENSGALG00000038667	MRPS12	100	67.808	Gallus_gallus
ENSHCOG00000010444	si:dkey-17e16.10	81	89.256	ENSGAFG00000007521	si:dkey-17e16.10	85	89.256	Gambusia_affinis
ENSHCOG00000010444	si:dkey-17e16.10	99	69.481	ENSGACG00000003011	si:dkey-17e16.10	100	90.991	Gasterosteus_aculeatus
ENSHCOG00000010444	si:dkey-17e16.10	76	83.333	ENSGAGG00000009748	MRPS12	73	83.333	Gopherus_agassizii
ENSHCOG00000010444	si:dkey-17e16.10	93	65.000	ENSGGOG00000002500	MRPS12	96	65.000	Gorilla_gorilla
ENSHCOG00000010444	si:dkey-17e16.10	96	81.944	ENSHBUG00000014480	si:dkey-17e16.10	100	81.944	Haplochromis_burtoni
ENSHCOG00000010444	si:dkey-17e16.10	95	64.085	ENSHGLG00000014942	MRPS12	96	64.085	Heterocephalus_glaber_female
ENSHCOG00000010444	si:dkey-17e16.10	95	64.085	ENSHGLG00100017710	MRPS12	96	64.085	Heterocephalus_glaber_male
ENSHCOG00000010444	si:dkey-17e16.10	96	78.472	ENSIPUG00000024651	MRPS12	100	78.472	Ictalurus_punctatus
ENSHCOG00000010444	si:dkey-17e16.10	94	68.794	ENSSTOG00000009006	MRPS12	96	68.794	Ictidomys_tridecemlineatus
ENSHCOG00000010444	si:dkey-17e16.10	95	66.197	ENSJJAG00000017837	Mrps12	97	66.197	Jaculus_jaculus
ENSHCOG00000010444	si:dkey-17e16.10	89	80.597	ENSKMAG00000007949	si:dkey-17e16.10	85	80.597	Kryptolebias_marmoratus
ENSHCOG00000010444	si:dkey-17e16.10	80	87.500	ENSLBEG00000001112	si:dkey-17e16.10	86	87.500	Labrus_bergylta
ENSHCOG00000010444	si:dkey-17e16.10	75	86.726	ENSLACG00000018393	MRPS12	71	86.726	Latimeria_chalumnae
ENSHCOG00000010444	si:dkey-17e16.10	96	69.655	ENSLOCG00000000535	si:dkey-17e16.10	100	69.655	Lepisosteus_oculatus
ENSHCOG00000010444	si:dkey-17e16.10	76	74.561	ENSLAFG00000022140	MRPS12	82	74.561	Loxodonta_africana
ENSHCOG00000010444	si:dkey-17e16.10	94	65.957	ENSMFAG00000044563	MRPS12	96	65.957	Macaca_fascicularis
ENSHCOG00000010444	si:dkey-17e16.10	94	65.248	ENSMNEG00000040379	MRPS12	96	65.248	Macaca_nemestrina
ENSHCOG00000010444	si:dkey-17e16.10	76	74.561	ENSMLEG00000036963	MRPS12	82	74.561	Mandrillus_leucophaeus
ENSHCOG00000010444	si:dkey-17e16.10	96	81.250	ENSMAMG00000017962	si:dkey-17e16.10	100	81.250	Mastacembelus_armatus
ENSHCOG00000010444	si:dkey-17e16.10	89	85.075	ENSMZEG00005017336	si:dkey-17e16.10	94	85.075	Maylandia_zebra
ENSHCOG00000010444	si:dkey-17e16.10	73	81.818	ENSMGAG00000005414	MRPS12	77	81.818	Meleagris_gallopavo
ENSHCOG00000010444	si:dkey-17e16.10	70	62.857	ENSMAUG00000019146	Mrps12	95	62.857	Mesocricetus_auratus
ENSHCOG00000010444	si:dkey-17e16.10	94	67.376	ENSMICG00000045111	MRPS12	96	67.376	Microcebus_murinus
ENSHCOG00000010444	si:dkey-17e16.10	93	67.857	ENSMOCG00000012666	Mrps12	96	67.857	Microtus_ochrogaster
ENSHCOG00000010444	si:dkey-17e16.10	82	82.114	ENSMMOG00000010803	si:dkey-17e16.10	85	82.114	Mola_mola
ENSHCOG00000010444	si:dkey-17e16.10	95	65.517	ENSMODG00000013431	MRPS12	97	65.517	Monodelphis_domestica
ENSHCOG00000010444	si:dkey-17e16.10	96	80.556	ENSMALG00000004190	si:dkey-17e16.10	100	80.556	Monopterus_albus
ENSHCOG00000010444	si:dkey-17e16.10	76	77.193	MGP_CAROLIEiJ_G0029457	Mrps12	99	70.161	Mus_caroli
ENSHCOG00000010444	si:dkey-17e16.10	76	77.193	ENSMUSG00000045948	Mrps12	99	70.161	Mus_musculus
ENSHCOG00000010444	si:dkey-17e16.10	76	76.316	MGP_PahariEiJ_G0012691	Mrps12	99	69.355	Mus_pahari
