EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000011455 (Gene tree)
Gene ID: -
Gene Symbol: blm
Alias: -
Full Name: BLM RecQ like helicase
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 8296 bases
Position: chrKV879791.1:146276-154571
Accession: 109531340
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000023146	HRDC	PF00570.23	2.6e-14	1	1
ENSHCOP00000023146	BDHCT	PF08072.11	6.7e-14	1	1
ENSHCOP00000023146	DEAD	PF00270.29	4e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000015086	-	2901	XM_019895588	ENSHCOP00000023146	966 (aa)	XP_019751147	-

Gene Model

Click here to download ENSHCOG00000011455's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000011455's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000011455	blm	59	37.221	ENSHCOG00000012735	recql	89	37.221

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000011455	blm	99	54.554	ENSG00000197299	BLM	71	58.056	Homo_sapiens
ENSHCOG00000011455	blm	100	68.989	ENSAPOG00000017966	blm	77	69.685	Acanthochromis_polyacanthus
ENSHCOG00000011455	blm	79	64.322	ENSAMEG00000013843	BLM	74	54.000	Ailuropoda_melanoleuca
ENSHCOG00000011455	blm	99	72.075	ENSACIG00000023762	blm	73	70.000	Amphilophus_citrinellus
ENSHCOG00000011455	blm	100	68.887	ENSAOCG00000003318	blm	76	69.106	Amphiprion_ocellaris
ENSHCOG00000011455	blm	100	68.887	ENSAPEG00000018105	blm	74	69.106	Amphiprion_percula
ENSHCOG00000011455	blm	100	74.818	ENSATEG00000006421	blm	76	70.706	Anabas_testudineus
ENSHCOG00000011455	blm	91	56.210	ENSAPLG00000006878	BLM	77	56.865	Anas_platyrhynchos
ENSHCOG00000011455	blm	80	63.239	ENSACAG00000014275	BLM	74	53.816	Anolis_carolinensis
ENSHCOG00000011455	blm	83	61.039	ENSANAG00000038415	BLM	71	56.933	Aotus_nancymaae
ENSHCOG00000011455	blm	100	84.375	ENSACLG00000020354	blm	70	84.375	Astatotilapia_calliptera
ENSHCOG00000011455	blm	89	69.014	ENSAMXG00000016970	blm	75	61.575	Astyanax_mexicanus
ENSHCOG00000011455	blm	72	72.390	ENSBTAG00000020301	BLM	57	70.897	Bos_taurus
ENSHCOG00000011455	blm	68	39.831	WBGene00001865	him-6	85	37.117	Caenorhabditis_elegans
ENSHCOG00000011455	blm	99	54.406	ENSCJAG00000009803	BLM	71	57.124	Callithrix_jacchus
ENSHCOG00000011455	blm	83	60.941	ENSCAFG00000012385	BLM	74	55.355	Canis_familiaris
ENSHCOG00000011455	blm	83	60.941	ENSCAFG00020016111	BLM	90	65.067	Canis_lupus_dingo
ENSHCOG00000011455	blm	72	72.664	ENSCHIG00000010329	BLM	57	70.897	Capra_hircus
ENSHCOG00000011455	blm	88	61.302	ENSTSYG00000012368	BLM	74	54.632	Carlito_syrichta
ENSHCOG00000011455	blm	72	71.739	ENSCAPG00000017976	BLM	73	58.312	Cavia_aperea
ENSHCOG00000011455	blm	83	62.143	ENSCPOG00000001761	BLM	73	54.159	Cavia_porcellus
ENSHCOG00000011455	blm	99	54.406	ENSCCAG00000023069	BLM	74	55.153	Cebus_capucinus
ENSHCOG00000011455	blm	99	54.210	ENSCATG00000040609	BLM	91	68.392	Cercocebus_atys
