EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000010799 (Gene tree)
Gene ID: 109521548
Gene Symbol: shq1
Alias: zgc:158255
Full Name: protein SHQ1 homolog
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 15228 bases
Position: chrKV880111.1:1988445-2003672
Accession: 109521548
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000008525	SHQ1	PF04925.15	1.3e-63	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000000153	-	1734	XM_019879437	ENSHCOP00000008525	577 (aa)	XP_019734996	-

Gene Model

Click here to download ENSHCOG00000010799's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000010799's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000010799	shq1	90	52.747	ENSG00000144736	SHQ1	100	68.000	Homo_sapiens
ENSHCOG00000010799	shq1	99	65.340	ENSAPOG00000000397	shq1	99	67.662	Acanthochromis_polyacanthus
ENSHCOG00000010799	shq1	90	54.044	ENSAMEG00000015140	SHQ1	94	53.125	Ailuropoda_melanoleuca
ENSHCOG00000010799	shq1	99	64.657	ENSACIG00000021249	shq1	99	64.824	Amphilophus_citrinellus
ENSHCOG00000010799	shq1	99	67.987	ENSAOCG00000023311	shq1	98	67.822	Amphiprion_ocellaris
ENSHCOG00000010799	shq1	99	68.220	ENSAPEG00000021686	shq1	98	67.993	Amphiprion_percula
ENSHCOG00000010799	shq1	99	66.891	ENSATEG00000008475	shq1	98	67.227	Anabas_testudineus
ENSHCOG00000010799	shq1	74	57.848	ENSAPLG00000013926	SHQ1	87	57.175	Anas_platyrhynchos
ENSHCOG00000010799	shq1	72	59.207	ENSACAG00000014809	SHQ1	90	46.787	Anolis_carolinensis
ENSHCOG00000010799	shq1	89	39.429	ENSANAG00000030500	-	95	38.491	Aotus_nancymaae
ENSHCOG00000010799	shq1	90	53.114	ENSANAG00000029241	SHQ1	94	52.381	Aotus_nancymaae
ENSHCOG00000010799	shq1	99	63.149	ENSACLG00000023077	shq1	99	60.703	Astatotilapia_calliptera
ENSHCOG00000010799	shq1	72	62.736	ENSAMXG00000043822	shq1	75	62.704	Astyanax_mexicanus
ENSHCOG00000010799	shq1	90	53.102	ENSBTAG00000005436	SHQ1	94	52.737	Bos_taurus
ENSHCOG00000010799	shq1	72	31.034	WBGene00021655	Y48A5A.1	97	31.075	Caenorhabditis_elegans
ENSHCOG00000010799	shq1	74	58.108	ENSCJAG00000015131	SHQ1	94	51.277	Callithrix_jacchus
ENSHCOG00000010799	shq1	90	52.941	ENSCAFG00000006434	SHQ1	94	52.022	Canis_familiaris
ENSHCOG00000010799	shq1	90	53.125	ENSCAFG00020016743	SHQ1	94	52.206	Canis_lupus_dingo
ENSHCOG00000010799	shq1	90	53.102	ENSCHIG00000012271	SHQ1	86	52.555	Capra_hircus
ENSHCOG00000010799	shq1	74	56.236	ENSTSYG00000014439	SHQ1	94	48.614	Carlito_syrichta
ENSHCOG00000010799	shq1	81	48.837	ENSCAPG00000009343	SHQ1	89	59.091	Cavia_aperea
