EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000010749 (Gene tree)
Gene ID: 109512869
Gene Symbol: srpra
Alias: id:ibd1064|srpr|wu:fd12f02
Full Name: SRP receptor subunit alpha
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 6245 bases
Position: chrKV879834.1:1649559-1655803
Accession: 109512869
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000022752	SRP54	PF00448.22	2.4e-48	1	1
ENSHCOP00000022755	SRP54	PF00448.22	3.2e-48	1	1
ENSHCOP00000022755	SRP54_N	PF02881.19	2e-09	1	1
ENSHCOP00000022752	SRP54_N	PF02881.19	2e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000000247	-	3342	XM_019864929	ENSHCOP00000022755	652 (aa)	XP_019720488	UPI00094E7CB0
ENSHCOT00000000258	-	1755	-	ENSHCOP00000022752	584 (aa)	-	-

Gene Model

Click here to download ENSHCOG00000010749's gene model file

Pathways

Pathway ID	Pathway Name	Source
hcq03060	Protein export	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000010749's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000010749	srpra	100	67.761	ENSG00000182934	SRPRA	100	68.120	Homo_sapiens
ENSHCOG00000010749	srpra	100	87.749	ENSAPOG00000017588	srpra	100	87.443	Acanthochromis_polyacanthus
ENSHCOG00000010749	srpra	100	68.533	ENSAMEG00000000117	SRPRA	100	66.967	Ailuropoda_melanoleuca
ENSHCOG00000010749	srpra	100	83.461	ENSACIG00000021588	srpra	100	83.155	Amphilophus_citrinellus
ENSHCOG00000010749	srpra	100	87.596	ENSAOCG00000018884	srpra	100	87.289	Amphiprion_ocellaris
ENSHCOG00000010749	srpra	100	87.596	ENSAPEG00000022286	srpra	100	85.596	Amphiprion_percula
ENSHCOG00000010749	srpra	100	84.427	ENSATEG00000023578	srpra	95	95.441	Anabas_testudineus
ENSHCOG00000010749	srpra	94	69.256	ENSAPLG00000016079	SRPRA	99	69.579	Anas_platyrhynchos
ENSHCOG00000010749	srpra	100	70.427	ENSACAG00000000108	SRPRA	100	69.651	Anolis_carolinensis
ENSHCOG00000010749	srpra	100	68.533	ENSANAG00000020346	SRPRA	100	68.127	Aotus_nancymaae
ENSHCOG00000010749	srpra	100	84.227	ENSACLG00000000518	srpra	100	83.920	Astatotilapia_calliptera
ENSHCOG00000010749	srpra	100	71.626	ENSAMXG00000009975	srpra	100	70.626	Astyanax_mexicanus
ENSHCOG00000010749	srpra	100	68.285	ENSBTAG00000014105	SRPRA	100	68.285	Bos_taurus
ENSHCOG00000010749	srpra	99	49.371	WBGene00009521	F38A1.8	99	49.447	Caenorhabditis_elegans
ENSHCOG00000010749	srpra	100	68.533	ENSCJAG00000008752	SRPRA	100	68.127	Callithrix_jacchus
ENSHCOG00000010749	srpra	100	67.021	ENSCAFG00000010474	SRPRA	100	66.768	Canis_familiaris
ENSHCOG00000010749	srpra	100	68.693	ENSCAFG00020010608	SRPRA	100	68.437	Canis_lupus_dingo
ENSHCOG00000010749	srpra	100	68.589	ENSCHIG00000012423	SRPRA	100	67.678	Capra_hircus
ENSHCOG00000010749	srpra	100	70.034	ENSTSYG00000005187	SRPRA	91	87.619	Carlito_syrichta
ENSHCOG00000010749	srpra	94	67.647	ENSCAPG00000007098	SRPRA	91	90.226	Cavia_aperea
