EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000010618 (Gene tree)
Gene ID: 109521584
Gene Symbol: trnt1
Alias: zgc:86645
Full Name: tRNA nucleotidyl transferase 1
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 6896 bases
Position: chrKV880111.1:2309784-2316679
Accession: 109521584
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000008382	PolyA_pol	PF01743.20	1.7e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000000398	-	4023	XM_019879506	ENSHCOP00000008382	427 (aa)	XP_019735065	UPI00094F0CE5

Gene Model

Click here to download ENSHCOG00000010618's gene model file

Pathways

Pathway ID	Pathway Name	Source
hcq03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000010618's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000010618	trnt1	95	67.241	ENSG00000072756	TRNT1	94	67.241	Homo_sapiens
ENSHCOG00000010618	trnt1	99	78.588	ENSAPOG00000013687	trnt1	99	78.588	Acanthochromis_polyacanthus
ENSHCOG00000010618	trnt1	99	64.169	ENSAMEG00000014520	TRNT1	98	64.169	Ailuropoda_melanoleuca
ENSHCOG00000010618	trnt1	100	79.391	ENSACIG00000021706	trnt1	100	79.391	Amphilophus_citrinellus
ENSHCOG00000010618	trnt1	100	78.923	ENSAOCG00000024612	trnt1	100	78.923	Amphiprion_ocellaris
ENSHCOG00000010618	trnt1	96	71.776	ENSAPEG00000022627	trnt1	95	71.776	Amphiprion_percula
ENSHCOG00000010618	trnt1	95	81.931	ENSATEG00000008928	trnt1	100	81.931	Anabas_testudineus
ENSHCOG00000010618	trnt1	94	64.764	ENSAPLG00000004258	TRNT1	99	64.764	Anas_platyrhynchos
ENSHCOG00000010618	trnt1	96	65.281	ENSACAG00000005657	TRNT1	93	65.281	Anolis_carolinensis
ENSHCOG00000010618	trnt1	95	66.995	ENSANAG00000024802	TRNT1	94	66.995	Aotus_nancymaae
ENSHCOG00000010618	trnt1	99	78.169	ENSACLG00000022227	trnt1	99	78.169	Astatotilapia_calliptera
ENSHCOG00000010618	trnt1	99	72.196	ENSAMXG00000003960	trnt1	99	72.196	Astyanax_mexicanus
ENSHCOG00000010618	trnt1	95	66.093	ENSBTAG00000019534	TRNT1	94	66.093	Bos_taurus
ENSHCOG00000010618	trnt1	94	44.769	WBGene00010089	hpo-31	93	44.769	Caenorhabditis_elegans
ENSHCOG00000010618	trnt1	95	66.995	ENSCJAG00000015466	TRNT1	94	66.995	Callithrix_jacchus
ENSHCOG00000010618	trnt1	99	65.882	ENSCAFG00000005985	TRNT1	97	65.882	Canis_familiaris
ENSHCOG00000010618	trnt1	99	65.882	ENSCAFG00020014746	TRNT1	97	65.882	Canis_lupus_dingo
ENSHCOG00000010618	trnt1	95	66.585	ENSCHIG00000007030	TRNT1	93	66.585	Capra_hircus
ENSHCOG00000010618	trnt1	95	68.227	ENSTSYG00000013390	TRNT1	94	68.227	Carlito_syrichta
ENSHCOG00000010618	trnt1	88	54.111	ENSCAPG00000006891	TRNT1	99	54.111	Cavia_aperea
ENSHCOG00000010618	trnt1	95	67.241	ENSCPOG00000007849	TRNT1	94	67.241	Cavia_porcellus
ENSHCOG00000010618	trnt1	95	65.122	ENSCCAG00000002919	TRNT1	99	65.122	Cebus_capucinus