ENSHCOG00000010799	shq1	90	50.452	ENSCPOG00000011443	SHQ1	95	50.633	Cavia_porcellus
ENSHCOG00000010799	shq1	74	51.802	ENSCCAG00000027080	SHQ1	94	45.772	Cebus_capucinus
ENSHCOG00000010799	shq1	81	43.215	ENSCCAG00000036087	-	83	42.947	Cebus_capucinus
ENSHCOG00000010799	shq1	69	60.628	ENSCATG00000041238	SHQ1	94	52.381	Cercocebus_atys
ENSHCOG00000010799	shq1	74	58.333	ENSCLAG00000004206	SHQ1	94	50.916	Chinchilla_lanigera
ENSHCOG00000010799	shq1	54	58.769	ENSCSAG00000011514	SHQ1	93	49.015	Chlorocebus_sabaeus
ENSHCOG00000010799	shq1	57	50.000	ENSCHOG00000003273	-	84	68.333	Choloepus_hoffmanni
ENSHCOG00000010799	shq1	74	59.101	ENSCPBG00000006441	SHQ1	99	49.013	Chrysemys_picta_bellii
ENSHCOG00000010799	shq1	74	40.136	ENSCING00000008013	-	96	41.667	Ciona_intestinalis
ENSHCOG00000010799	shq1	69	38.462	ENSCSAVG00000002332	-	98	38.679	Ciona_savignyi
ENSHCOG00000010799	shq1	90	53.114	ENSCANG00000039295	SHQ1	95	51.648	Colobus_angolensis_palliatus
ENSHCOG00000010799	shq1	95	49.648	ENSCGRG00001012583	Shq1	93	56.757	Cricetulus_griseus_chok1gshd
ENSHCOG00000010799	shq1	95	49.648	ENSCGRG00000009849	Shq1	93	56.757	Cricetulus_griseus_crigri
ENSHCOG00000010799	shq1	70	73.839	ENSCSEG00000007829	shq1	99	61.874	Cynoglossus_semilaevis
ENSHCOG00000010799	shq1	99	62.671	ENSCVAG00000020049	shq1	99	62.823	Cyprinodon_variegatus
ENSHCOG00000010799	shq1	73	64.336	ENSDARG00000058522	shq1	96	52.129	Danio_rerio
ENSHCOG00000010799	shq1	90	52.670	ENSDNOG00000033937	SHQ1	94	52.118	Dasypus_novemcinctus
ENSHCOG00000010799	shq1	69	52.657	ENSETEG00000005766	SHQ1	85	60.396	Echinops_telfairi
ENSHCOG00000010799	shq1	63	46.702	ENSEBUG00000005445	shq1	90	45.209	Eptatretus_burgeri
ENSHCOG00000010799	shq1	90	54.044	ENSEASG00005002237	SHQ1	94	53.125	Equus_asinus_asinus
ENSHCOG00000010799	shq1	90	54.412	ENSECAG00000015673	SHQ1	92	53.493	Equus_caballus
ENSHCOG00000010799	shq1	74	58.108	ENSEEUG00000010568	SHQ1	94	50.640	Erinaceus_europaeus
ENSHCOG00000010799	shq1	69	70.690	ENSELUG00000003476	shq1	97	59.391	Esox_lucius
ENSHCOG00000010799	shq1	92	52.717	ENSFCAG00000012781	SHQ1	96	51.993	Felis_catus
ENSHCOG00000010799	shq1	98	49.429	ENSFALG00000013428	SHQ1	99	50.413	Ficedula_albicollis
ENSHCOG00000010799	shq1	98	60.684	ENSFHEG00000017552	shq1	99	61.565	Fundulus_heteroclitus
ENSHCOG00000010799	shq1	66	70.619	ENSGMOG00000007350	shq1	100	70.361	Gadus_morhua
ENSHCOG00000010799	shq1	74	59.594	ENSGALG00000007798	SHQ1	99	49.753	Gallus_gallus
ENSHCOG00000010799	shq1	67	71.392	ENSGACG00000011797	shq1	100	72.351	Gasterosteus_aculeatus