ENSHCOG00000010749	srpra	100	68.079	ENSCPOG00000014976	SRPRA	91	90.226	Cavia_porcellus
ENSHCOG00000010749	srpra	100	68.175	ENSCCAG00000025602	SRPRA	100	66.716	Cebus_capucinus
ENSHCOG00000010749	srpra	100	68.997	ENSCATG00000039354	SRPRA	100	67.933	Cercocebus_atys
ENSHCOG00000010749	srpra	100	67.761	ENSCLAG00000016839	SRPRA	100	68.278	Chinchilla_lanigera
ENSHCOG00000010749	srpra	100	68.845	ENSCSAG00000002271	SRPRA	100	68.437	Chlorocebus_sabaeus
ENSHCOG00000010749	srpra	54	88.265	ENSCHOG00000010015	-	73	88.265	Choloepus_hoffmanni
ENSHCOG00000010749	srpra	100	67.171	ENSCPBG00000011128	SRPRA	100	69.138	Chrysemys_picta_bellii
ENSHCOG00000010749	srpra	99	58.055	ENSCING00000008954	-	100	58.207	Ciona_intestinalis
ENSHCOG00000010749	srpra	99	58.931	ENSCSAVG00000005602	-	100	58.556	Ciona_savignyi
ENSHCOG00000010749	srpra	100	68.684	ENSCANG00000032337	SRPRA	100	67.322	Colobus_angolensis_palliatus
ENSHCOG00000010749	srpra	100	68.182	ENSCGRG00001017670	Srpr	100	67.273	Cricetulus_griseus_chok1gshd
ENSHCOG00000010749	srpra	100	68.182	ENSCGRG00000009892	Srpr	90	90.370	Cricetulus_griseus_crigri
ENSHCOG00000010749	srpra	100	84.202	ENSCSEG00000002374	srpra	100	84.202	Cynoglossus_semilaevis
ENSHCOG00000010749	srpra	100	83.817	ENSCVAG00000019881	srpra	100	83.817	Cyprinodon_variegatus
ENSHCOG00000010749	srpra	100	77.930	ENSDARG00000061124	srpra	100	77.017	Danio_rerio
ENSHCOG00000010749	srpra	100	68.120	ENSDNOG00000010821	SRPRA	100	67.218	Dasypus_novemcinctus
ENSHCOG00000010749	srpra	100	68.835	ENSDORG00000016719	Srpr	100	68.429	Dipodomys_ordii
ENSHCOG00000010749	srpra	99	53.343	FBgn0010391	Gtp-bp	100	53.514	Drosophila_melanogaster
ENSHCOG00000010749	srpra	100	67.879	ENSETEG00000013956	SRPRA	100	66.515	Echinops_telfairi
ENSHCOG00000010749	srpra	55	83.025	ENSEBUG00000002602	srpra	94	70.773	Eptatretus_burgeri
ENSHCOG00000010749	srpra	100	68.741	ENSEASG00005022980	SRPRA	100	67.678	Equus_asinus_asinus
ENSHCOG00000010749	srpra	100	68.741	ENSECAG00000014692	SRPRA	100	67.678	Equus_caballus
ENSHCOG00000010749	srpra	100	63.110	ENSEEUG00000007920	SRPRA	100	63.110	Erinaceus_europaeus
ENSHCOG00000010749	srpra	100	82.137	ENSELUG00000017643	srpra	100	82.137	Esox_lucius
ENSHCOG00000010749	srpra	80	63.039	ENSFCAG00000030894	-	99	61.726	Felis_catus
ENSHCOG00000010749	srpra	100	68.684	ENSFCAG00000011274	-	100	67.625	Felis_catus
ENSHCOG00000010749	srpra	99	66.565	ENSFALG00000005048	SRPRA	99	66.565	Ficedula_albicollis
ENSHCOG00000010749	srpra	100	67.910	ENSFDAG00000016229	SRPRA	92	85.315	Fukomys_damarensis
ENSHCOG00000010749	srpra	100	84.686	ENSFHEG00000016959	srpra	100	84.686	Fundulus_heteroclitus
ENSHCOG00000010749	srpra	100	79.969	ENSGMOG00000013244	srpra	100	79.908	Gadus_morhua
ENSHCOG00000010749	srpra	100	69.044	ENSGALG00000030759	SRPRA	100	69.499	Gallus_gallus
ENSHCOG00000010749	srpra	100	84.992	ENSGAFG00000000453	srpra	100	85.452	Gambusia_affinis
