EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000010953 (Gene tree)
Gene ID: 109517549
Gene Symbol: sar1b
Alias: sara2|zgc:73204
Full Name: secretion associated Ras related GTPase 1B
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 6672 bases
Position: chrKV879709.1:519617-526288
Accession: 109517549
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000008656	MMR_HSR1	PF01926.23	6.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000014575	-	2555	XM_019872770	ENSHCOP00000008656	198 (aa)	XP_019728329	UPI00094E0AFE

Gene Model

Click here to download ENSHCOG00000010953's gene model file

Pathways

Pathway ID	Pathway Name	Source
hcq04141	Protein processing in endoplasmic reticulum	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000010953's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000010953	sar1b	64	33.333	ENSHCOG00000014829	-	66	33.333
ENSHCOG00000010953	sar1b	92	31.183	ENSHCOG00000003724	ARL6	89	31.183
ENSHCOG00000010953	sar1b	86	31.461	ENSHCOG00000008536	-	82	32.402
ENSHCOG00000010953	sar1b	67	34.307	ENSHCOG00000011881	arl4d	68	34.307
ENSHCOG00000010953	sar1b	66	31.852	ENSHCOG00000006452	arl4aa	70	31.852
ENSHCOG00000010953	sar1b	68	34.783	ENSHCOG00000009562	arl14	65	34.783
ENSHCOG00000010953	sar1b	76	31.126	ENSHCOG00000000920	arl8ba	76	31.126
ENSHCOG00000010953	sar1b	76	31.126	ENSHCOG00000010468	arl8bb	76	31.126
ENSHCOG00000010953	sar1b	89	32.222	ENSHCOG00000019844	-	86	32.222
ENSHCOG00000010953	sar1b	100	82.828	ENSHCOG00000002845	sar1ab	80	82.828
ENSHCOG00000010953	sar1b	72	32.432	ENSHCOG00000008233	arl4cb	71	32.432

