EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000010786 (Gene tree)
Gene ID: -
Gene Symbol: larp1
Alias: wu:fb92d03|wu:fd15e07
Full Name: La ribonucleoprotein domain family member 1
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 25383 bases
Position: chrKV879709.1:675276-700658
Accession: 109517830
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000008508	La	PF05383.17	1.5e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000000196	-	2862	XM_019873224	ENSHCOP00000008508	953 (aa)	XP_019728783	-

Gene Model

Click here to download ENSHCOG00000010786's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000010786's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000010786	larp1	62	65.842	ENSHCOG00000000918	larp1b	83	67.079

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000010786	larp1	85	78.998	ENSG00000155506	LARP1	90	80.606	Homo_sapiens
ENSHCOG00000010786	larp1	87	95.434	ENSAPOG00000020685	larp1	99	95.434	Acanthochromis_polyacanthus
ENSHCOG00000010786	larp1	86	79.108	ENSAMEG00000016673	LARP1	91	79.343	Ailuropoda_melanoleuca
ENSHCOG00000010786	larp1	99	91.932	ENSACIG00000012994	larp1	91	91.687	Amphilophus_citrinellus
ENSHCOG00000010786	larp1	73	92.162	ENSAOCG00000007792	larp1	84	92.162	Amphiprion_ocellaris
ENSHCOG00000010786	larp1	99	92.162	ENSAPEG00000022246	larp1	92	91.211	Amphiprion_percula
ENSHCOG00000010786	larp1	98	95.178	ENSATEG00000013523	larp1	91	93.012	Anabas_testudineus
ENSHCOG00000010786	larp1	78	86.464	ENSAPLG00000007559	LARP1	89	86.464	Anas_platyrhynchos
ENSHCOG00000010786	larp1	83	80.000	ENSACAG00000004071	LARP1	88	78.322	Anolis_carolinensis
ENSHCOG00000010786	larp1	85	78.998	ENSANAG00000029949	LARP1	91	77.358	Aotus_nancymaae
ENSHCOG00000010786	larp1	99	92.718	ENSACLG00000015256	larp1	90	92.718	Astatotilapia_calliptera
ENSHCOG00000010786	larp1	99	86.165	ENSAMXG00000000859	larp1	90	89.086	Astyanax_mexicanus
ENSHCOG00000010786	larp1	97	83.969	ENSBTAG00000008443	LARP1	90	84.010	Bos_taurus
ENSHCOG00000010786	larp1	99	78.998	ENSCJAG00000004454	LARP1	92	79.236	Callithrix_jacchus
ENSHCOG00000010786	larp1	85	78.873	ENSCAFG00000017639	LARP1	89	79.108	Canis_familiaris
ENSHCOG00000010786	larp1	80	78.873	ENSCAFG00020023860	LARP1	90	79.108	Canis_lupus_dingo
ENSHCOG00000010786	larp1	97	83.969	ENSCHIG00000014414	LARP1	90	83.879	Capra_hircus
ENSHCOG00000010786	larp1	84	79.481	ENSTSYG00000013732	LARP1	87	79.481	Carlito_syrichta
ENSHCOG00000010786	larp1	76	86.630	ENSCAPG00000013865	LARP1	77	86.630	Cavia_aperea
ENSHCOG00000010786	larp1	85	79.108	ENSCPOG00000003377	LARP1	89	79.108	Cavia_porcellus