ENSHCOG00000010799	shq1	90	52.364	ENSGGOG00000034818	SHQ1	94	51.636	Gorilla_gorilla
ENSHCOG00000010799	shq1	99	63.591	ENSHBUG00000010857	shq1	99	63.987	Haplochromis_burtoni
ENSHCOG00000010799	shq1	90	49.372	ENSHGLG00000003637	SHQ1	86	49.910	Heterocephalus_glaber_female
ENSHCOG00000010799	shq1	90	49.550	ENSHGLG00100011957	SHQ1	86	50.090	Heterocephalus_glaber_male
ENSHCOG00000010799	shq1	95	54.480	ENSIPUG00000001247	shq1	92	55.197	Ictalurus_punctatus
ENSHCOG00000010799	shq1	90	52.336	ENSSTOG00000010043	SHQ1	96	51.963	Ictidomys_tridecemlineatus
ENSHCOG00000010799	shq1	90	51.024	ENSJJAG00000017611	Shq1	88	58.371	Jaculus_jaculus
ENSHCOG00000010799	shq1	100	65.541	ENSKMAG00000004457	shq1	100	65.313	Kryptolebias_marmoratus
ENSHCOG00000010799	shq1	73	62.500	ENSLACG00000014243	SHQ1	85	52.797	Latimeria_chalumnae
ENSHCOG00000010799	shq1	75	64.444	ENSLOCG00000009970	shq1	96	55.872	Lepisosteus_oculatus
ENSHCOG00000010799	shq1	90	38.185	ENSMFAG00000037396	-	93	38.050	Macaca_fascicularis
ENSHCOG00000010799	shq1	90	53.114	ENSMFAG00000039148	SHQ1	94	52.564	Macaca_fascicularis
ENSHCOG00000010799	shq1	81	51.406	ENSMMUG00000009571	SHQ1	90	50.803	Macaca_mulatta
ENSHCOG00000010799	shq1	90	38.185	ENSMMUG00000021761	-	93	38.050	Macaca_mulatta
ENSHCOG00000010799	shq1	90	53.114	ENSMNEG00000032667	SHQ1	94	52.564	Macaca_nemestrina
ENSHCOG00000010799	shq1	69	60.145	ENSMLEG00000038493	SHQ1	77	58.333	Mandrillus_leucophaeus
ENSHCOG00000010799	shq1	99	64.239	ENSMAMG00000023432	shq1	96	64.297	Mastacembelus_armatus
ENSHCOG00000010799	shq1	99	63.591	ENSMZEG00005008649	shq1	99	63.987	Maylandia_zebra
ENSHCOG00000010799	shq1	98	49.832	ENSMGAG00000009640	SHQ1	99	49.329	Meleagris_gallopavo
ENSHCOG00000010799	shq1	73	59.361	ENSMAUG00000022030	Shq1	77	57.931	Mesocricetus_auratus
ENSHCOG00000010799	shq1	90	51.087	ENSMICG00000009224	SHQ1	94	49.407	Microcebus_murinus
ENSHCOG00000010799	shq1	73	59.268	ENSMOCG00000017836	Shq1	77	57.931	Microtus_ochrogaster
ENSHCOG00000010799	shq1	99	62.267	ENSMMOG00000010569	shq1	99	61.993	Mola_mola
ENSHCOG00000010799	shq1	90	52.015	ENSMODG00000003926	SHQ1	78	57.437	Monodelphis_domestica
ENSHCOG00000010799	shq1	99	68.475	ENSMALG00000008870	shq1	98	68.136	Monopterus_albus
ENSHCOG00000010799	shq1	90	50.933	MGP_CAROLIEiJ_G0028689	Shq1	89	57.207	Mus_caroli
ENSHCOG00000010799	shq1	90	52.142	ENSMUSG00000035378	Shq1	89	57.207	Mus_musculus
ENSHCOG00000010799	shq1	90	52.045	MGP_PahariEiJ_G0022440	Shq1	95	51.673	Mus_pahari
ENSHCOG00000010799	shq1	90	52.941	MGP_SPRETEiJ_G0029717	Shq1	94	51.583	Mus_spretus