ENSHCOG00000010618	trnt1	95	67.980	ENSCATG00000031985	TRNT1	92	67.980	Cercocebus_atys
ENSHCOG00000010618	trnt1	99	65.176	ENSCLAG00000005186	TRNT1	92	75.000	Chinchilla_lanigera
ENSHCOG00000010618	trnt1	95	67.980	ENSCSAG00000011052	TRNT1	94	67.980	Chlorocebus_sabaeus
ENSHCOG00000010618	trnt1	80	80.114	ENSCHOG00000005712	TRNT1	78	80.114	Choloepus_hoffmanni
ENSHCOG00000010618	trnt1	96	66.667	ENSCPBG00000017636	TRNT1	93	66.667	Chrysemys_picta_bellii
ENSHCOG00000010618	trnt1	95	40.000	ENSCING00000007069	-	99	40.000	Ciona_intestinalis
ENSHCOG00000010618	trnt1	94	42.752	ENSCSAVG00000007494	-	95	42.752	Ciona_savignyi
ENSHCOG00000010618	trnt1	95	67.980	ENSCANG00000039030	TRNT1	94	67.980	Colobus_angolensis_palliatus
ENSHCOG00000010618	trnt1	96	67.892	ENSCGRG00001009998	Trnt1	94	67.892	Cricetulus_griseus_chok1gshd
ENSHCOG00000010618	trnt1	96	67.892	ENSCGRG00000013410	Trnt1	87	79.348	Cricetulus_griseus_crigri
ENSHCOG00000010618	trnt1	99	77.934	ENSCSEG00000008157	trnt1	99	77.934	Cynoglossus_semilaevis
ENSHCOG00000010618	trnt1	100	77.752	ENSCVAG00000019770	trnt1	100	77.752	Cyprinodon_variegatus
ENSHCOG00000010618	trnt1	99	72.770	ENSDARG00000075297	trnt1	99	72.770	Danio_rerio
ENSHCOG00000010618	trnt1	96	67.402	ENSDNOG00000008837	TRNT1	94	67.402	Dasypus_novemcinctus
ENSHCOG00000010618	trnt1	96	67.647	ENSDORG00000014035	Trnt1	94	67.647	Dipodomys_ordii
ENSHCOG00000010618	trnt1	94	49.755	FBgn0037369	CG2100	84	49.755	Drosophila_melanogaster
ENSHCOG00000010618	trnt1	56	72.614	ENSETEG00000018177	TRNT1	97	72.614	Echinops_telfairi
ENSHCOG00000010618	trnt1	99	60.000	ENSEBUG00000012779	-	99	60.000	Eptatretus_burgeri
ENSHCOG00000010618	trnt1	95	67.734	ENSEASG00005003577	TRNT1	94	67.734	Equus_asinus_asinus
ENSHCOG00000010618	trnt1	95	67.980	ENSECAG00000014420	TRNT1	94	67.980	Equus_caballus
ENSHCOG00000010618	trnt1	96	66.912	ENSEEUG00000009567	TRNT1	94	66.912	Erinaceus_europaeus
ENSHCOG00000010618	trnt1	99	74.533	ENSELUG00000003802	trnt1	99	74.533	Esox_lucius
ENSHCOG00000010618	trnt1	95	67.488	ENSFCAG00000026805	TRNT1	93	67.488	Felis_catus
ENSHCOG00000010618	trnt1	90	67.102	ENSFALG00000013539	TRNT1	99	67.102	Ficedula_albicollis
ENSHCOG00000010618	trnt1	95	67.734	ENSFDAG00000018412	TRNT1	82	80.226	Fukomys_damarensis
ENSHCOG00000010618	trnt1	100	77.283	ENSFHEG00000019294	trnt1	100	77.283	Fundulus_heteroclitus
ENSHCOG00000010618	trnt1	95	76.658	ENSGMOG00000007460	trnt1	96	76.658	Gadus_morhua
ENSHCOG00000010618	trnt1	99	63.488	ENSGALG00000017368	TRNT1	99	63.488	Gallus_gallus
ENSHCOG00000010618	trnt1	99	77.230	ENSGAFG00000008647	trnt1	99	77.230	Gambusia_affinis
ENSHCOG00000010618	trnt1	100	78.220	ENSGACG00000011903	trnt1	100	78.220	Gasterosteus_aculeatus
ENSHCOG00000010618	trnt1	96	67.402	ENSGAGG00000020942	TRNT1	93	67.402	Gopherus_agassizii