ENSHCOG00000010786	larp1	99	78.998	ENSCCAG00000025201	LARP1	92	79.236	Cebus_capucinus
ENSHCOG00000010786	larp1	99	78.759	ENSCATG00000030675	LARP1	92	78.998	Cercocebus_atys
ENSHCOG00000010786	larp1	85	79.108	ENSCLAG00000012755	LARP1	89	79.108	Chinchilla_lanigera
ENSHCOG00000010786	larp1	80	78.998	ENSCSAG00000010800	LARP1	88	79.236	Chlorocebus_sabaeus
ENSHCOG00000010786	larp1	83	67.780	ENSCHOG00000012716	LARP1	83	67.780	Choloepus_hoffmanni
ENSHCOG00000010786	larp1	88	84.772	ENSCPBG00000002173	LARP1	85	83.750	Chrysemys_picta_bellii
ENSHCOG00000010786	larp1	85	79.236	ENSCANG00000037418	LARP1	82	79.236	Colobus_angolensis_palliatus
ENSHCOG00000010786	larp1	99	79.529	ENSCGRG00001016913	Larp1	89	83.797	Cricetulus_griseus_chok1gshd
ENSHCOG00000010786	larp1	83	81.170	ENSCGRG00000009916	Larp1	91	81.170	Cricetulus_griseus_crigri
ENSHCOG00000010786	larp1	99	92.910	ENSCSEG00000016431	larp1	90	92.927	Cynoglossus_semilaevis
ENSHCOG00000010786	larp1	99	91.019	ENSCVAG00000022687	larp1	87	93.484	Cyprinodon_variegatus
ENSHCOG00000010786	larp1	90	84.375	ENSDARG00000101722	larp1	87	84.375	Danio_rerio
ENSHCOG00000010786	larp1	99	78.638	ENSDNOG00000012073	LARP1	92	78.638	Dasypus_novemcinctus
ENSHCOG00000010786	larp1	83	78.873	ENSDORG00000002897	Larp1	87	78.873	Dipodomys_ordii
ENSHCOG00000010786	larp1	79	86.351	ENSETEG00000020251	LARP1	89	86.351	Echinops_telfairi
ENSHCOG00000010786	larp1	99	79.108	ENSEASG00005001070	LARP1	92	79.108	Equus_asinus_asinus
ENSHCOG00000010786	larp1	94	86.351	ENSECAG00000017002	LARP1	72	86.351	Equus_caballus
ENSHCOG00000010786	larp1	84	79.343	ENSEEUG00000001065	LARP1	91	79.343	Erinaceus_europaeus
ENSHCOG00000010786	larp1	97	90.291	ENSELUG00000019403	larp1	90	90.291	Esox_lucius
ENSHCOG00000010786	larp1	99	78.873	ENSFCAG00000000592	LARP1	92	79.108	Felis_catus
ENSHCOG00000010786	larp1	71	82.082	ENSFALG00000008335	LARP1	83	83.500	Ficedula_albicollis
ENSHCOG00000010786	larp1	86	78.873	ENSFDAG00000021125	LARP1	90	78.873	Fukomys_damarensis
ENSHCOG00000010786	larp1	59	75.758	ENSFHEG00000020307	larp1	81	67.314	Fundulus_heteroclitus
ENSHCOG00000010786	larp1	97	84.518	ENSGALG00000040109	LARP1	90	84.518	Gallus_gallus
ENSHCOG00000010786	larp1	97	84.518	ENSGAGG00000025113	LARP1	92	83.500	Gopherus_agassizii
ENSHCOG00000010786	larp1	85	78.998	ENSGGOG00000006048	LARP1	82	79.236	Gorilla_gorilla
ENSHCOG00000010786	larp1	99	92.961	ENSHBUG00000020762	larp1	89	92.961	Haplochromis_burtoni
ENSHCOG00000010786	larp1	99	78.873	ENSHGLG00000006267	LARP1	92	78.873	Heterocephalus_glaber_female
