EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000010590 (Gene tree)
Gene ID: 109513636
Gene Symbol: twistnb
Alias: -
Full Name: TWIST neighbor
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 2875 bases
Position: chrKV879862.1:510230-513104
Accession: 109513636
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000022693	SHS2_Rpb7-N	PF03876.17	6.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000000426	-	1758	XM_019866207	ENSHCOP00000022693	414 (aa)	XP_019721766	UPI00094E3D58

Gene Model

Click here to download ENSHCOG00000010590's gene model file

Pathways

Pathway ID	Pathway Name	Source
hcq03020	RNA polymerase	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000010590's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000010590	twistnb	99	58.894	ENSAPOG00000011796	twistnb	99	58.134	Acanthochromis_polyacanthus
ENSHCOG00000010590	twistnb	50	50.943	ENSAMEG00000008558	TWISTNB	52	52.941	Ailuropoda_melanoleuca
ENSHCOG00000010590	twistnb	99	55.610	ENSACIG00000020400	twistnb	96	52.099	Amphilophus_citrinellus
ENSHCOG00000010590	twistnb	99	58.654	ENSAOCG00000024200	twistnb	99	57.857	Amphiprion_ocellaris
ENSHCOG00000010590	twistnb	99	57.933	ENSAPEG00000016750	twistnb	99	57.143	Amphiprion_percula
ENSHCOG00000010590	twistnb	95	56.391	ENSATEG00000017956	twistnb	96	56.824	Anabas_testudineus
ENSHCOG00000010590	twistnb	96	56.030	ENSACLG00000022280	twistnb	89	56.140	Astatotilapia_calliptera
ENSHCOG00000010590	twistnb	54	50.207	ENSCPBG00000000367	TWISTNB	73	50.207	Chrysemys_picta_bellii
ENSHCOG00000010590	twistnb	63	65.283	ENSCVAG00000014324	twistnb	66	67.059	Cyprinodon_variegatus
ENSHCOG00000010590	twistnb	54	56.579	ENSDARG00000024416	twistnb	56	56.277	Danio_rerio
ENSHCOG00000010590	twistnb	99	50.245	ENSELUG00000000098	TWISTNB	64	65.217	Esox_lucius
ENSHCOG00000010590	twistnb	83	36.467	ENSFALG00000009761	TWISTNB	55	53.571	Ficedula_albicollis
ENSHCOG00000010590	twistnb	72	67.340	ENSFHEG00000013318	twistnb	70	69.804	Fundulus_heteroclitus
ENSHCOG00000010590	twistnb	56	72.961	ENSGAFG00000018309	twistnb	68	69.323	Gambusia_affinis
ENSHCOG00000010590	twistnb	61	65.637	ENSGACG00000006425	twistnb	92	62.934	Gasterosteus_aculeatus
ENSHCOG00000010590	twistnb	96	56.030	ENSHBUG00000020155	twistnb	89	56.140	Haplochromis_burtoni
ENSHCOG00000010590	twistnb	56	57.143	ENSIPUG00000004117	twistnb	62	57.143	Ictalurus_punctatus
ENSHCOG00000010590	twistnb	72	64.646	ENSKMAG00000001591	twistnb	80	64.646	Kryptolebias_marmoratus
ENSHCOG00000010590	twistnb	99	39.806	ENSLACG00000010508	TWISTNB	72	48.077	Latimeria_chalumnae
ENSHCOG00000010590	twistnb	96	56.030	ENSMZEG00005007561	twistnb	89	56.140	Maylandia_zebra
ENSHCOG00000010590	twistnb	99	51.574	ENSMMOG00000020085	twistnb	95	51.707	Mola_mola
ENSHCOG00000010590	twistnb	95	50.361	ENSMALG00000016407	twistnb	95	50.478	Monopterus_albus
ENSHCOG00000010590	twistnb	96	53.769	ENSNBRG00000008652	twistnb	95	54.135	Neolamprologus_brichardi
ENSHCOG00000010590	twistnb	96	57.320	ENSORLG00000004005	twistnb	85	56.576	Oryzias_latipes
ENSHCOG00000010590	twistnb	96	55.583	ENSORLG00020002579	twistnb	95	55.087	Oryzias_latipes_hni
ENSHCOG00000010590	twistnb	96	56.858	ENSORLG00015013403	twistnb	85	55.087	Oryzias_latipes_hsok
ENSHCOG00000010590	twistnb	63	53.282	ENSPKIG00000025635	twistnb	68	54.400	Paramormyrops_kingsleyae
ENSHCOG00000010590	twistnb	99	55.690	ENSPMGG00000019023	twistnb	92	54.987	Periophthalmus_magnuspinnatus
ENSHCOG00000010590	twistnb	80	38.554	ENSPCIG00000017456	TWISTNB	51	56.548	Phascolarctos_cinereus
ENSHCOG00000010590	twistnb	96	57.789	ENSPNYG00000002674	twistnb	95	56.140	Pundamilia_nyererei
ENSHCOG00000010590	twistnb	58	50.800	ENSPNAG00000011956	twistnb	66	50.800	Pygocentrus_nattereri
ENSHCOG00000010590	twistnb	76	42.222	ENSRNOG00000010750	Twistnb	90	41.100	Rattus_norvegicus
ENSHCOG00000010590	twistnb	99	57.074	ENSSMAG00000012792	twistnb	95	56.219	Scophthalmus_maximus
ENSHCOG00000010590	twistnb	96	60.599	ENSSDUG00000007038	twistnb	99	58.513	Seriola_dumerili
ENSHCOG00000010590	twistnb	62	71.373	ENSSPAG00000005871	twistnb	99	54.722	Stegastes_partitus
ENSHCOG00000010590	twistnb	86	52.793	ENSTNIG00000017778	twistnb	63	68.519	Tetraodon_nigroviridis
ENSHCOG00000010590	twistnb	61	69.291	ENSXCOG00000020199	twistnb	70	69.291	Xiphophorus_couchianus