ENSHCOG00000010799	shq1	90	54.596	ENSMPUG00000017006	SHQ1	93	53.676	Mustela_putorius_furo
ENSHCOG00000010799	shq1	82	50.201	ENSMLUG00000013539	SHQ1	94	50.201	Myotis_lucifugus
ENSHCOG00000010799	shq1	79	49.573	ENSNGAG00000023317	Shq1	76	53.095	Nannospalax_galili
ENSHCOG00000010799	shq1	83	60.158	ENSNBRG00000024004	shq1	98	60.630	Neolamprologus_brichardi
ENSHCOG00000010799	shq1	90	52.747	ENSNLEG00000002731	SHQ1	94	52.015	Nomascus_leucogenys
ENSHCOG00000010799	shq1	71	53.704	ENSMEUG00000009350	-	54	53.704	Notamacropus_eugenii
ENSHCOG00000010799	shq1	73	59.217	ENSODEG00000009192	SHQ1	90	57.143	Octodon_degus
ENSHCOG00000010799	shq1	99	63.652	ENSONIG00000020264	shq1	99	64.154	Oreochromis_niloticus
ENSHCOG00000010799	shq1	90	52.717	ENSOCUG00000016695	SHQ1	98	50.426	Oryctolagus_cuniculus
ENSHCOG00000010799	shq1	95	64.695	ENSORLG00000023538	shq1	95	65.054	Oryzias_latipes
ENSHCOG00000010799	shq1	95	64.758	ENSORLG00020003697	shq1	97	63.556	Oryzias_latipes_hni
ENSHCOG00000010799	shq1	95	64.337	ENSORLG00015021040	shq1	95	64.337	Oryzias_latipes_hsok
ENSHCOG00000010799	shq1	95	64.235	ENSOMEG00000001225	shq1	97	64.413	Oryzias_melastigma
ENSHCOG00000010799	shq1	90	51.444	ENSOGAG00000003898	SHQ1	78	56.600	Otolemur_garnettii
ENSHCOG00000010799	shq1	90	52.080	ENSOARG00000009547	SHQ1	94	51.718	Ovis_aries
ENSHCOG00000010799	shq1	90	52.930	ENSPPAG00000027714	SHQ1	94	52.727	Pan_paniscus
ENSHCOG00000010799	shq1	90	39.286	ENSPPAG00000043263	-	93	38.910	Pan_paniscus
ENSHCOG00000010799	shq1	90	52.651	ENSPPRG00000004769	SHQ1	94	51.920	Panthera_pardus
ENSHCOG00000010799	shq1	90	50.185	ENSPTIG00000011478	SHQ1	94	50.000	Panthera_tigris_altaica
ENSHCOG00000010799	shq1	90	39.212	ENSPTRG00000048303	-	93	39.089	Pan_troglodytes
ENSHCOG00000010799	shq1	90	52.930	ENSPTRG00000015106	SHQ1	94	52.747	Pan_troglodytes
ENSHCOG00000010799	shq1	74	59.910	ENSPANG00000002881	SHQ1	94	52.198	Papio_anubis
ENSHCOG00000010799	shq1	99	54.146	ENSPKIG00000021517	shq1	98	54.839	Paramormyrops_kingsleyae
ENSHCOG00000010799	shq1	74	57.399	ENSPSIG00000005536	SHQ1	73	58.166	Pelodiscus_sinensis
ENSHCOG00000010799	shq1	98	59.931	ENSPMGG00000008838	shq1	98	59.516	Periophthalmus_magnuspinnatus
ENSHCOG00000010799	shq1	69	59.375	ENSPEMG00000000251	Shq1	99	49.126	Peromyscus_maniculatus_bairdii
ENSHCOG00000010799	shq1	75	53.659	ENSPMAG00000005372	shq1	100	54.464	Petromyzon_marinus
ENSHCOG00000010799	shq1	91	64.060	ENSPFOG00000003118	shq1	97	64.804	Poecilia_formosa