ENSHCOG00000010786	larp1	85	78.873	ENSHGLG00100014230	-	89	78.873	Heterocephalus_glaber_male
ENSHCOG00000010786	larp1	87	72.335	ENSHGLG00100003395	-	83	69.565	Heterocephalus_glaber_male
ENSHCOG00000010786	larp1	90	83.005	ENSIPUG00000019105	Larp1	88	83.582	Ictalurus_punctatus
ENSHCOG00000010786	larp1	85	79.108	ENSSTOG00000005678	LARP1	88	79.108	Ictidomys_tridecemlineatus
ENSHCOG00000010786	larp1	92	77.412	ENSJJAG00000016950	Larp1	85	77.412	Jaculus_jaculus
ENSHCOG00000010786	larp1	96	95.141	ENSKMAG00000018468	larp1	88	93.985	Kryptolebias_marmoratus
ENSHCOG00000010786	larp1	99	93.689	ENSLBEG00000027172	larp1	92	91.148	Labrus_bergylta
ENSHCOG00000010786	larp1	94	90.909	ENSLOCG00000012457	larp1	91	90.909	Lepisosteus_oculatus
ENSHCOG00000010786	larp1	99	78.404	ENSLAFG00000008991	LARP1	92	78.404	Loxodonta_africana
ENSHCOG00000010786	larp1	85	78.998	ENSMFAG00000031651	LARP1	82	79.236	Macaca_fascicularis
ENSHCOG00000010786	larp1	85	78.998	ENSMMUG00000009411	LARP1	88	79.236	Macaca_mulatta
ENSHCOG00000010786	larp1	82	78.998	ENSMNEG00000039294	LARP1	89	79.236	Macaca_nemestrina
ENSHCOG00000010786	larp1	85	78.759	ENSMLEG00000035142	LARP1	82	78.998	Mandrillus_leucophaeus
ENSHCOG00000010786	larp1	99	91.687	ENSMAMG00000021788	larp1	88	94.629	Mastacembelus_armatus
ENSHCOG00000010786	larp1	99	92.718	ENSMZEG00005009345	larp1	90	92.718	Maylandia_zebra
ENSHCOG00000010786	larp1	82	82.750	ENSMGAG00000005696	LARP1	86	82.750	Meleagris_gallopavo
ENSHCOG00000010786	larp1	99	79.294	ENSMAUG00000001385	Larp1	89	83.544	Mesocricetus_auratus
ENSHCOG00000010786	larp1	85	79.294	ENSMICG00000000837	LARP1	90	79.294	Microcebus_murinus
ENSHCOG00000010786	larp1	99	79.529	ENSMOCG00000008920	Larp1	92	79.529	Microtus_ochrogaster
ENSHCOG00000010786	larp1	95	66.004	ENSMMOG00000013364	larp1	90	66.667	Mola_mola
ENSHCOG00000010786	larp1	86	78.282	ENSMODG00000008663	LARP1	90	78.282	Monodelphis_domestica
ENSHCOG00000010786	larp1	98	92.718	ENSMALG00000017180	larp1	87	93.985	Monopterus_albus
ENSHCOG00000010786	larp1	99	79.765	MGP_CAROLIEiJ_G0016383	Larp1	92	79.765	Mus_caroli
ENSHCOG00000010786	larp1	100	79.577	ENSMUSG00000037331	Larp1	92	79.577	Mus_musculus
ENSHCOG00000010786	larp1	99	79.765	MGP_PahariEiJ_G0017518	Larp1	92	79.765	Mus_pahari
ENSHCOG00000010786	larp1	100	79.577	MGP_SPRETEiJ_G0017225	Larp1	92	79.577	Mus_spretus
ENSHCOG00000010786	larp1	81	83.550	ENSMPUG00000013564	LARP1	91	83.550	Mustela_putorius_furo
ENSHCOG00000010786	larp1	86	72.104	ENSMLUG00000002608	LARP1	91	72.813	Myotis_lucifugus
ENSHCOG00000010786	larp1	84	80.144	ENSNGAG00000001098	Larp1	87	80.144	Nannospalax_galili