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000010953	sar1b	100	93.434	ENSAPOG00000007186	sar1b	100	93.434	Acanthochromis_polyacanthus
ENSHCOG00000010953	sar1b	100	84.343	ENSAPOG00000017891	-	100	84.343	Acanthochromis_polyacanthus
ENSHCOG00000010953	sar1b	100	82.828	ENSACIG00000024513	-	100	82.828	Amphilophus_citrinellus
ENSHCOG00000010953	sar1b	100	93.434	ENSACIG00000013634	sar1b	100	93.434	Amphilophus_citrinellus
ENSHCOG00000010953	sar1b	100	84.343	ENSAOCG00000002627	-	100	84.343	Amphiprion_ocellaris
ENSHCOG00000010953	sar1b	100	92.929	ENSAOCG00000005888	sar1b	100	92.929	Amphiprion_ocellaris
ENSHCOG00000010953	sar1b	100	84.343	ENSAPEG00000019680	-	100	84.343	Amphiprion_percula
ENSHCOG00000010953	sar1b	100	92.929	ENSAPEG00000022771	sar1b	100	92.929	Amphiprion_percula
ENSHCOG00000010953	sar1b	100	82.828	ENSATEG00000023368	-	100	82.828	Anabas_testudineus
ENSHCOG00000010953	sar1b	100	92.424	ENSATEG00000012904	sar1b	100	92.424	Anabas_testudineus
ENSHCOG00000010953	sar1b	100	90.404	ENSACAG00000001470	-	100	90.404	Anolis_carolinensis
ENSHCOG00000010953	sar1b	100	93.434	ENSACLG00000014649	sar1b	100	93.434	Astatotilapia_calliptera
ENSHCOG00000010953	sar1b	100	83.838	ENSACLG00000005011	-	100	83.838	Astatotilapia_calliptera
ENSHCOG00000010953	sar1b	100	85.859	ENSAMXG00000034192	-	91	85.859	Astyanax_mexicanus
ENSHCOG00000010953	sar1b	59	94.828	ENSAMXG00000018108	sar1b	83	94.828	Astyanax_mexicanus
ENSHCOG00000010953	sar1b	100	83.838	ENSCSEG00000016976	-	100	83.838	Cynoglossus_semilaevis
ENSHCOG00000010953	sar1b	100	86.364	ENSCSEG00000015238	sar1b	97	86.364	Cynoglossus_semilaevis
ENSHCOG00000010953	sar1b	100	94.444	ENSCVAG00000022959	sar1b	100	94.444	Cyprinodon_variegatus
ENSHCOG00000010953	sar1b	100	94.444	ENSDARG00000103403	sar1b	100	94.444	Danio_rerio
ENSHCOG00000010953	sar1b	99	70.408	FBgn0038947	Sar1	99	70.408	Drosophila_melanogaster
ENSHCOG00000010953	sar1b	97	88.542	ENSEBUG00000011723	sar1b	97	88.542	Eptatretus_burgeri
ENSHCOG00000010953	sar1b	100	94.444	ENSELUG00000020912	sar1b	100	94.444	Esox_lucius
ENSHCOG00000010953	sar1b	100	92.929	ENSFHEG00000019865	sar1b	100	92.929	Fundulus_heteroclitus
ENSHCOG00000010953	sar1b	100	92.929	ENSGMOG00000008023	sar1b	100	92.929	Gadus_morhua
ENSHCOG00000010953	sar1b	100	93.434	ENSGAFG00000007081	sar1b	100	93.434	Gambusia_affinis
ENSHCOG00000010953	sar1b	100	91.919	ENSGACG00000001474	sar1b	100	91.919	Gasterosteus_aculeatus
ENSHCOG00000010953	sar1b	100	83.838	ENSHBUG00000018397	-	100	83.838	Haplochromis_burtoni
ENSHCOG00000010953	sar1b	100	93.434	ENSHBUG00000000915	sar1b	100	93.434	Haplochromis_burtoni
ENSHCOG00000010953	sar1b	100	85.859	ENSIPUG00000010046	sar1b	100	85.859	Ictalurus_punctatus
ENSHCOG00000010953	sar1b	100	92.929	ENSIPUG00000020925	sar1b	100	92.929	Ictalurus_punctatus
ENSHCOG00000010953	sar1b	100	84.343	ENSKMAG00000014875	-	100	84.343	Kryptolebias_marmoratus
ENSHCOG00000010953	sar1b	100	93.939	ENSKMAG00000019693	sar1b	100	93.939	Kryptolebias_marmoratus
ENSHCOG00000010953	sar1b	100	90.909	ENSLBEG00000027550	sar1b	100	90.909	Labrus_bergylta
ENSHCOG00000010953	sar1b	100	84.848	ENSLBEG00000016945	-	100	84.848	Labrus_bergylta
ENSHCOG00000010953	sar1b	100	73.367	ENSLACG00000017029	-	100	73.367	Latimeria_chalumnae
ENSHCOG00000010953	sar1b	100	86.869	ENSLACG00000010795	sar1b	100	86.869	Latimeria_chalumnae
ENSHCOG00000010953	sar1b	100	94.444	ENSLOCG00000010197	sar1b	100	94.444	Lepisosteus_oculatus
ENSHCOG00000010953	sar1b	100	90.404	ENSLOCG00000005214	-	100	90.404	Lepisosteus_oculatus
ENSHCOG00000010953	sar1b	100	91.919	ENSMAMG00000021732	sar1b	100	91.919	Mastacembelus_armatus
ENSHCOG00000010953	sar1b	100	83.838	ENSMZEG00005001012	-	100	83.838	Maylandia_zebra