ENSHCOG00000010444	si:dkey-17e16.10	76	77.193	MGP_SPRETEiJ_G0030553	Mrps12	99	70.161	Mus_spretus
ENSHCOG00000010444	si:dkey-17e16.10	94	68.085	ENSMPUG00000017750	MRPS12	86	79.130	Mustela_putorius_furo
ENSHCOG00000010444	si:dkey-17e16.10	94	68.085	ENSMLUG00000006076	MRPS12	96	68.085	Myotis_lucifugus
ENSHCOG00000010444	si:dkey-17e16.10	76	77.193	ENSNGAG00000022099	Mrps12	97	69.014	Nannospalax_galili
ENSHCOG00000010444	si:dkey-17e16.10	96	81.944	ENSNBRG00000007244	si:dkey-17e16.10	100	81.944	Neolamprologus_brichardi
ENSHCOG00000010444	si:dkey-17e16.10	73	72.727	ENSMEUG00000005688	MRPS12	98	72.727	Notamacropus_eugenii
ENSHCOG00000010444	si:dkey-17e16.10	95	68.310	ENSODEG00000016161	MRPS12	97	68.310	Octodon_degus
ENSHCOG00000010444	si:dkey-17e16.10	96	81.944	ENSONIG00000002022	si:dkey-17e16.10	100	81.944	Oreochromis_niloticus
ENSHCOG00000010444	si:dkey-17e16.10	94	68.794	ENSOCUG00000000689	MRPS12	97	68.794	Oryctolagus_cuniculus
ENSHCOG00000010444	si:dkey-17e16.10	85	86.719	ENSORLG00000007040	si:dkey-17e16.10	91	86.719	Oryzias_latipes
ENSHCOG00000010444	si:dkey-17e16.10	85	86.719	ENSORLG00020011268	MRPS12	91	86.719	Oryzias_latipes_hni
ENSHCOG00000010444	si:dkey-17e16.10	85	86.719	ENSORLG00015009378	MRPS12	91	86.719	Oryzias_latipes_hsok
ENSHCOG00000010444	si:dkey-17e16.10	87	86.154	ENSOMEG00000001427	si:dkey-17e16.10	93	86.154	Oryzias_melastigma
ENSHCOG00000010444	si:dkey-17e16.10	95	62.238	ENSOGAG00000025634	-	100	62.238	Otolemur_garnettii
ENSHCOG00000010444	si:dkey-17e16.10	95	68.310	ENSOGAG00000008295	-	97	68.310	Otolemur_garnettii
ENSHCOG00000010444	si:dkey-17e16.10	77	77.586	ENSOARG00000005927	MRPS12	83	77.586	Ovis_aries
ENSHCOG00000010444	si:dkey-17e16.10	93	65.000	ENSPPAG00000041637	MRPS12	96	65.000	Pan_paniscus
ENSHCOG00000010444	si:dkey-17e16.10	95	69.014	ENSPPRG00000011742	MRPS12	97	69.014	Panthera_pardus
ENSHCOG00000010444	si:dkey-17e16.10	59	82.955	ENSPTIG00000008427	MRPS12	76	81.250	Panthera_tigris_altaica
ENSHCOG00000010444	si:dkey-17e16.10	93	65.000	ENSPTRG00000010948	MRPS12	96	65.000	Pan_troglodytes
ENSHCOG00000010444	si:dkey-17e16.10	94	65.957	ENSPANG00000021673	MRPS12	96	65.957	Papio_anubis
ENSHCOG00000010444	si:dkey-17e16.10	89	78.195	ENSPKIG00000006716	si:dkey-17e16.10	93	78.195	Paramormyrops_kingsleyae
ENSHCOG00000010444	si:dkey-17e16.10	77	83.478	ENSPSIG00000014383	MRPS12	75	83.478	Pelodiscus_sinensis
ENSHCOG00000010444	si:dkey-17e16.10	97	79.452	ENSPMGG00000009631	si:dkey-17e16.10	100	79.452	Periophthalmus_magnuspinnatus
ENSHCOG00000010444	si:dkey-17e16.10	76	78.070	ENSPEMG00000016700	Mrps12	82	78.070	Peromyscus_maniculatus_bairdii
ENSHCOG00000010444	si:dkey-17e16.10	72	77.778	ENSPMAG00000008051	si:dkey-17e16.10	70	77.778	Petromyzon_marinus
ENSHCOG00000010444	si:dkey-17e16.10	95	66.197	ENSPCIG00000010531	-	97	66.197	Phascolarctos_cinereus
ENSHCOG00000010444	si:dkey-17e16.10	96	77.778	ENSPFOG00000018863	si:dkey-17e16.10	100	77.778	Poecilia_formosa
ENSHCOG00000010444	si:dkey-17e16.10	96	77.778	ENSPLAG00000008933	si:dkey-17e16.10	100	77.778	Poecilia_latipinna
ENSHCOG00000010444	si:dkey-17e16.10	96	77.083	ENSPMEG00000005155	si:dkey-17e16.10	95	77.083	Poecilia_mexicana