ENSHCOG00000010749	srpra	100	82.927	ENSGACG00000006550	srpra	100	82.927	Gasterosteus_aculeatus
ENSHCOG00000010749	srpra	100	67.322	ENSGAGG00000021157	SRPRA	100	69.289	Gopherus_agassizii
ENSHCOG00000010749	srpra	100	67.761	ENSGGOG00000012962	SRPRA	100	68.120	Gorilla_gorilla
ENSHCOG00000010749	srpra	100	84.074	ENSHBUG00000000119	srpra	100	83.767	Haplochromis_burtoni
ENSHCOG00000010749	srpra	100	68.835	ENSHGLG00000001597	SRPR	94	90.909	Heterocephalus_glaber_female
ENSHCOG00000010749	srpra	100	68.835	ENSHGLG00100006449	SRPR	94	90.909	Heterocephalus_glaber_male
ENSHCOG00000010749	srpra	94	73.864	ENSIPUG00000000867	srpra	99	72.890	Ictalurus_punctatus
ENSHCOG00000010749	srpra	100	68.333	ENSSTOG00000009897	SRPRA	100	67.927	Ictidomys_tridecemlineatus
ENSHCOG00000010749	srpra	100	67.463	ENSJJAG00000020272	Srpr	100	67.625	Jaculus_jaculus
ENSHCOG00000010749	srpra	100	85.605	ENSKMAG00000002280	srpra	100	85.452	Kryptolebias_marmoratus
ENSHCOG00000010749	srpra	100	85.780	ENSLBEG00000009608	srpra	100	85.780	Labrus_bergylta
ENSHCOG00000010749	srpra	94	76.980	ENSLACG00000017781	SRPRA	100	70.703	Latimeria_chalumnae
ENSHCOG00000010749	srpra	100	75.380	ENSLOCG00000002733	srpra	100	74.545	Lepisosteus_oculatus
ENSHCOG00000010749	srpra	100	67.223	ENSLAFG00000010252	SRPRA	100	68.333	Loxodonta_africana
ENSHCOG00000010749	srpra	100	68.997	ENSMFAG00000032606	SRPRA	100	68.589	Macaca_fascicularis
ENSHCOG00000010749	srpra	100	68.997	ENSMMUG00000007938	SRPRA	100	68.589	Macaca_mulatta
ENSHCOG00000010749	srpra	100	68.997	ENSMNEG00000030709	SRPRA	100	68.589	Macaca_nemestrina
ENSHCOG00000010749	srpra	100	68.997	ENSMLEG00000043404	SRPRA	100	67.933	Mandrillus_leucophaeus
ENSHCOG00000010749	srpra	100	83.461	ENSMAMG00000000473	srpra	100	83.767	Mastacembelus_armatus
ENSHCOG00000010749	srpra	100	84.227	ENSMZEG00005013432	srpra	100	83.920	Maylandia_zebra
ENSHCOG00000010749	srpra	94	68.226	ENSMGAG00000000732	SRPRA	100	69.144	Meleagris_gallopavo
ENSHCOG00000010749	srpra	100	67.612	ENSMAUG00000015648	Srpr	100	67.927	Mesocricetus_auratus
ENSHCOG00000010749	srpra	100	68.693	ENSMICG00000015981	SRPRA	100	67.976	Microcebus_murinus
ENSHCOG00000010749	srpra	100	67.879	ENSMOCG00000008311	Srpr	100	66.970	Microtus_ochrogaster
ENSHCOG00000010749	srpra	100	82.391	ENSMMOG00000005019	srpra	100	82.391	Mola_mola
ENSHCOG00000010749	srpra	100	68.950	ENSMODG00000004576	-	100	68.037	Monodelphis_domestica
ENSHCOG00000010749	srpra	100	85.911	ENSMALG00000011343	srpra	100	85.605	Monopterus_albus
ENSHCOG00000010749	srpra	100	67.761	MGP_CAROLIEiJ_G0031951	Srpr	86	91.667	Mus_caroli
ENSHCOG00000010749	srpra	100	67.665	ENSMUSG00000032042	Srpr	86	90.909	Mus_musculus
ENSHCOG00000010749	srpra	100	67.313	MGP_PahariEiJ_G0014816	Srpr	86	90.909	Mus_pahari
ENSHCOG00000010749	srpra	95	82.759	MGP_SPRETEiJ_G0033075	Srpr	100	63.689	Mus_spretus
