EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000011413 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 513 bases
Position: chrKV880522.1:1085622-1086134
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000023137	RRM_5	PF13893.6	7.2e-07	1	1
ENSHCOP00000023137	RRM_1	PF00076.22	2.3e-28	1	2
ENSHCOP00000023137	RRM_1	PF00076.22	2.3e-28	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000015069	-	513	-	ENSHCOP00000023137	170 (aa)	-	-

Gene Model

Click here to download ENSHCOG00000011413's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000011413's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000011413	-	95	46.914	ENSHCOG00000012571	rbm14b	97	50.365

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000011413	-	82	81.429	ENSAPOG00000012375	-	96	81.429	Acanthochromis_polyacanthus
ENSHCOG00000011413	-	82	80.000	ENSACIG00000016472	-	85	80.000	Amphilophus_citrinellus
ENSHCOG00000011413	-	82	82.857	ENSAOCG00000010907	-	96	82.857	Amphiprion_ocellaris
ENSHCOG00000011413	-	96	73.780	ENSAPEG00000009476	-	100	73.780	Amphiprion_percula
ENSHCOG00000011413	-	81	81.022	ENSATEG00000001912	-	90	81.022	Anabas_testudineus
ENSHCOG00000011413	-	82	55.000	ENSAMXG00000032121	rbm4.2	88	55.000	Astyanax_mexicanus
ENSHCOG00000011413	-	81	49.275	ENSCPBG00000023666	-	92	49.275	Chrysemys_picta_bellii
ENSHCOG00000011413	-	82	66.906	ENSCSEG00000007739	-	99	66.906	Cynoglossus_semilaevis
ENSHCOG00000011413	-	99	61.404	ENSDARG00000036386	rbm4.1	98	61.404	Danio_rerio
ENSHCOG00000011413	-	81	50.725	ENSDARG00000044545	zgc:77262	51	47.337	Danio_rerio
ENSHCOG00000011413	-	81	56.429	ENSEBUG00000007174	-	88	56.429	Eptatretus_burgeri
ENSHCOG00000011413	-	86	72.109	ENSFHEG00000003483	-	97	72.109	Fundulus_heteroclitus
ENSHCOG00000011413	-	89	73.510	ENSGAFG00000019301	-	99	73.510	Gambusia_affinis
ENSHCOG00000011413	-	81	49.275	ENSGAGG00000014558	-	92	49.275	Gopherus_agassizii
ENSHCOG00000011413	-	91	76.623	ENSHBUG00000011624	-	95	76.623	Haplochromis_burtoni
ENSHCOG00000011413	-	81	80.435	ENSLBEG00000019756	-	86	80.435	Labrus_bergylta
ENSHCOG00000011413	-	81	52.174	ENSLACG00000006343	zgc:77262	58	47.024	Latimeria_chalumnae
ENSHCOG00000011413	-	81	61.594	ENSLOCG00000002772	rbm4.1	99	61.594	Lepisosteus_oculatus
ENSHCOG00000011413	-	81	81.752	ENSMZEG00005028160	-	93	81.752	Maylandia_zebra
ENSHCOG00000011413	-	82	53.571	ENSMZEG00005028161	-	77	53.571	Maylandia_zebra
ENSHCOG00000011413	-	84	73.427	ENSMZEG00005009210	-	80	73.427	Maylandia_zebra
ENSHCOG00000011413	-	81	81.884	ENSMMOG00000020484	-	86	81.884	Mola_mola
ENSHCOG00000011413	-	91	76.623	ENSNBRG00000017763	-	95	76.623	Neolamprologus_brichardi
ENSHCOG00000011413	-	85	64.384	ENSPKIG00000020805	rbm4.1	85	65.942	Paramormyrops_kingsleyae
ENSHCOG00000011413	-	82	65.000	ENSPMGG00000004331	rbm4.1	93	65.000	Periophthalmus_magnuspinnatus
ENSHCOG00000011413	-	81	52.555	ENSPMAG00000003433	rbm4.2	69	52.555	Petromyzon_marinus
ENSHCOG00000011413	-	81	78.261	ENSPLAG00000018569	-	88	78.261	Poecilia_latipinna
ENSHCOG00000011413	-	81	78.261	ENSPMEG00000006278	-	88	78.261	Poecilia_mexicana
ENSHCOG00000011413	-	91	76.623	ENSPNYG00000004649	-	95	76.623	Pundamilia_nyererei
ENSHCOG00000011413	-	81	51.493	ENSSFOG00015018567	zgc:77262	89	51.493	Scleropages_formosus
ENSHCOG00000011413	-	94	76.101	ENSSMAG00000007575	-	99	76.101	Scophthalmus_maximus
ENSHCOG00000011413	-	89	72.848	ENSXCOG00000003730	-	94	72.848	Xiphophorus_couchianus