EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000010865 (Gene tree)
Gene ID: 109528859
Gene Symbol: rbm17
Alias: zgc:55840
Full Name: RNA binding motif protein 17
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 5107 bases
Position: chrKV880342.1:130158-135264
Accession: 109528859
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000008588	RRM_1	PF00076.22	5.7e-05	1	1
ENSHCOP00000008588	G-patch	PF01585.23	4e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000000045	-	1932	XM_019891887	ENSHCOP00000008588	416 (aa)	XP_019747446	UPI00094E8ECD

Gene Model

Click here to download ENSHCOG00000010865's gene model file

Pathways

Pathway ID	Pathway Name	Source
hcq03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000010865's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000010865	rbm17	100	77.804	ENSG00000134453	RBM17	99	77.804	Homo_sapiens
ENSHCOG00000010865	rbm17	99	90.602	ENSAPOG00000007101	rbm17	99	90.602	Acanthochromis_polyacanthus
ENSHCOG00000010865	rbm17	100	78.043	ENSAMEG00000002107	RBM17	99	78.043	Ailuropoda_melanoleuca
ENSHCOG00000010865	rbm17	100	85.132	ENSACIG00000006251	rbm17	99	85.132	Amphilophus_citrinellus
ENSHCOG00000010865	rbm17	100	90.408	ENSAOCG00000014892	rbm17	99	90.408	Amphiprion_ocellaris
ENSHCOG00000010865	rbm17	100	90.408	ENSAPEG00000022779	rbm17	99	90.408	Amphiprion_percula
ENSHCOG00000010865	rbm17	100	87.351	ENSATEG00000004406	rbm17	99	87.351	Anabas_testudineus
ENSHCOG00000010865	rbm17	100	77.804	ENSAPLG00000004190	RBM17	99	77.804	Anas_platyrhynchos
ENSHCOG00000010865	rbm17	90	75.130	ENSACAG00000005418	RBM17	99	75.130	Anolis_carolinensis
ENSHCOG00000010865	rbm17	100	78.282	ENSANAG00000030127	RBM17	90	89.286	Aotus_nancymaae
ENSHCOG00000010865	rbm17	100	66.905	ENSANAG00000019330	-	92	84.821	Aotus_nancymaae
ENSHCOG00000010865	rbm17	100	83.894	ENSACLG00000003928	rbm17	99	83.894	Astatotilapia_calliptera
ENSHCOG00000010865	rbm17	100	80.523	ENSAMXG00000005853	rbm17	99	81.235	Astyanax_mexicanus
ENSHCOG00000010865	rbm17	100	77.804	ENSBTAG00000021951	RBM17	99	77.804	Bos_taurus
ENSHCOG00000010865	rbm17	100	77.088	ENSBTAG00000011094	-	99	77.088	Bos_taurus
ENSHCOG00000010865	rbm17	74	33.013	WBGene00010233	F58B3.7	90	30.597	Caenorhabditis_elegans
ENSHCOG00000010865	rbm17	100	78.282	ENSCJAG00000020573	RBM17	99	78.282	Callithrix_jacchus
ENSHCOG00000010865	rbm17	100	78.043	ENSCAFG00000005206	RBM17	99	78.043	Canis_familiaris
ENSHCOG00000010865	rbm17	100	73.141	ENSCAFG00020005420	RBM17	99	75.300	Canis_lupus_dingo
ENSHCOG00000010865	rbm17	100	75.656	ENSCHIG00000019921	-	99	75.656	Capra_hircus
ENSHCOG00000010865	rbm17	100	77.804	ENSCHIG00000023204	-	99	77.804	Capra_hircus
ENSHCOG00000010865	rbm17	100	78.282	ENSTSYG00000001165	RBM17	97	87.826	Carlito_syrichta
ENSHCOG00000010865	rbm17	96	58.561	ENSCAPG00000006275	RBM17	99	64.550	Cavia_aperea
ENSHCOG00000010865	rbm17	100	73.634	ENSCPOG00000005679	RBM17	99	75.414	Cavia_porcellus
ENSHCOG00000010865	rbm17	100	78.282	ENSCCAG00000018655	RBM17	90	89.286	Cebus_capucinus