ENSHCOG00000010953	sar1b	100	93.434	ENSMZEG00005008942	sar1b	100	93.434	Maylandia_zebra
ENSHCOG00000010953	sar1b	90	91.061	ENSMGAG00000005387	-	91	91.061	Meleagris_gallopavo
ENSHCOG00000010953	sar1b	100	83.333	ENSMMOG00000013803	-	100	83.333	Mola_mola
ENSHCOG00000010953	sar1b	100	94.444	ENSMALG00000016635	sar1b	97	92.308	Monopterus_albus
ENSHCOG00000010953	sar1b	100	83.838	ENSNBRG00000014004	-	100	83.838	Neolamprologus_brichardi
ENSHCOG00000010953	sar1b	100	93.434	ENSNBRG00000008013	sar1b	100	93.434	Neolamprologus_brichardi
ENSHCOG00000010953	sar1b	100	93.939	ENSONIG00000017278	sar1b	100	93.939	Oreochromis_niloticus
ENSHCOG00000010953	sar1b	100	92.424	ENSORLG00000000932	sar1b	100	92.424	Oryzias_latipes
ENSHCOG00000010953	sar1b	100	92.424	ENSORLG00020021985	sar1b	100	92.424	Oryzias_latipes_hni
ENSHCOG00000010953	sar1b	100	92.424	ENSORLG00015007044	sar1b	100	92.424	Oryzias_latipes_hsok
ENSHCOG00000010953	sar1b	100	92.929	ENSOMEG00000001052	sar1b	100	92.929	Oryzias_melastigma
ENSHCOG00000010953	sar1b	100	92.929	ENSPKIG00000010688	sar1b	100	92.929	Paramormyrops_kingsleyae
ENSHCOG00000010953	sar1b	100	93.434	ENSPKIG00000017353	-	100	93.434	Paramormyrops_kingsleyae
ENSHCOG00000010953	sar1b	59	95.690	ENSPMGG00000001234	sar1b	91	95.690	Periophthalmus_magnuspinnatus
ENSHCOG00000010953	sar1b	100	84.080	ENSPMAG00000003593	sar1b	100	84.080	Petromyzon_marinus
ENSHCOG00000010953	sar1b	100	92.929	ENSPFOG00000005666	sar1b	100	92.929	Poecilia_formosa
ENSHCOG00000010953	sar1b	59	87.931	ENSPLAG00000001016	-	75	87.931	Poecilia_latipinna
ENSHCOG00000010953	sar1b	100	92.929	ENSPLAG00000012223	sar1b	100	92.929	Poecilia_latipinna
ENSHCOG00000010953	sar1b	100	92.929	ENSPMEG00000016831	sar1b	100	92.929	Poecilia_mexicana
ENSHCOG00000010953	sar1b	100	92.929	ENSPREG00000005312	sar1b	90	92.929	Poecilia_reticulata
ENSHCOG00000010953	sar1b	59	87.931	ENSPREG00000002020	-	86	87.931	Poecilia_reticulata
ENSHCOG00000010953	sar1b	100	83.838	ENSPNYG00000021357	-	100	83.838	Pundamilia_nyererei
ENSHCOG00000010953	sar1b	100	93.434	ENSPNYG00000012440	sar1b	100	93.434	Pundamilia_nyererei
ENSHCOG00000010953	sar1b	100	86.869	ENSPNAG00000001123	-	100	86.869	Pygocentrus_nattereri
ENSHCOG00000010953	sar1b	100	93.939	ENSPNAG00000014683	sar1b	100	93.939	Pygocentrus_nattereri
ENSHCOG00000010953	sar1b	100	92.424	ENSSFOG00015018128	-	100	92.424	Scleropages_formosus
ENSHCOG00000010953	sar1b	100	94.444	ENSSFOG00015020051	sar1b	100	94.444	Scleropages_formosus
ENSHCOG00000010953	sar1b	100	90.909	ENSSMAG00000007106	sar1b	80	90.909	Scophthalmus_maximus
ENSHCOG00000010953	sar1b	100	84.343	ENSSMAG00000002165	-	100	84.343	Scophthalmus_maximus
ENSHCOG00000010953	sar1b	100	94.444	ENSSDUG00000020926	sar1b	100	94.444	Seriola_dumerili
ENSHCOG00000010953	sar1b	100	83.838	ENSSDUG00000019629	-	100	83.838	Seriola_dumerili
ENSHCOG00000010953	sar1b	100	83.838	ENSSLDG00000024197	-	100	83.838	Seriola_lalandi_dorsalis
ENSHCOG00000010953	sar1b	100	94.444	ENSSLDG00000017052	sar1b	100	94.444	Seriola_lalandi_dorsalis
ENSHCOG00000010953	sar1b	100	90.404	ENSSPUG00000010247	-	100	90.404	Sphenodon_punctatus
ENSHCOG00000010953	sar1b	100	83.838	ENSSPAG00000015626	-	100	83.838	Stegastes_partitus
ENSHCOG00000010953	sar1b	100	93.939	ENSSPAG00000017634	sar1b	100	93.939	Stegastes_partitus
ENSHCOG00000010953	sar1b	100	87.374	ENSTRUG00000023908	sar1b	100	87.374	Takifugu_rubripes
ENSHCOG00000010953	sar1b	100	88.889	ENSTNIG00000016097	sar1b	100	88.889	Tetraodon_nigroviridis
ENSHCOG00000010953	sar1b	90	93.258	ENSXCOG00000004160	sar1b	87	93.258	Xiphophorus_couchianus
ENSHCOG00000010953	sar1b	61	84.167	ENSXCOG00000006154	-	81	84.167	Xiphophorus_couchianus
ENSHCOG00000010953	sar1b	100	93.434	ENSXMAG00000008294	sar1b	100	93.434	Xiphophorus_maculatus