ENSHCOG00000010749	srpra	100	68.485	ENSMPUG00000006626	SRPRA	100	68.230	Mustela_putorius_furo
ENSHCOG00000010749	srpra	100	68.293	ENSMLUG00000017334	SRPRA	100	67.226	Myotis_lucifugus
ENSHCOG00000010749	srpra	100	67.463	ENSNGAG00000015686	Srpr	100	67.776	Nannospalax_galili
ENSHCOG00000010749	srpra	100	83.767	ENSNBRG00000017311	srpra	100	83.461	Neolamprologus_brichardi
ENSHCOG00000010749	srpra	99	64.414	ENSNLEG00000007467	SRPRA	100	67.508	Nomascus_leucogenys
ENSHCOG00000010749	srpra	94	67.909	ENSMEUG00000004956	SRPRA	100	66.937	Notamacropus_eugenii
ENSHCOG00000010749	srpra	100	64.776	ENSOPRG00000013160	SRPRA	100	64.307	Ochotona_princeps
ENSHCOG00000010749	srpra	100	67.216	ENSODEG00000004730	SRPRA	100	67.265	Octodon_degus
ENSHCOG00000010749	srpra	100	83.767	ENSONIG00000005324	srpra	100	83.461	Oreochromis_niloticus
ENSHCOG00000010749	srpra	100	68.693	ENSOCUG00000017057	SRPRA	100	68.127	Oryctolagus_cuniculus
ENSHCOG00000010749	srpra	100	81.902	ENSORLG00000014676	srpra	100	81.442	Oryzias_latipes
ENSHCOG00000010749	srpra	100	82.055	ENSORLG00020009240	srpra	100	81.595	Oryzias_latipes_hni
ENSHCOG00000010749	srpra	100	81.902	ENSORLG00015015405	srpra	100	81.442	Oryzias_latipes_hsok
ENSHCOG00000010749	srpra	100	82.975	ENSOMEG00000005872	srpra	100	82.515	Oryzias_melastigma
ENSHCOG00000010749	srpra	100	69.033	ENSOGAG00000008926	SRPRA	100	67.976	Otolemur_garnettii
ENSHCOG00000010749	srpra	100	65.099	ENSOARG00000012397	SRPRA	100	65.250	Ovis_aries
ENSHCOG00000010749	srpra	100	67.761	ENSPPAG00000030813	SRPRA	100	68.120	Pan_paniscus
ENSHCOG00000010749	srpra	100	68.684	ENSPPRG00000001542	SRPRA	100	67.625	Panthera_pardus
ENSHCOG00000010749	srpra	100	68.533	ENSPTIG00000006989	SRPRA	100	67.474	Panthera_tigris_altaica
ENSHCOG00000010749	srpra	100	67.761	ENSPTRG00000028360	SRPRA	100	68.120	Pan_troglodytes
ENSHCOG00000010749	srpra	100	68.997	ENSPANG00000010858	SRPRA	100	68.589	Papio_anubis
ENSHCOG00000010749	srpra	100	76.596	ENSPKIG00000016106	srpra	100	76.596	Paramormyrops_kingsleyae
ENSHCOG00000010749	srpra	94	69.305	ENSPSIG00000012009	SRPRA	100	68.336	Pelodiscus_sinensis
ENSHCOG00000010749	srpra	100	79.389	ENSPMGG00000001393	srpra	100	80.611	Periophthalmus_magnuspinnatus
ENSHCOG00000010749	srpra	100	68.030	ENSPEMG00000018279	Srpr	100	67.121	Peromyscus_maniculatus_bairdii
ENSHCOG00000010749	srpra	99	61.187	ENSPMAG00000009559	srpra	99	61.854	Petromyzon_marinus
ENSHCOG00000010749	srpra	100	68.085	ENSPCIG00000010207	SRPRA	100	68.134	Phascolarctos_cinereus
ENSHCOG00000010749	srpra	100	85.605	ENSPFOG00000003114	srpra	100	85.299	Poecilia_formosa
ENSHCOG00000010749	srpra	100	85.605	ENSPLAG00000007323	srpra	100	85.378	Poecilia_latipinna
ENSHCOG00000010749	srpra	100	85.452	ENSPMEG00000015658	srpra	100	85.145	Poecilia_mexicana
ENSHCOG00000010749	srpra	100	85.911	ENSPREG00000004937	srpra	100	85.605	Poecilia_reticulata