ENSHCOG00000010865	rbm17	100	77.804	ENSCATG00000041566	RBM17	95	87.288	Cercocebus_atys
ENSHCOG00000010865	rbm17	100	78.043	ENSCLAG00000012195	RBM17	99	78.043	Chinchilla_lanigera
ENSHCOG00000010865	rbm17	100	77.804	ENSCSAG00000013564	RBM17	99	77.804	Chlorocebus_sabaeus
ENSHCOG00000010865	rbm17	93	61.795	ENSCHOG00000005131	RBM17	100	61.795	Choloepus_hoffmanni
ENSHCOG00000010865	rbm17	100	78.520	ENSCPBG00000019836	RBM17	99	78.520	Chrysemys_picta_bellii
ENSHCOG00000010865	rbm17	100	46.572	ENSCSAVG00000008782	-	99	44.762	Ciona_savignyi
ENSHCOG00000010865	rbm17	100	77.566	ENSCANG00000030987	RBM17	95	87.288	Colobus_angolensis_palliatus
ENSHCOG00000010865	rbm17	98	69.212	ENSCANG00000023715	-	99	69.212	Colobus_angolensis_palliatus
ENSHCOG00000010865	rbm17	100	78.282	ENSCGRG00001013842	Rbm17	99	78.282	Cricetulus_griseus_chok1gshd
ENSHCOG00000010865	rbm17	100	62.260	ENSCGRG00001009256	-	99	61.298	Cricetulus_griseus_chok1gshd
ENSHCOG00000010865	rbm17	100	78.282	ENSCGRG00000006907	Rbm17	99	78.282	Cricetulus_griseus_crigri
ENSHCOG00000010865	rbm17	100	85.612	ENSCSEG00000018164	rbm17	99	85.612	Cynoglossus_semilaevis
ENSHCOG00000010865	rbm17	100	82.212	ENSCVAG00000002476	rbm17	99	82.212	Cyprinodon_variegatus
ENSHCOG00000010865	rbm17	100	75.297	ENSDARG00000031346	rbm17	99	78.385	Danio_rerio
ENSHCOG00000010865	rbm17	100	77.804	ENSDNOG00000035920	RBM17	99	77.804	Dasypus_novemcinctus
ENSHCOG00000010865	rbm17	99	37.527	FBgn0086683	Spf45	99	36.739	Drosophila_melanogaster
ENSHCOG00000010865	rbm17	86	77.578	ENSETEG00000006642	RBM17	86	77.578	Echinops_telfairi
ENSHCOG00000010865	rbm17	72	57.202	ENSEBUG00000010253	rbm17	98	57.202	Eptatretus_burgeri
ENSHCOG00000010865	rbm17	93	75.258	ENSEASG00005009236	-	99	75.258	Equus_asinus_asinus
ENSHCOG00000010865	rbm17	100	74.101	ENSEASG00005019205	-	99	76.019	Equus_asinus_asinus
ENSHCOG00000010865	rbm17	100	65.947	ENSECAG00000008939	RBM17	99	66.906	Equus_caballus
ENSHCOG00000010865	rbm17	100	69.212	ENSECAG00000001379	-	99	69.212	Equus_caballus
ENSHCOG00000010865	rbm17	87	61.813	ENSEEUG00000013077	RBM17	100	60.440	Erinaceus_europaeus
ENSHCOG00000010865	rbm17	100	82.436	ENSELUG00000006440	rbm17	99	82.436	Esox_lucius
ENSHCOG00000010865	rbm17	100	78.043	ENSFCAG00000031988	RBM17	99	78.043	Felis_catus
ENSHCOG00000010865	rbm17	100	77.327	ENSFALG00000001790	RBM17	99	77.327	Ficedula_albicollis
ENSHCOG00000010865	rbm17	100	78.043	ENSFDAG00000007470	RBM17	99	78.043	Fukomys_damarensis
ENSHCOG00000010865	rbm17	100	86.874	ENSFHEG00000001266	rbm17	99	85.446	Fundulus_heteroclitus
ENSHCOG00000010865	rbm17	100	81.340	ENSGMOG00000008438	rbm17	100	81.340	Gadus_morhua
ENSHCOG00000010865	rbm17	100	77.804	ENSGALG00000006332	RBM17	99	77.804	Gallus_gallus
ENSHCOG00000010865	rbm17	100	86.779	ENSGAFG00000019879	rbm17	99	86.779	Gambusia_affinis
ENSHCOG00000010865	rbm17	100	87.857	ENSGACG00000019174	rbm17	99	87.857	Gasterosteus_aculeatus
