EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSHCOG00000011303 (Gene tree)
Gene ID
109514995
Gene Symbol
YTHDF1 (1 of many)
Alias
C20orf21|FLJ20391
Full Name
YTH domain-containing family protein 1-like
Gene Type
protein_coding
Species
Hippocampus_comes
Status
putative
Strand
Plus strand
Length
13988 bases
Position
chrKV879888.1:3844413-3858400
Accession
109514995
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSHCOP00000023068YTHPF04146.156.2e-4111
ENSHCOP00000008953YTHPF04146.157e-4111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSHCOT00000025622YTHDF1 (1 of many)-2022852XM_019868505ENSHCOP00000008953612 (aa)XP_019724064UPI00094E68B2
ENSHCOT00000014936YTHDF1 (1 of many)-2011572-ENSHCOP00000023068523 (aa)--
Gene Model
Click here to download ENSHCOG00000011303's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000011303's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSHCOG00000011303YTHDF19973.404ENSHCOG00000008866ythdf19974.215
ENSHCOG00000011303YTHDF110055.119ENSHCOG00000015277ythdf39757.213
ENSHCOG00000011303YTHDF19756.574ENSHCOG00000015814ythdf210057.165
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSHCOG00000011303YTHDF110074.449ENSG00000149658YTHDF110070.323Homo_sapiens
ENSHCOG00000011303YTHDF110089.871ENSAPOG00000010796YTHDF110089.871Acanthochromis_polyacanthus
ENSHCOG00000011303YTHDF19976.083ENSAPOG00000004358ythdf19975.279Acanthochromis_polyacanthus
ENSHCOG00000011303YTHDF110074.122ENSAMEG00000017323YTHDF19870.867Ailuropoda_melanoleuca
ENSHCOG00000011303YTHDF19678.337ENSACIG00000011264ythdf19078.695Amphilophus_citrinellus
ENSHCOG00000011303YTHDF110090.019ENSACIG00000020083YTHDF19490.262Amphilophus_citrinellus
ENSHCOG00000011303YTHDF19680.156ENSAOCG00000022251ythdf19975.698Amphiprion_ocellaris
ENSHCOG00000011303YTHDF110090.875ENSAOCG00000012567YTHDF110089.871Amphiprion_ocellaris
ENSHCOG00000011303YTHDF110091.065ENSAPEG00000008750YTHDF110090.032Amphiprion_percula
ENSHCOG00000011303YTHDF19976.244ENSAPEG00000021878ythdf19975.279Amphiprion_percula
ENSHCOG00000011303YTHDF110090.943ENSATEG00000005996YTHDF110090.453Anabas_testudineus
ENSHCOG00000011303YTHDF19679.806ENSATEG00000023840ythdf19976.565Anabas_testudineus
ENSHCOG00000011303YTHDF110075.830ENSAPLG00000005985YTHDF19972.340Anas_platyrhynchos
ENSHCOG00000011303YTHDF110075.410ENSACAG00000005560YTHDF110072.903Anolis_carolinensis
ENSHCOG00000011303YTHDF110074.033ENSANAG00000034786-10073.435Aotus_nancymaae
ENSHCOG00000011303YTHDF110061.480ENSANAG00000021022-10059.289Aotus_nancymaae
ENSHCOG00000011303YTHDF110089.924ENSACLG00000025518YTHDF110089.516Astatotilapia_calliptera
ENSHCOG00000011303YTHDF110072.978ENSBTAG00000010383YTHDF110072.571Bos_taurus
ENSHCOG00000011303YTHDF110073.529ENSCJAG00000010056YTHDF110070.000Callithrix_jacchus
ENSHCOG00000011303YTHDF19774.667ENSCAFG00000012772YTHDF19974.763Canis_familiaris
ENSHCOG00000011303YTHDF19774.667ENSCAFG00020001214YTHDF19974.763Canis_lupus_dingo
ENSHCOG00000011303YTHDF110072.509ENSCHIG00000026494YTHDF110068.871Capra_hircus
ENSHCOG00000011303YTHDF110073.358ENSTSYG00000033436YTHDF19970.340Carlito_syrichta