ENSHCOG00000010786	larp1	92	89.320	ENSNBRG00000008963	larp1	90	92.366	Neolamprologus_brichardi
ENSHCOG00000010786	larp1	86	79.759	ENSNLEG00000016588	LARP1	89	79.236	Nomascus_leucogenys
ENSHCOG00000010786	larp1	81	77.053	ENSMEUG00000002957	LARP1	84	77.053	Notamacropus_eugenii
ENSHCOG00000010786	larp1	86	78.873	ENSOPRG00000013014	LARP1	90	78.873	Ochotona_princeps
ENSHCOG00000010786	larp1	86	79.108	ENSODEG00000010824	LARP1	88	79.108	Octodon_degus
ENSHCOG00000010786	larp1	99	92.961	ENSONIG00000017308	larp1	90	92.961	Oreochromis_niloticus
ENSHCOG00000010786	larp1	86	80.144	ENSOANG00000005096	LARP1	85	83.887	Ornithorhynchus_anatinus
ENSHCOG00000010786	larp1	99	78.873	ENSOCUG00000013066	LARP1	92	79.108	Oryctolagus_cuniculus
ENSHCOG00000010786	larp1	98	88.998	ENSORLG00000000824	larp1	87	91.816	Oryzias_latipes
ENSHCOG00000010786	larp1	98	88.998	ENSORLG00020022241	larp1	87	91.816	Oryzias_latipes_hni
ENSHCOG00000010786	larp1	98	88.753	ENSORLG00015007538	larp1	87	91.560	Oryzias_latipes_hsok
ENSHCOG00000010786	larp1	99	89.242	ENSOMEG00000003134	larp1	88	91.162	Oryzias_melastigma
ENSHCOG00000010786	larp1	86	79.343	ENSOGAG00000016750	LARP1	90	79.343	Otolemur_garnettii
ENSHCOG00000010786	larp1	82	83.969	ENSOARG00000009893	LARP1	86	83.879	Ovis_aries
ENSHCOG00000010786	larp1	85	78.998	ENSPPAG00000042993	LARP1	82	79.236	Pan_paniscus
ENSHCOG00000010786	larp1	87	78.638	ENSPPRG00000009780	LARP1	87	78.873	Panthera_pardus
ENSHCOG00000010786	larp1	87	78.873	ENSPTIG00000007013	LARP1	86	79.108	Panthera_tigris_altaica
ENSHCOG00000010786	larp1	99	78.998	ENSPTRG00000017447	LARP1	92	79.236	Pan_troglodytes
ENSHCOG00000010786	larp1	99	78.759	ENSPANG00000008080	LARP1	92	78.998	Papio_anubis
ENSHCOG00000010786	larp1	95	90.649	ENSPKIG00000010096	larp1	88	90.206	Paramormyrops_kingsleyae
ENSHCOG00000010786	larp1	98	83.333	ENSPKIG00000017153	-	93	85.912	Paramormyrops_kingsleyae
ENSHCOG00000010786	larp1	94	90.933	ENSPMGG00000011599	larp1	90	90.933	Periophthalmus_magnuspinnatus
ENSHCOG00000010786	larp1	85	79.294	ENSPEMG00000022523	Larp1	85	83.969	Peromyscus_maniculatus_bairdii
ENSHCOG00000010786	larp1	97	83.590	ENSPCIG00000019242	LARP1	83	83.590	Phascolarctos_cinereus
ENSHCOG00000010786	larp1	96	94.373	ENSPFOG00000005836	larp1	87	92.982	Poecilia_formosa
ENSHCOG00000010786	larp1	96	94.373	ENSPLAG00000008936	larp1	87	92.982	Poecilia_latipinna
ENSHCOG00000010786	larp1	97	94.118	ENSPMEG00000013656	larp1	89	92.732	Poecilia_mexicana
ENSHCOG00000010786	larp1	81	94.373	ENSPREG00000005726	larp1	83	92.732	Poecilia_reticulata