ENSHCOG00000010618	trnt1	95	67.488	ENSGGOG00000015286	TRNT1	94	67.488	Gorilla_gorilla
ENSHCOG00000010618	trnt1	99	78.404	ENSHBUG00000002797	trnt1	99	78.404	Haplochromis_burtoni
ENSHCOG00000010618	trnt1	96	66.912	ENSHGLG00000003649	TRNT1	94	66.912	Heterocephalus_glaber_female
ENSHCOG00000010618	trnt1	95	62.899	ENSHGLG00000000221	-	94	62.899	Heterocephalus_glaber_female
ENSHCOG00000010618	trnt1	96	65.686	ENSHGLG00100016421	TRNT1	94	65.686	Heterocephalus_glaber_male
ENSHCOG00000010618	trnt1	99	72.897	ENSIPUG00000000971	trnt1	99	72.897	Ictalurus_punctatus
ENSHCOG00000010618	trnt1	96	66.912	ENSSTOG00000000150	TRNT1	86	81.006	Ictidomys_tridecemlineatus
ENSHCOG00000010618	trnt1	96	67.647	ENSJJAG00000018561	Trnt1	94	67.647	Jaculus_jaculus
ENSHCOG00000010618	trnt1	99	77.986	ENSKMAG00000011307	trnt1	99	77.986	Kryptolebias_marmoratus
ENSHCOG00000010618	trnt1	96	73.479	ENSLBEG00000019457	trnt1	97	73.479	Labrus_bergylta
ENSHCOG00000010618	trnt1	95	70.025	ENSLACG00000013227	TRNT1	94	70.025	Latimeria_chalumnae
ENSHCOG00000010618	trnt1	99	71.096	ENSLOCG00000011105	trnt1	98	71.096	Lepisosteus_oculatus
ENSHCOG00000010618	trnt1	95	68.473	ENSLAFG00000023191	TRNT1	94	68.473	Loxodonta_africana
ENSHCOG00000010618	trnt1	95	67.980	ENSMFAG00000045113	TRNT1	92	67.980	Macaca_fascicularis
ENSHCOG00000010618	trnt1	95	67.980	ENSMMUG00000017983	TRNT1	92	67.980	Macaca_mulatta
ENSHCOG00000010618	trnt1	95	67.980	ENSMNEG00000037805	TRNT1	92	67.980	Macaca_nemestrina
ENSHCOG00000010618	trnt1	89	68.063	ENSMLEG00000033671	TRNT1	99	68.063	Mandrillus_leucophaeus
ENSHCOG00000010618	trnt1	100	79.859	ENSMAMG00000023401	trnt1	100	79.859	Mastacembelus_armatus
ENSHCOG00000010618	trnt1	99	78.169	ENSMZEG00005009141	trnt1	99	78.169	Maylandia_zebra
ENSHCOG00000010618	trnt1	75	64.577	ENSMGAG00000009971	TRNT1	99	64.577	Meleagris_gallopavo
ENSHCOG00000010618	trnt1	96	67.892	ENSMAUG00000020707	Trnt1	94	67.892	Mesocricetus_auratus
ENSHCOG00000010618	trnt1	96	68.627	ENSMICG00000016615	TRNT1	94	68.627	Microcebus_murinus
ENSHCOG00000010618	trnt1	96	67.157	ENSMOCG00000004539	Trnt1	94	67.157	Microtus_ochrogaster
ENSHCOG00000010618	trnt1	100	76.347	ENSMMOG00000010742	trnt1	100	76.347	Mola_mola
ENSHCOG00000010618	trnt1	96	66.912	ENSMODG00000004368	TRNT1	94	66.912	Monodelphis_domestica
ENSHCOG00000010618	trnt1	100	75.878	ENSMALG00000008376	trnt1	99	75.878	Monopterus_albus
ENSHCOG00000010618	trnt1	96	67.892	MGP_CAROLIEiJ_G0028698	Trnt1	90	74.590	Mus_caroli
ENSHCOG00000010618	trnt1	96	67.647	ENSMUSG00000013736	Trnt1	83	81.564	Mus_musculus
ENSHCOG00000010618	trnt1	96	67.892	MGP_PahariEiJ_G0022449	Trnt1	88	82.682	Mus_pahari
ENSHCOG00000010618	trnt1	96	67.892	MGP_SPRETEiJ_G0029726	Trnt1	83	81.564	Mus_spretus