ENSHCOG00000011303YTHDF19972.593ENSCAPG00000002544YTHDF19370.769Cavia_aperea
ENSHCOG00000011303YTHDF110073.519ENSCPOG00000010202YTHDF110070.550Cavia_porcellus
ENSHCOG00000011303YTHDF110073.432ENSCCAG00000024650YTHDF110069.516Cebus_capucinus
ENSHCOG00000011303YTHDF110074.265ENSCATG00000033272YTHDF110070.692Cercocebus_atys
ENSHCOG00000011303YTHDF110073.346ENSCLAG00000005989YTHDF110070.275Chinchilla_lanigera
ENSHCOG00000011303YTHDF110074.265ENSCSAG00000016266YTHDF110070.692Chlorocebus_sabaeus
ENSHCOG00000011303YTHDF110076.296ENSCPBG00000027183YTHDF110071.890Chrysemys_picta_bellii
ENSHCOG00000011303YTHDF110074.449ENSCANG00000029082YTHDF19870.799Colobus_angolensis_palliatus
ENSHCOG00000011303YTHDF110074.033ENSCGRG00001016568Ythdf110070.598Cricetulus_griseus_chok1gshd
ENSHCOG00000011303YTHDF110074.033ENSCGRG00000009207Ythdf110070.492Cricetulus_griseus_crigri
ENSHCOG00000011303YTHDF19677.606ENSCSEG00000020623YTHDF19975.251Cynoglossus_semilaevis
ENSHCOG00000011303YTHDF19878.161ENSCVAG00000017940ythdf19974.720Cyprinodon_variegatus
ENSHCOG00000011303YTHDF110090.114ENSCVAG00000014378YTHDF110089.431Cyprinodon_variegatus
ENSHCOG00000011303YTHDF110079.645ENSDARG00000016447ythdf110078.707Danio_rerio
ENSHCOG00000011303YTHDF110075.786ENSDNOG00000043590YTHDF110072.052Dasypus_novemcinctus
ENSHCOG00000011303YTHDF110072.089ENSDORG00000002879Ythdf19469.435Dipodomys_ordii
ENSHCOG00000011303YTHDF18154.598ENSETEG00000017860-9854.598Echinops_telfairi
ENSHCOG00000011303YTHDF110073.529ENSEASG00005023186YTHDF110070.598Equus_asinus_asinus
ENSHCOG00000011303YTHDF19872.897ENSECAG00000019475YTHDF110073.496Equus_caballus
ENSHCOG00000011303YTHDF19874.200ENSEEUG00000007461YTHDF110073.734Erinaceus_europaeus
ENSHCOG00000011303YTHDF19978.378ENSELUG00000022768ythdf19979.048Esox_lucius
ENSHCOG00000011303YTHDF110081.481ENSELUG00000001906YTHDF19982.123Esox_lucius
ENSHCOG00000011303YTHDF110074.492ENSFCAG00000008917YTHDF110070.968Felis_catus
ENSHCOG00000011303YTHDF110075.368ENSFALG00000010463YTHDF110072.213Ficedula_albicollis
ENSHCOG00000011303YTHDF110072.000ENSFDAG00000019602YTHDF110070.000Fukomys_damarensis
ENSHCOG00000011303YTHDF19878.327ENSFHEG00000023218ythdf19974.639Fundulus_heteroclitus
ENSHCOG00000011303YTHDF110090.341ENSFHEG00000002540YTHDF110088.103Fundulus_heteroclitus
ENSHCOG00000011303YTHDF18495.312ENSGMOG00000019610ythdf19974.759Gadus_morhua
ENSHCOG00000011303YTHDF110075.646ENSGALG00000005745YTHDF110075.379Gallus_gallus
ENSHCOG00000011303YTHDF110088.213ENSGAFG00000021100YTHDF110088.103Gambusia_affinis
ENSHCOG00000011303YTHDF110086.101ENSGACG00000002613YTHDF110083.762Gasterosteus_aculeatus
ENSHCOG00000011303YTHDF19974.839ENSGACG00000012014ythdf19975.161Gasterosteus_aculeatus
ENSHCOG00000011303YTHDF110076.296ENSGAGG00000003007YTHDF110071.890Gopherus_agassizii
ENSHCOG00000011303YTHDF110074.816ENSGGOG00000008340YTHDF110070.645Gorilla_gorilla
ENSHCOG00000011303YTHDF19975.723ENSHBUG00000011284ythdf19974.098Haplochromis_burtoni
ENSHCOG00000011303YTHDF110090.494ENSHBUG00000004875YTHDF110090.000Haplochromis_burtoni