ENSHCOG00000010865	rbm17	100	78.520	ENSGAGG00000019906	RBM17	99	78.520	Gopherus_agassizii
ENSHCOG00000010865	rbm17	100	89.688	ENSHBUG00000016624	rbm17	99	89.688	Haplochromis_burtoni
ENSHCOG00000010865	rbm17	100	78.043	ENSHGLG00000011580	RBM17	99	78.043	Heterocephalus_glaber_female
ENSHCOG00000010865	rbm17	100	78.043	ENSHGLG00100010460	RBM17	99	78.043	Heterocephalus_glaber_male
ENSHCOG00000010865	rbm17	100	64.183	ENSHGLG00100010556	-	99	61.779	Heterocephalus_glaber_male
ENSHCOG00000010865	rbm17	100	75.887	ENSIPUG00000007699	Rbm17	99	82.742	Ictalurus_punctatus
ENSHCOG00000010865	rbm17	100	78.282	ENSSTOG00000013591	RBM17	99	78.282	Ictidomys_tridecemlineatus
ENSHCOG00000010865	rbm17	100	57.619	ENSJJAG00000000993	-	99	56.398	Jaculus_jaculus
ENSHCOG00000010865	rbm17	100	78.282	ENSJJAG00000022886	Rbm17	99	78.282	Jaculus_jaculus
ENSHCOG00000010865	rbm17	100	87.589	ENSKMAG00000021400	rbm17	99	88.305	Kryptolebias_marmoratus
ENSHCOG00000010865	rbm17	100	87.828	ENSLBEG00000000881	rbm17	99	87.828	Labrus_bergylta
ENSHCOG00000010865	rbm17	100	65.258	ENSLACG00000017297	RBM17	99	65.501	Latimeria_chalumnae
ENSHCOG00000010865	rbm17	100	80.714	ENSLOCG00000015659	rbm17	99	80.476	Lepisosteus_oculatus
ENSHCOG00000010865	rbm17	100	78.282	ENSLAFG00000011629	RBM17	99	78.282	Loxodonta_africana
ENSHCOG00000010865	rbm17	100	77.804	ENSMFAG00000035521	RBM17	95	87.288	Macaca_fascicularis
ENSHCOG00000010865	rbm17	100	77.804	ENSMMUG00000015152	RBM17	95	87.288	Macaca_mulatta
ENSHCOG00000010865	rbm17	100	77.804	ENSMNEG00000017264	RBM17	95	87.288	Macaca_nemestrina
ENSHCOG00000010865	rbm17	100	77.804	ENSMLEG00000029340	RBM17	95	87.288	Mandrillus_leucophaeus
ENSHCOG00000010865	rbm17	100	87.351	ENSMAMG00000000387	rbm17	99	87.351	Mastacembelus_armatus
ENSHCOG00000010865	rbm17	100	89.688	ENSMZEG00005015179	rbm17	99	89.688	Maylandia_zebra
ENSHCOG00000010865	rbm17	100	77.435	ENSMGAG00000003981	RBM17	99	77.435	Meleagris_gallopavo
ENSHCOG00000010865	rbm17	100	78.282	ENSMAUG00000019247	Rbm17	99	78.282	Mesocricetus_auratus
ENSHCOG00000010865	rbm17	100	78.095	ENSMICG00000003976	-	99	78.282	Microcebus_murinus
ENSHCOG00000010865	rbm17	100	73.095	ENSMICG00000041489	-	99	72.857	Microcebus_murinus
ENSHCOG00000010865	rbm17	93	62.660	ENSMOCG00000014517	-	99	62.660	Microtus_ochrogaster
ENSHCOG00000010865	rbm17	100	78.282	ENSMOCG00000011847	Rbm17	99	78.282	Microtus_ochrogaster
ENSHCOG00000010865	rbm17	100	78.860	ENSMMOG00000010264	rbm17	99	78.860	Mola_mola
ENSHCOG00000010865	rbm17	100	78.043	ENSMODG00000016648	RBM17	99	78.043	Monodelphis_domestica
ENSHCOG00000010865	rbm17	100	86.667	ENSMALG00000010597	rbm17	99	86.905	Monopterus_albus
ENSHCOG00000010865	rbm17	100	78.520	MGP_CAROLIEiJ_G0023173	Rbm17	99	78.520	Mus_caroli
ENSHCOG00000010865	rbm17	100	78.520	ENSMUSG00000037197	Rbm17	99	78.520	Mus_musculus
ENSHCOG00000010865	rbm17	100	78.520	MGP_PahariEiJ_G0019233	Rbm17	99	78.520	Mus_pahari
ENSHCOG00000010865	rbm17	100	78.520	MGP_SPRETEiJ_G0024091	Rbm17	99	78.520	Mus_spretus