ENSHCOG00000010444	si:dkey-17e16.10	94	78.723	ENSPREG00000014123	si:dkey-17e16.10	95	78.723	Poecilia_reticulata
ENSHCOG00000010444	si:dkey-17e16.10	93	65.000	ENSPPYG00000009950	MRPS12	96	65.000	Pongo_abelii
ENSHCOG00000010444	si:dkey-17e16.10	95	65.493	ENSPCAG00000010853	MRPS12	98	65.493	Procavia_capensis
ENSHCOG00000010444	si:dkey-17e16.10	94	67.376	ENSPCOG00000020370	MRPS12	96	67.376	Propithecus_coquereli
ENSHCOG00000010444	si:dkey-17e16.10	95	64.336	ENSPVAG00000011605	MRPS12	100	64.336	Pteropus_vampyrus
ENSHCOG00000010444	si:dkey-17e16.10	96	81.944	ENSPNYG00000015506	si:dkey-17e16.10	95	81.944	Pundamilia_nyererei
ENSHCOG00000010444	si:dkey-17e16.10	83	81.746	ENSPNAG00000016315	si:dkey-17e16.10	98	72.483	Pygocentrus_nattereri
ENSHCOG00000010444	si:dkey-17e16.10	76	78.070	ENSRNOG00000019949	Mrps12	82	78.070	Rattus_norvegicus
ENSHCOG00000010444	si:dkey-17e16.10	94	65.248	ENSRBIG00000029741	MRPS12	96	65.248	Rhinopithecus_bieti
ENSHCOG00000010444	si:dkey-17e16.10	94	65.248	ENSRROG00000030787	MRPS12	96	65.248	Rhinopithecus_roxellana
ENSHCOG00000010444	si:dkey-17e16.10	94	65.957	ENSSBOG00000025707	MRPS12	96	65.957	Saimiri_boliviensis_boliviensis
ENSHCOG00000010444	si:dkey-17e16.10	89	76.692	ENSSFOG00015018102	mrps12	93	76.692	Scleropages_formosus
ENSHCOG00000010444	si:dkey-17e16.10	96	80.556	ENSSMAG00000004249	si:dkey-17e16.10	100	80.556	Scophthalmus_maximus
ENSHCOG00000010444	si:dkey-17e16.10	97	80.000	ENSSDUG00000020424	si:dkey-17e16.10	99	80.000	Seriola_dumerili
ENSHCOG00000010444	si:dkey-17e16.10	97	80.000	ENSSLDG00000016320	si:dkey-17e16.10	99	80.000	Seriola_lalandi_dorsalis
ENSHCOG00000010444	si:dkey-17e16.10	77	75.862	ENSSARG00000006985	MRPS12	83	75.862	Sorex_araneus
ENSHCOG00000010444	si:dkey-17e16.10	77	79.310	ENSSPUG00000004675	MRPS12	76	79.310	Sphenodon_punctatus
ENSHCOG00000010444	si:dkey-17e16.10	96	81.250	ENSSPAG00000012951	si:dkey-17e16.10	100	81.250	Stegastes_partitus
ENSHCOG00000010444	si:dkey-17e16.10	95	68.310	ENSSSCG00000031860	MRPS12	91	78.448	Sus_scrofa
ENSHCOG00000010444	si:dkey-17e16.10	73	75.455	ENSTGUG00000016491	MRPS12	100	75.455	Taeniopygia_guttata
ENSHCOG00000010444	si:dkey-17e16.10	89	78.195	ENSTRUG00000017342	si:dkey-17e16.10	94	78.195	Takifugu_rubripes
ENSHCOG00000010444	si:dkey-17e16.10	89	76.692	ENSTNIG00000004898	si:dkey-17e16.10	97	76.692	Tetraodon_nigroviridis
ENSHCOG00000010444	si:dkey-17e16.10	94	66.667	ENSTBEG00000001288	MRPS12	96	66.667	Tupaia_belangeri
ENSHCOG00000010444	si:dkey-17e16.10	95	69.014	ENSTTRG00000011794	MRPS12	97	69.014	Tursiops_truncatus
ENSHCOG00000010444	si:dkey-17e16.10	76	77.193	ENSUAMG00000011626	MRPS12	82	77.193	Ursus_americanus
ENSHCOG00000010444	si:dkey-17e16.10	76	78.947	ENSUMAG00000019235	MRPS12	82	78.947	Ursus_maritimus
ENSHCOG00000010444	si:dkey-17e16.10	94	70.213	ENSVVUG00000006433	MRPS12	68	70.213	Vulpes_vulpes
ENSHCOG00000010444	si:dkey-17e16.10	95	69.178	ENSXETG00000005326	mrps12	98	69.178	Xenopus_tropicalis
ENSHCOG00000010444	si:dkey-17e16.10	89	81.343	ENSXCOG00000020766	si:dkey-17e16.10	91	81.343	Xiphophorus_couchianus
ENSHCOG00000010444	si:dkey-17e16.10	89	81.343	ENSXMAG00000027119	si:dkey-17e16.10	94	81.343	Xiphophorus_maculatus