ENSHCOG00000010618	trnt1	99	65.176	ENSMPUG00000017017	TRNT1	97	65.176	Mustela_putorius_furo
ENSHCOG00000010618	trnt1	90	67.188	ENSMLUG00000011864	TRNT1	99	67.188	Myotis_lucifugus
ENSHCOG00000010618	trnt1	97	66.425	ENSNGAG00000000537	Trnt1	85	77.957	Nannospalax_galili
ENSHCOG00000010618	trnt1	81	78.324	ENSNBRG00000023606	trnt1	99	78.324	Neolamprologus_brichardi
ENSHCOG00000010618	trnt1	95	67.734	ENSNLEG00000003226	TRNT1	94	67.734	Nomascus_leucogenys
ENSHCOG00000010618	trnt1	96	66.667	ENSMEUG00000004684	TRNT1	94	66.667	Notamacropus_eugenii
ENSHCOG00000010618	trnt1	89	62.992	ENSOPRG00000015067	TRNT1	99	62.992	Ochotona_princeps
ENSHCOG00000010618	trnt1	95	67.734	ENSODEG00000007597	TRNT1	94	67.734	Octodon_degus
ENSHCOG00000010618	trnt1	99	78.638	ENSONIG00000020273	trnt1	98	78.638	Oreochromis_niloticus
ENSHCOG00000010618	trnt1	95	64.619	ENSOANG00000007514	TRNT1	94	64.619	Ornithorhynchus_anatinus
ENSHCOG00000010618	trnt1	96	65.693	ENSOCUG00000008580	TRNT1	95	65.693	Oryctolagus_cuniculus
ENSHCOG00000010618	trnt1	99	73.239	ENSORLG00000003165	trnt1	99	73.239	Oryzias_latipes
ENSHCOG00000010618	trnt1	99	72.770	ENSORLG00020022060	trnt1	99	72.770	Oryzias_latipes_hni
ENSHCOG00000010618	trnt1	99	73.005	ENSORLG00015018915	trnt1	99	73.005	Oryzias_latipes_hsok
ENSHCOG00000010618	trnt1	96	75.490	ENSOMEG00000003331	trnt1	96	75.490	Oryzias_melastigma
ENSHCOG00000010618	trnt1	95	66.585	ENSOARG00000008631	TRNT1	93	66.585	Ovis_aries
ENSHCOG00000010618	trnt1	95	67.488	ENSPPAG00000043566	TRNT1	94	67.488	Pan_paniscus
ENSHCOG00000010618	trnt1	99	65.176	ENSPPRG00000001327	TRNT1	97	65.176	Panthera_pardus
ENSHCOG00000010618	trnt1	95	67.734	ENSPTIG00000011448	TRNT1	93	67.734	Panthera_tigris_altaica
ENSHCOG00000010618	trnt1	95	67.241	ENSPTRG00000014564	TRNT1	94	67.241	Pan_troglodytes
ENSHCOG00000010618	trnt1	95	67.980	ENSPANG00000025944	TRNT1	92	67.980	Papio_anubis
ENSHCOG00000010618	trnt1	99	72.897	ENSPKIG00000020015	trnt1	99	72.897	Paramormyrops_kingsleyae
ENSHCOG00000010618	trnt1	93	67.595	ENSPSIG00000017356	TRNT1	99	68.245	Pelodiscus_sinensis
ENSHCOG00000010618	trnt1	100	78.454	ENSPMGG00000008888	trnt1	99	78.454	Periophthalmus_magnuspinnatus
ENSHCOG00000010618	trnt1	96	67.892	ENSPEMG00000019845	Trnt1	94	67.892	Peromyscus_maniculatus_bairdii
ENSHCOG00000010618	trnt1	96	67.157	ENSPCIG00000030436	TRNT1	94	67.157	Phascolarctos_cinereus
ENSHCOG00000010618	trnt1	99	76.540	ENSPFOG00000006194	trnt1	98	76.540	Poecilia_formosa
ENSHCOG00000010618	trnt1	99	76.540	ENSPLAG00000015623	trnt1	99	77.916	Poecilia_latipinna
ENSHCOG00000010618	trnt1	99	76.303	ENSPMEG00000012216	trnt1	99	77.667	Poecilia_mexicana
ENSHCOG00000010618	trnt1	99	76.056	ENSPREG00000021470	trnt1	99	76.056	Poecilia_reticulata