ENSHCOG00000010865	rbm17	87	76.374	ENSMPUG00000016359	RBM17	96	76.374	Mustela_putorius_furo
ENSHCOG00000010865	rbm17	100	76.905	ENSMLUG00000002302	-	99	76.905	Myotis_lucifugus
ENSHCOG00000010865	rbm17	100	74.224	ENSMLUG00000025709	-	99	73.986	Myotis_lucifugus
ENSHCOG00000010865	rbm17	100	54.893	ENSNGAG00000000663	-	99	54.415	Nannospalax_galili
ENSHCOG00000010865	rbm17	100	78.282	ENSNGAG00000000741	Rbm17	99	78.282	Nannospalax_galili
ENSHCOG00000010865	rbm17	100	81.971	ENSNBRG00000018148	rbm17	99	81.971	Neolamprologus_brichardi
ENSHCOG00000010865	rbm17	100	77.804	ENSNLEG00000033350	RBM17	96	86.555	Nomascus_leucogenys
ENSHCOG00000010865	rbm17	100	72.792	ENSMEUG00000011347	RBM17	99	72.792	Notamacropus_eugenii
ENSHCOG00000010865	rbm17	100	67.542	ENSOPRG00000002993	RBM17	99	67.542	Ochotona_princeps
ENSHCOG00000010865	rbm17	100	78.095	ENSODEG00000004393	RBM17	99	78.095	Octodon_degus
ENSHCOG00000010865	rbm17	97	59.753	ENSODEG00000007286	-	99	58.272	Octodon_degus
ENSHCOG00000010865	rbm17	100	88.249	ENSONIG00000011838	rbm17	99	88.249	Oreochromis_niloticus
ENSHCOG00000010865	rbm17	100	78.282	ENSOANG00000015455	RBM17	99	78.759	Ornithorhynchus_anatinus
ENSHCOG00000010865	rbm17	100	87.351	ENSORLG00000028798	rbm17	99	87.351	Oryzias_latipes
ENSHCOG00000010865	rbm17	100	87.351	ENSORLG00020004593	rbm17	98	87.351	Oryzias_latipes_hni
ENSHCOG00000010865	rbm17	100	87.589	ENSORLG00015000033	rbm17	98	87.589	Oryzias_latipes_hsok
ENSHCOG00000010865	rbm17	100	87.828	ENSOMEG00000012060	rbm17	99	87.828	Oryzias_melastigma
ENSHCOG00000010865	rbm17	100	78.333	ENSOGAG00000015687	RBM17	99	78.520	Otolemur_garnettii
ENSHCOG00000010865	rbm17	100	77.804	ENSOARG00000012975	RBM17	99	77.804	Ovis_aries
ENSHCOG00000010865	rbm17	100	77.804	ENSPPAG00000032347	RBM17	96	86.555	Pan_paniscus
ENSHCOG00000010865	rbm17	100	78.043	ENSPPRG00000010706	RBM17	99	78.043	Panthera_pardus
ENSHCOG00000010865	rbm17	100	78.043	ENSPTIG00000007596	RBM17	99	78.043	Panthera_tigris_altaica
ENSHCOG00000010865	rbm17	100	77.804	ENSPTRG00000002265	RBM17	96	86.555	Pan_troglodytes
ENSHCOG00000010865	rbm17	100	77.804	ENSPANG00000023425	RBM17	95	87.288	Papio_anubis
ENSHCOG00000010865	rbm17	100	80.233	ENSPKIG00000025526	rbm17	99	80.000	Paramormyrops_kingsleyae
ENSHCOG00000010865	rbm17	100	76.815	ENSPKIG00000005048	-	99	77.518	Paramormyrops_kingsleyae
ENSHCOG00000010865	rbm17	100	77.488	ENSPSIG00000012332	RBM17	99	77.488	Pelodiscus_sinensis
ENSHCOG00000010865	rbm17	100	81.295	ENSPMGG00000007980	rbm17	99	81.295	Periophthalmus_magnuspinnatus
ENSHCOG00000010865	rbm17	100	78.282	ENSPEMG00000014320	Rbm17	99	78.282	Peromyscus_maniculatus_bairdii
ENSHCOG00000010865	rbm17	100	77.672	ENSPCIG00000019260	-	99	77.672	Phascolarctos_cinereus
ENSHCOG00000010865	rbm17	100	88.067	ENSPFOG00000013271	rbm17	99	88.067	Poecilia_formosa
ENSHCOG00000010865	rbm17	100	87.589	ENSPLAG00000004455	rbm17	99	87.589	Poecilia_latipinna
ENSHCOG00000010865	rbm17	100	88.067	ENSPMEG00000014864	rbm17	99	88.067	Poecilia_mexicana