ENSHCOG00000011303YTHDF110071.585ENSHGLG00000006585YTHDF110069.628Heterocephalus_glaber_female
ENSHCOG00000011303YTHDF110071.585ENSHGLG00100004683YTHDF110069.628Heterocephalus_glaber_male
ENSHCOG00000011303YTHDF110080.561ENSIPUG00000000425Ythdf110077.814Ictalurus_punctatus
ENSHCOG00000011303YTHDF110074.122ENSSTOG00000023001YTHDF19969.608Ictidomys_tridecemlineatus
ENSHCOG00000011303YTHDF110073.665ENSJJAG00000013589Ythdf110070.000Jaculus_jaculus
ENSHCOG00000011303YTHDF110091.065ENSKMAG00000017472YTHDF110090.307Kryptolebias_marmoratus
ENSHCOG00000011303YTHDF19679.961ENSKMAG00000005595ythdf19975.444Kryptolebias_marmoratus
ENSHCOG00000011303YTHDF110086.656ENSLBEG00000012068YTHDF110086.334Labrus_bergylta
ENSHCOG00000011303YTHDF19679.142ENSLBEG00000014105ythdf19976.167Labrus_bergylta
ENSHCOG00000011303YTHDF19974.026ENSLACG00000014195YTHDF19873.621Latimeria_chalumnae
ENSHCOG00000011303YTHDF110076.861ENSLOCG00000005020ythdf110075.890Lepisosteus_oculatus
ENSHCOG00000011303YTHDF110074.128ENSLAFG00000008884YTHDF110070.161Loxodonta_africana
ENSHCOG00000011303YTHDF110074.265ENSMFAG00000042868YTHDF110070.692Macaca_fascicularis
ENSHCOG00000011303YTHDF110074.265ENSMMUG00000009227YTHDF110070.692Macaca_mulatta
ENSHCOG00000011303YTHDF110074.265ENSMNEG00000030851YTHDF110070.692Macaca_nemestrina
ENSHCOG00000011303YTHDF110074.265ENSMLEG00000009252YTHDF110070.588Mandrillus_leucophaeus
ENSHCOG00000011303YTHDF110091.477ENSMAMG00000011072YTHDF110089.968Mastacembelus_armatus
ENSHCOG00000011303YTHDF19676.893ENSMAMG00000024255ythdf19973.323Mastacembelus_armatus
ENSHCOG00000011303YTHDF19975.923ENSMZEG00005026397ythdf19975.159Maylandia_zebra
ENSHCOG00000011303YTHDF110090.494ENSMZEG00005023596YTHDF110090.000Maylandia_zebra
ENSHCOG00000011303YTHDF110075.646ENSMGAG00000006139YTHDF19972.177Meleagris_gallopavo
ENSHCOG00000011303YTHDF110073.665ENSMAUG00000017660Ythdf110070.436Mesocricetus_auratus
ENSHCOG00000011303YTHDF110073.162ENSMICG00000032266YTHDF110069.839Microcebus_murinus
ENSHCOG00000011303YTHDF110073.849ENSMOCG00000013573Ythdf110070.921Microtus_ochrogaster
ENSHCOG00000011303YTHDF19674.364ENSMMOG00000017500ythdf19774.461Mola_mola
ENSHCOG00000011303YTHDF19986.201ENSMMOG00000020467YTHDF19987.338Mola_mola
ENSHCOG00000011303YTHDF19774.953ENSMODG00000016842YTHDF110074.573Monodelphis_domestica
ENSHCOG00000011303YTHDF19677.714ENSMALG00000015672ythdf19973.311Monopterus_albus
ENSHCOG00000011303YTHDF110089.015ENSMALG00000022209YTHDF110088.853Monopterus_albus
ENSHCOG00000011303YTHDF110073.481MGP_CAROLIEiJ_G0024790Ythdf110069.952Mus_caroli
ENSHCOG00000011303YTHDF110073.481ENSMUSG00000038848Ythdf110069.952Mus_musculus
ENSHCOG00000011303YTHDF110073.481MGP_PahariEiJ_G0026237Ythdf110070.113Mus_pahari
ENSHCOG00000011303YTHDF110073.481MGP_SPRETEiJ_G0025715Ythdf110069.952Mus_spretus
ENSHCOG00000011303YTHDF19771.209ENSMPUG00000008111YTHDF110073.004Mustela_putorius_furo
ENSHCOG00000011303YTHDF110074.128ENSMLUG00000002241YTHDF19373.761Myotis_lucifugus
ENSHCOG00000011303YTHDF110073.665ENSNGAG00000000334Ythdf110070.275Nannospalax_galili
ENSHCOG00000011303YTHDF19976.252ENSNBRG00000008213ythdf19876.190Neolamprologus_brichardi