ENSHCOG00000010618	trnt1	96	66.912	ENSPPYG00000013702	TRNT1	94	66.912	Pongo_abelii
ENSHCOG00000010618	trnt1	89	69.554	ENSPCAG00000001951	TRNT1	99	69.554	Procavia_capensis
ENSHCOG00000010618	trnt1	95	68.473	ENSPCOG00000022228	TRNT1	94	68.473	Propithecus_coquereli
ENSHCOG00000010618	trnt1	89	66.404	ENSPVAG00000008784	TRNT1	99	66.404	Pteropus_vampyrus
ENSHCOG00000010618	trnt1	99	77.700	ENSPNYG00000003120	trnt1	99	77.700	Pundamilia_nyererei
ENSHCOG00000010618	trnt1	99	74.533	ENSPNAG00000000565	trnt1	99	74.533	Pygocentrus_nattereri
ENSHCOG00000010618	trnt1	96	68.627	ENSRNOG00000006432	Trnt1	94	68.627	Rattus_norvegicus
ENSHCOG00000010618	trnt1	95	66.502	ENSRBIG00000042632	TRNT1	93	66.502	Rhinopithecus_bieti
ENSHCOG00000010618	trnt1	95	67.734	ENSRROG00000036866	TRNT1	94	67.734	Rhinopithecus_roxellana
ENSHCOG00000010618	trnt1	95	66.995	ENSSBOG00000021208	TRNT1	94	66.995	Saimiri_boliviensis_boliviensis
ENSHCOG00000010618	trnt1	95	66.995	ENSSHAG00000018861	TRNT1	94	66.995	Sarcophilus_harrisii
ENSHCOG00000010618	trnt1	99	72.261	ENSSFOG00015020844	trnt1	99	72.261	Scleropages_formosus
ENSHCOG00000010618	trnt1	100	76.347	ENSSMAG00000015432	trnt1	98	76.347	Scophthalmus_maximus
ENSHCOG00000010618	trnt1	99	79.343	ENSSDUG00000012320	trnt1	100	79.343	Seriola_dumerili
ENSHCOG00000010618	trnt1	99	79.108	ENSSLDG00000009325	trnt1	100	79.108	Seriola_lalandi_dorsalis
ENSHCOG00000010618	trnt1	56	77.824	ENSSLDG00000016463	-	91	77.824	Seriola_lalandi_dorsalis
ENSHCOG00000010618	trnt1	89	68.766	ENSSPUG00000014153	TRNT1	99	68.766	Sphenodon_punctatus
ENSHCOG00000010618	trnt1	99	78.873	ENSSPAG00000021005	trnt1	99	78.873	Stegastes_partitus
ENSHCOG00000010618	trnt1	95	68.227	ENSSSCG00000011529	TRNT1	94	68.227	Sus_scrofa
ENSHCOG00000010618	trnt1	95	66.337	ENSTGUG00000010192	TRNT1	99	66.337	Taeniopygia_guttata
ENSHCOG00000010618	trnt1	100	76.581	ENSTRUG00000001088	trnt1	100	76.581	Takifugu_rubripes
ENSHCOG00000010618	trnt1	100	74.707	ENSTNIG00000007363	trnt1	98	74.707	Tetraodon_nigroviridis
ENSHCOG00000010618	trnt1	61	56.538	ENSTBEG00000006367	TRNT1	86	56.538	Tupaia_belangeri
ENSHCOG00000010618	trnt1	95	66.830	ENSTTRG00000007803	TRNT1	94	66.830	Tursiops_truncatus
ENSHCOG00000010618	trnt1	99	64.941	ENSUAMG00000022574	TRNT1	97	64.941	Ursus_americanus
ENSHCOG00000010618	trnt1	99	64.706	ENSUMAG00000024092	TRNT1	97	64.706	Ursus_maritimus
ENSHCOG00000010618	trnt1	99	65.882	ENSVVUG00000012810	TRNT1	97	65.882	Vulpes_vulpes
ENSHCOG00000010618	trnt1	95	60.880	ENSXETG00000025091	trnt1	99	61.194	Xenopus_tropicalis
ENSHCOG00000010618	trnt1	99	76.056	ENSXCOG00000010150	trnt1	99	76.056	Xiphophorus_couchianus
ENSHCOG00000010618	trnt1	99	76.761	ENSXMAG00000002227	trnt1	99	76.761	Xiphophorus_maculatus