ENSHCOG00000010865	rbm17	100	88.067	ENSPREG00000015589	rbm17	99	88.067	Poecilia_reticulata
ENSHCOG00000010865	rbm17	82	56.140	ENSPPYG00000019042	-	100	55.556	Pongo_abelii
ENSHCOG00000010865	rbm17	97	60.442	ENSPPYG00000019881	-	97	59.951	Pongo_abelii
ENSHCOG00000010865	rbm17	100	77.804	ENSPPYG00000002067	RBM17	99	77.804	Pongo_abelii
ENSHCOG00000010865	rbm17	100	70.644	ENSPCAG00000016879	RBM17	99	70.644	Procavia_capensis
ENSHCOG00000010865	rbm17	100	78.043	ENSPCOG00000027881	RBM17	99	78.043	Propithecus_coquereli
ENSHCOG00000010865	rbm17	100	69.212	ENSPVAG00000015499	RBM17	99	68.258	Pteropus_vampyrus
ENSHCOG00000010865	rbm17	100	76.683	ENSPNYG00000015274	rbm17	99	77.163	Pundamilia_nyererei
ENSHCOG00000010865	rbm17	100	80.760	ENSPNAG00000030046	rbm17	99	81.473	Pygocentrus_nattereri
ENSHCOG00000010865	rbm17	100	78.282	ENSRNOG00000018767	Rbm17	99	78.282	Rattus_norvegicus
ENSHCOG00000010865	rbm17	100	77.804	ENSRBIG00000043727	RBM17	95	87.288	Rhinopithecus_bieti
ENSHCOG00000010865	rbm17	100	77.804	ENSRROG00000044142	RBM17	95	87.288	Rhinopithecus_roxellana
ENSHCOG00000010865	rbm17	100	78.043	ENSSBOG00000031661	-	90	88.393	Saimiri_boliviensis_boliviensis
ENSHCOG00000010865	rbm17	100	70.644	ENSSBOG00000023653	-	99	70.406	Saimiri_boliviensis_boliviensis
ENSHCOG00000010865	rbm17	100	78.282	ENSSHAG00000012480	-	99	78.282	Sarcophilus_harrisii
ENSHCOG00000010865	rbm17	100	79.481	ENSSFOG00015009892	rbm17	99	80.189	Scleropages_formosus
ENSHCOG00000010865	rbm17	100	84.884	ENSSMAG00000012368	rbm17	99	84.884	Scophthalmus_maximus
ENSHCOG00000010865	rbm17	100	86.885	ENSSDUG00000015015	rbm17	99	86.885	Seriola_dumerili
ENSHCOG00000010865	rbm17	100	86.885	ENSSLDG00000014486	rbm17	99	86.885	Seriola_lalandi_dorsalis
ENSHCOG00000010865	rbm17	100	78.759	ENSSPUG00000001036	RBM17	99	78.759	Sphenodon_punctatus
ENSHCOG00000010865	rbm17	100	89.976	ENSSPAG00000002338	rbm17	99	89.976	Stegastes_partitus
ENSHCOG00000010865	rbm17	100	77.566	ENSSSCG00000011134	RBM17	99	77.566	Sus_scrofa
ENSHCOG00000010865	rbm17	100	76.850	ENSTGUG00000002013	RBM17	99	77.327	Taeniopygia_guttata
ENSHCOG00000010865	rbm17	100	87.560	ENSTRUG00000010698	rbm17	99	87.560	Takifugu_rubripes
ENSHCOG00000010865	rbm17	100	86.364	ENSTNIG00000006892	rbm17	99	86.364	Tetraodon_nigroviridis
ENSHCOG00000010865	rbm17	100	58.993	ENSTBEG00000014686	RBM17	99	58.993	Tupaia_belangeri
ENSHCOG00000010865	rbm17	90	76.455	ENSTTRG00000001344	RBM17	99	76.455	Tursiops_truncatus
ENSHCOG00000010865	rbm17	100	73.141	ENSUAMG00000009499	RBM17	99	73.141	Ursus_americanus
ENSHCOG00000010865	rbm17	100	78.043	ENSUMAG00000012237	RBM17	99	78.043	Ursus_maritimus
ENSHCOG00000010865	rbm17	100	66.826	ENSVPAG00000005497	RBM17	99	66.826	Vicugna_pacos
ENSHCOG00000010865	rbm17	100	73.141	ENSVVUG00000006780	RBM17	99	75.300	Vulpes_vulpes
ENSHCOG00000010865	rbm17	100	75.120	ENSXETG00000018123	rbm17	100	74.880	Xenopus_tropicalis
ENSHCOG00000010865	rbm17	100	87.260	ENSXMAG00000008674	rbm17	99	88.305	Xiphophorus_maculatus