ENSHCOG00000010786	larp1	85	79.245	ENSPCAG00000006407	LARP1	87	82.707	Procavia_capensis
ENSHCOG00000010786	larp1	85	62.207	ENSPCOG00000016949	LARP1	89	68.779	Propithecus_coquereli
ENSHCOG00000010786	larp1	99	78.873	ENSPVAG00000002262	LARP1	92	78.873	Pteropus_vampyrus
ENSHCOG00000010786	larp1	99	92.961	ENSPNYG00000007938	larp1	90	92.961	Pundamilia_nyererei
ENSHCOG00000010786	larp1	99	85.851	ENSPNAG00000021427	larp1	92	85.851	Pygocentrus_nattereri
ENSHCOG00000010786	larp1	85	79.529	ENSRNOG00000031544	Larp1	88	79.529	Rattus_norvegicus
ENSHCOG00000010786	larp1	85	78.759	ENSRBIG00000038005	LARP1	82	78.998	Rhinopithecus_bieti
ENSHCOG00000010786	larp1	85	78.759	ENSRROG00000034073	LARP1	89	78.998	Rhinopithecus_roxellana
ENSHCOG00000010786	larp1	86	78.998	ENSSBOG00000019816	LARP1	90	79.236	Saimiri_boliviensis_boliviensis
ENSHCOG00000010786	larp1	86	80.048	ENSSHAG00000011115	LARP1	89	80.048	Sarcophilus_harrisii
ENSHCOG00000010786	larp1	84	80.778	ENSSFOG00015020304	larp1	82	84.223	Scleropages_formosus
ENSHCOG00000010786	larp1	99	86.308	ENSSFOG00015018058	-	90	87.970	Scleropages_formosus
ENSHCOG00000010786	larp1	93	95.304	ENSSMAG00000007468	larp1	91	95.304	Scophthalmus_maximus
ENSHCOG00000010786	larp1	99	94.660	ENSSDUG00000000268	larp1	88	94.660	Seriola_dumerili
ENSHCOG00000010786	larp1	80	93.447	ENSSLDG00000016505	larp1	87	93.447	Seriola_lalandi_dorsalis
ENSHCOG00000010786	larp1	51	79.273	ENSSARG00000013907	-	73	79.273	Sorex_araneus
ENSHCOG00000010786	larp1	99	81.579	ENSSPUG00000012179	-	91	82.353	Sphenodon_punctatus
ENSHCOG00000010786	larp1	99	91.509	ENSSPAG00000003910	larp1	88	93.888	Stegastes_partitus
ENSHCOG00000010786	larp1	99	79.108	ENSSSCG00000017069	LARP1	92	79.108	Sus_scrofa
ENSHCOG00000010786	larp1	81	83.333	ENSTGUG00000000704	LARP1	87	83.333	Taeniopygia_guttata
ENSHCOG00000010786	larp1	99	92.961	ENSTRUG00000009470	larp1	91	92.718	Takifugu_rubripes
ENSHCOG00000010786	larp1	79	86.908	ENSTBEG00000003381	LARP1	89	86.908	Tupaia_belangeri
ENSHCOG00000010786	larp1	85	78.282	ENSTTRG00000015934	LARP1	88	79.475	Tursiops_truncatus
ENSHCOG00000010786	larp1	99	78.873	ENSUAMG00000019334	LARP1	92	78.873	Ursus_americanus
ENSHCOG00000010786	larp1	81	86.630	ENSUMAG00000002934	LARP1	85	86.630	Ursus_maritimus
ENSHCOG00000010786	larp1	80	78.873	ENSVVUG00000004644	LARP1	90	79.108	Vulpes_vulpes
ENSHCOG00000010786	larp1	90	83.375	ENSXETG00000008413	larp1	89	83.375	Xenopus_tropicalis
ENSHCOG00000010786	larp1	83	89.078	ENSXCOG00000004022	larp1	86	91.228	Xiphophorus_couchianus
ENSHCOG00000010786	larp1	96	94.118	ENSXMAG00000018780	larp1	87	92.481	Xiphophorus_maculatus