ENSHCOG00000011303YTHDF110090.494ENSNBRG00000015321YTHDF19989.316Neolamprologus_brichardi
ENSHCOG00000011303YTHDF19869.290ENSOPRG00000001758-9569.804Ochotona_princeps
ENSHCOG00000011303YTHDF110073.247ENSODEG00000004380-10069.952Octodon_degus
ENSHCOG00000011303YTHDF18377.232ENSODEG00000000074-10058.576Octodon_degus
ENSHCOG00000011303YTHDF19675.551ENSONIG00000016799ythdf19975.574Oreochromis_niloticus
ENSHCOG00000011303YTHDF110075.277ENSOANG00000003723YTHDF110072.213Ornithorhynchus_anatinus
ENSHCOG00000011303YTHDF19975.602ENSORLG00000014665YTHDF19975.160Oryzias_latipes
ENSHCOG00000011303YTHDF110087.290ENSORLG00000009739YTHDF110087.987Oryzias_latipes
ENSHCOG00000011303YTHDF110086.542ENSORLG00020001332YTHDF110087.825Oryzias_latipes_hni
ENSHCOG00000011303YTHDF19975.884ENSORLG00020000307ythdf19975.441Oryzias_latipes_hni
ENSHCOG00000011303YTHDF110086.916ENSORLG00015018321YTHDF110087.662Oryzias_latipes_hsok
ENSHCOG00000011303YTHDF19975.723ENSORLG00015006302ythdf19975.281Oryzias_latipes_hsok
ENSHCOG00000011303YTHDF19679.383ENSOMEG00000002941YTHDF19976.006Oryzias_melastigma
ENSHCOG00000011303YTHDF110087.175ENSOMEG00000011843YTHDF110087.175Oryzias_melastigma
ENSHCOG00000011303YTHDF110073.112ENSOGAG00000000480YTHDF110068.871Otolemur_garnettii
ENSHCOG00000011303YTHDF110071.940ENSOARG00000011639YTHDF19372.505Ovis_aries
ENSHCOG00000011303YTHDF110074.816ENSPPAG00000023277YTHDF110070.588Pan_paniscus
ENSHCOG00000011303YTHDF110074.677ENSPPRG00000020805YTHDF110070.921Panthera_pardus
ENSHCOG00000011303YTHDF110071.591ENSPTIG00000017355YTHDF19679.600Panthera_tigris_altaica
ENSHCOG00000011303YTHDF110074.816ENSPTRG00000013730YTHDF110070.645Pan_troglodytes
ENSHCOG00000011303YTHDF110074.265ENSPANG00000021472YTHDF110070.692Papio_anubis
ENSHCOG00000011303YTHDF19874.906ENSPKIG00000005026YTHDF19872.927Paramormyrops_kingsleyae
ENSHCOG00000011303YTHDF110072.998ENSPKIG00000005427ythdf110069.329Paramormyrops_kingsleyae
ENSHCOG00000011303YTHDF19975.327ENSPSIG00000005529YTHDF19873.266Pelodiscus_sinensis
ENSHCOG00000011303YTHDF110085.435ENSPMGG00000009101YTHDF19985.714Periophthalmus_magnuspinnatus
ENSHCOG00000011303YTHDF19676.449ENSPMGG00000015328ythdf19775.559Periophthalmus_magnuspinnatus
ENSHCOG00000011303YTHDF110073.849ENSPEMG00000020199Ythdf19971.675Peromyscus_maniculatus_bairdii
ENSHCOG00000011303YTHDF19975.281ENSPCIG00000017170YTHDF110075.142Phascolarctos_cinereus
ENSHCOG00000011303YTHDF19975.362ENSPFOG00000005405ythdf19974.799Poecilia_formosa
ENSHCOG00000011303YTHDF19878.343ENSPLAG00000006653ythdf19974.799Poecilia_latipinna
ENSHCOG00000011303YTHDF110088.264ENSPLAG00000006298YTHDF110088.264Poecilia_latipinna
ENSHCOG00000011303YTHDF110088.424ENSPMEG00000020969-10088.424Poecilia_mexicana
ENSHCOG00000011303YTHDF19877.547ENSPMEG00000023753ythdf19974.917Poecilia_mexicana
ENSHCOG00000011303YTHDF19878.450ENSPREG00000002173ythdf19975.208Poecilia_reticulata
ENSHCOG00000011303YTHDF19787.934ENSPREG00000017662YTHDF19887.934Poecilia_reticulata
ENSHCOG00000011303YTHDF18689.604ENSPPYG00000011226YTHDF19589.604Pongo_abelii
ENSHCOG00000011303YTHDF19471.622ENSPCAG00000002452YTHDF19871.206Procavia_capensis