ENSHCOG00000010799	shq1	76	61.124	ENSPMEG00000011076	shq1	96	62.332	Poecilia_mexicana
ENSHCOG00000010799	shq1	84	60.765	ENSPREG00000000591	shq1	94	61.647	Poecilia_reticulata
ENSHCOG00000010799	shq1	95	50.000	ENSPPYG00000013717	SHQ1	100	50.000	Pongo_abelii
ENSHCOG00000010799	shq1	90	53.125	ENSPCAG00000009035	SHQ1	95	52.285	Procavia_capensis
ENSHCOG00000010799	shq1	74	58.389	ENSPCOG00000008415	SHQ1	94	51.083	Propithecus_coquereli
ENSHCOG00000010799	shq1	90	52.285	ENSPVAG00000017392	SHQ1	94	52.206	Pteropus_vampyrus
ENSHCOG00000010799	shq1	99	63.149	ENSPNYG00000003878	shq1	99	63.987	Pundamilia_nyererei
ENSHCOG00000010799	shq1	72	67.294	ENSPNAG00000026840	shq1	98	54.366	Pygocentrus_nattereri
ENSHCOG00000010799	shq1	73	58.161	ENSRNOG00000005433	Shq1	89	50.652	Rattus_norvegicus
ENSHCOG00000010799	shq1	90	51.386	ENSRBIG00000026280	SHQ1	95	51.504	Rhinopithecus_bieti
ENSHCOG00000010799	shq1	90	53.297	ENSRROG00000034126	SHQ1	95	52.564	Rhinopithecus_roxellana
ENSHCOG00000010799	shq1	74	53.153	ENSSBOG00000021038	SHQ1	94	46.898	Saimiri_boliviensis_boliviensis
ENSHCOG00000010799	shq1	90	50.923	ENSSHAG00000015077	SHQ1	96	50.554	Sarcophilus_harrisii
ENSHCOG00000010799	shq1	99	56.604	ENSSFOG00015016241	shq1	99	57.363	Scleropages_formosus
ENSHCOG00000010799	shq1	100	65.568	ENSSMAG00000016151	shq1	100	66.283	Scophthalmus_maximus
ENSHCOG00000010799	shq1	100	67.264	ENSSDUG00000011986	shq1	100	67.590	Seriola_dumerili
ENSHCOG00000010799	shq1	100	66.667	ENSSLDG00000013908	shq1	100	66.995	Seriola_lalandi_dorsalis
ENSHCOG00000010799	shq1	90	45.149	ENSSARG00000007119	SHQ1	94	45.028	Sorex_araneus
ENSHCOG00000010799	shq1	82	48.155	ENSSPUG00000011526	-	96	47.961	Sphenodon_punctatus
ENSHCOG00000010799	shq1	95	50.940	ENSSSCG00000011518	SHQ1	99	50.777	Sus_scrofa
ENSHCOG00000010799	shq1	69	60.382	ENSTGUG00000009933	SHQ1	83	55.144	Taeniopygia_guttata
ENSHCOG00000010799	shq1	99	60.137	ENSTRUG00000009446	shq1	99	60.549	Takifugu_rubripes
ENSHCOG00000010799	shq1	69	69.100	ENSTNIG00000007354	shq1	97	67.808	Tetraodon_nigroviridis
ENSHCOG00000010799	shq1	52	70.213	ENSTBEG00000011295	SHQ1	55	70.213	Tupaia_belangeri
ENSHCOG00000010799	shq1	90	51.460	ENSTTRG00000005320	SHQ1	99	48.976	Tursiops_truncatus
ENSHCOG00000010799	shq1	90	55.075	ENSUMAG00000024031	SHQ1	94	54.820	Ursus_maritimus
ENSHCOG00000010799	shq1	67	48.694	ENSVPAG00000004880	SHQ1	94	44.841	Vicugna_pacos
ENSHCOG00000010799	shq1	90	52.941	ENSVVUG00000013906	SHQ1	94	52.022	Vulpes_vulpes
ENSHCOG00000010799	shq1	98	46.787	ENSXETG00000032215	shq1	98	46.812	Xenopus_tropicalis