ENSHCOG00000010749	srpra	89	86.842	ENSPPYG00000004045	SRPRA	100	86.842	Pongo_abelii
ENSHCOG00000010749	srpra	61	90.698	ENSPCAG00000003801	-	63	90.698	Procavia_capensis
ENSHCOG00000010749	srpra	100	68.533	ENSPCOG00000025726	SRPRA	100	68.127	Propithecus_coquereli
ENSHCOG00000010749	srpra	100	68.693	ENSPVAG00000000993	SRPRA	100	67.018	Pteropus_vampyrus
ENSHCOG00000010749	srpra	100	84.227	ENSPNYG00000012371	srpra	100	83.920	Pundamilia_nyererei
ENSHCOG00000010749	srpra	100	77.557	ENSPNAG00000013476	srpra	100	77.863	Pygocentrus_nattereri
ENSHCOG00000010749	srpra	100	68.030	ENSRNOG00000010543	Srpra	100	67.121	Rattus_norvegicus
ENSHCOG00000010749	srpra	100	69.499	ENSRBIG00000008702	SRPRA	100	68.437	Rhinopithecus_bieti
ENSHCOG00000010749	srpra	100	68.892	ENSRROG00000029494	SRPRA	100	68.485	Rhinopithecus_roxellana
ENSHCOG00000010749	srpra	56	43.314	YDR292C	-	52	43.161	Saccharomyces_cerevisiae
ENSHCOG00000010749	srpra	100	68.381	ENSSBOG00000035892	SRPRA	100	67.976	Saimiri_boliviensis_boliviensis
ENSHCOG00000010749	srpra	94	67.742	ENSSHAG00000009168	SRPRA	100	66.774	Sarcophilus_harrisii
ENSHCOG00000010749	srpra	100	77.888	ENSSFOG00015008837	srpra	100	78.053	Scleropages_formosus
ENSHCOG00000010749	srpra	100	81.683	ENSSMAG00000002783	srpra	100	81.683	Scophthalmus_maximus
ENSHCOG00000010749	srpra	100	85.142	ENSSDUG00000013920	srpra	100	85.142	Seriola_dumerili
ENSHCOG00000010749	srpra	100	84.557	ENSSLDG00000008601	srpra	93	84.251	Seriola_lalandi_dorsalis
ENSHCOG00000010749	srpra	82	82.927	ENSSARG00000012434	SRPRA	86	82.927	Sorex_araneus
ENSHCOG00000010749	srpra	100	66.617	ENSSPUG00000018221	SRPRA	100	67.884	Sphenodon_punctatus
ENSHCOG00000010749	srpra	99	89.503	ENSSPAG00000005103	srpra	100	87.023	Stegastes_partitus
ENSHCOG00000010749	srpra	100	68.541	ENSSSCG00000015227	SRPRA	100	68.134	Sus_scrofa
ENSHCOG00000010749	srpra	94	66.559	ENSTGUG00000000815	SRPRA	100	67.044	Taeniopygia_guttata
ENSHCOG00000010749	srpra	100	82.975	ENSTRUG00000006856	srpra	100	82.669	Takifugu_rubripes
ENSHCOG00000010749	srpra	100	78.012	ENSTNIG00000010316	srpra	100	78.012	Tetraodon_nigroviridis
ENSHCOG00000010749	srpra	100	69.044	ENSTTRG00000001558	SRPRA	100	67.982	Tursiops_truncatus
ENSHCOG00000010749	srpra	100	68.731	ENSUAMG00000005510	SRPRA	100	66.916	Ursus_americanus
ENSHCOG00000010749	srpra	96	62.539	ENSUMAG00000002269	SRPRA	100	61.815	Ursus_maritimus
ENSHCOG00000010749	srpra	69	90.698	ENSVPAG00000001077	SRPRA	75	90.698	Vicugna_pacos
ENSHCOG00000010749	srpra	100	68.997	ENSVVUG00000020094	SRPRA	100	68.741	Vulpes_vulpes
ENSHCOG00000010749	srpra	100	63.595	ENSXETG00000003920	srpra	100	62.991	Xenopus_tropicalis
ENSHCOG00000010749	srpra	87	94.895	ENSXCOG00000001286	srpra	100	94.895	Xiphophorus_couchianus
ENSHCOG00000010749	srpra	100	85.145	ENSXMAG00000028401	srpra	100	84.992	Xiphophorus_maculatus