ENSHCOG00000011303YTHDF110073.665ENSPCOG00000025969YTHDF110069.952Propithecus_coquereli
ENSHCOG00000011303YTHDF19969.697ENSPVAG00000017568YTHDF19967.172Pteropus_vampyrus
ENSHCOG00000011303YTHDF110090.494ENSPNYG00000002266YTHDF110090.000Pundamilia_nyererei
ENSHCOG00000011303YTHDF19975.723ENSPNYG00000014007ythdf19974.751Pundamilia_nyererei
ENSHCOG00000011303YTHDF110079.677ENSPNAG00000012447ythdf110080.160Pygocentrus_nattereri
ENSHCOG00000011303YTHDF110073.849ENSRNOG00000027015Ythdf110070.275Rattus_norvegicus
ENSHCOG00000011303YTHDF110073.665ENSRBIG00000044959YTHDF110070.048Rhinopithecus_bieti
ENSHCOG00000011303YTHDF110073.665ENSRROG00000033014YTHDF110070.048Rhinopithecus_roxellana
ENSHCOG00000011303YTHDF110072.610ENSSBOG00000027278YTHDF110071.970Saimiri_boliviensis_boliviensis
ENSHCOG00000011303YTHDF110075.786ENSSHAG00000010430YTHDF18971.707Sarcophilus_harrisii
ENSHCOG00000011303YTHDF110078.102ENSSFOG00015000284ythdf110077.814Scleropages_formosus
ENSHCOG00000011303YTHDF19891.057ENSSMAG00000007635YTHDF19884.893Scophthalmus_maximus
ENSHCOG00000011303YTHDF17889.172ENSSMAG00000013715ythdf19581.781Scophthalmus_maximus
ENSHCOG00000011303YTHDF19679.048ENSSDUG00000000435ythdf19876.087Seriola_dumerili
ENSHCOG00000011303YTHDF110089.773ENSSDUG00000015823YTHDF110086.593Seriola_dumerili
ENSHCOG00000011303YTHDF19975.929ENSSLDG00000024948ythdf19975.441Seriola_lalandi_dorsalis
ENSHCOG00000011303YTHDF110086.867ENSSLDG00000001054YTHDF110087.420Seriola_lalandi_dorsalis
ENSHCOG00000011303YTHDF19775.810ENSSPUG00000015143YTHDF110076.000Sphenodon_punctatus
ENSHCOG00000011303YTHDF110090.114ENSSPAG00000003666YTHDF110089.228Stegastes_partitus
ENSHCOG00000011303YTHDF19975.040ENSSPAG00000014989ythdf19975.641Stegastes_partitus
ENSHCOG00000011303YTHDF110072.037ENSSSCG00000040086YTHDF110069.194Sus_scrofa
ENSHCOG00000011303YTHDF110075.646ENSTGUG00000007565YTHDF110072.177Taeniopygia_guttata
ENSHCOG00000011303YTHDF19975.856ENSTRUG00000004288ythdf19976.451Takifugu_rubripes
ENSHCOG00000011303YTHDF19487.350ENSTRUG00000005049YTHDF19986.522Takifugu_rubripes
ENSHCOG00000011303YTHDF19975.655ENSTNIG00000012490ythdf19973.322Tetraodon_nigroviridis
ENSHCOG00000011303YTHDF110083.521ENSTNIG00000003975YTHDF110077.170Tetraodon_nigroviridis
ENSHCOG00000011303YTHDF19972.097ENSTTRG00000001804YTHDF19970.000Tursiops_truncatus
ENSHCOG00000011303YTHDF110074.170ENSUAMG00000011021YTHDF110074.194Ursus_americanus
ENSHCOG00000011303YTHDF19773.905ENSUMAG00000022290YTHDF110074.194Ursus_maritimus
ENSHCOG00000011303YTHDF19774.046ENSVVUG00000015275YTHDF19974.144Vulpes_vulpes
ENSHCOG00000011303YTHDF19875.881ENSXETG00000027086ythdf19773.480Xenopus_tropicalis
ENSHCOG00000011303YTHDF19887.336ENSXCOG00000008115YTHDF19987.336Xiphophorus_couchianus
ENSHCOG00000011303YTHDF19878.072ENSXCOG00000002490ythdf19474.483Xiphophorus_couchianus
ENSHCOG00000011303YTHDF19878.302ENSXMAG00000008525ythdf19974.637Xiphophorus_maculatus
ENSHCOG00000011303YTHDF110090.494ENSXMAG00000015644YTHDF110088.103Xiphophorus_maculatus

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