ENSHCOG00000011455	blm	83	62.172	ENSCLAG00000012111	BLM	74	54.823	Chinchilla_lanigera
ENSHCOG00000011455	blm	99	54.080	ENSCSAG00000017040	BLM	73	55.100	Chlorocebus_sabaeus
ENSHCOG00000011455	blm	91	50.515	ENSCHOG00000006255	BLM	69	51.875	Choloepus_hoffmanni
ENSHCOG00000011455	blm	99	55.253	ENSCPBG00000025000	BLM	93	55.102	Chrysemys_picta_bellii
ENSHCOG00000011455	blm	55	39.360	ENSCSAVG00000007521	-	89	39.292	Ciona_savignyi
ENSHCOG00000011455	blm	78	55.000	ENSCANG00000034808	BLM	67	55.000	Colobus_angolensis_palliatus
ENSHCOG00000011455	blm	83	62.892	ENSCGRG00001024897	Blm	74	55.587	Cricetulus_griseus_chok1gshd
ENSHCOG00000011455	blm	100	68.436	ENSCSEG00000013483	blm	79	68.756	Cynoglossus_semilaevis
ENSHCOG00000011455	blm	66	67.512	ENSCVAG00000017583	blm	67	67.512	Cyprinodon_variegatus
ENSHCOG00000011455	blm	90	68.531	ENSDARG00000077089	blm	64	70.161	Danio_rerio
ENSHCOG00000011455	blm	84	60.854	ENSDNOG00000010159	BLM	60	60.644	Dasypus_novemcinctus
ENSHCOG00000011455	blm	99	54.833	ENSDORG00000011033	Blm	99	55.619	Dipodomys_ordii
ENSHCOG00000011455	blm	73	41.883	FBgn0002906	Blm	52	40.482	Drosophila_melanogaster
ENSHCOG00000011455	blm	88	43.165	ENSETEG00000015019	BLM	65	43.165	Echinops_telfairi
ENSHCOG00000011455	blm	62	59.801	ENSEBUG00000015743	-	99	53.333	Eptatretus_burgeri
ENSHCOG00000011455	blm	83	58.413	ENSEASG00005006727	BLM	74	52.459	Equus_asinus_asinus
ENSHCOG00000011455	blm	83	61.137	ENSECAG00000011405	BLM	74	54.830	Equus_caballus
ENSHCOG00000011455	blm	83	60.689	ENSEEUG00000001434	BLM	75	54.528	Erinaceus_europaeus
ENSHCOG00000011455	blm	99	65.921	ENSELUG00000019098	blm	71	65.819	Esox_lucius
ENSHCOG00000011455	blm	83	61.593	ENSFCAG00000006087	BLM	57	66.783	Felis_catus
ENSHCOG00000011455	blm	86	57.503	ENSFALG00000010981	BLM	83	51.570	Ficedula_albicollis
ENSHCOG00000011455	blm	83	54.470	ENSFDAG00000012658	BLM	72	49.190	Fukomys_damarensis
ENSHCOG00000011455	blm	100	69.032	ENSFHEG00000002553	blm	75	68.840	Fundulus_heteroclitus
ENSHCOG00000011455	blm	99	61.969	ENSGMOG00000016431	blm	99	66.287	Gadus_morhua
ENSHCOG00000011455	blm	89	57.080	ENSGALG00000008256	BLM	64	58.333	Gallus_gallus
ENSHCOG00000011455	blm	100	67.826	ENSGAFG00000001117	blm	79	68.370	Gambusia_affinis
ENSHCOG00000011455	blm	100	69.084	ENSGACG00000010863	blm	100	85.985	Gasterosteus_aculeatus
ENSHCOG00000011455	blm	86	54.015	ENSGAGG00000005383	BLM	93	54.015	Gopherus_agassizii
ENSHCOG00000011455	blm	99	53.985	ENSGGOG00000007710	BLM	91	68.306	Gorilla_gorilla
ENSHCOG00000011455	blm	100	71.209	ENSHBUG00000015943	blm	75	71.251	Haplochromis_burtoni
ENSHCOG00000011455	blm	83	62.331	ENSHGLG00000013231	BLM	60	61.449	Heterocephalus_glaber_female
ENSHCOG00000011455	blm	100	62.993	ENSIPUG00000000529	blm	85	62.791	Ictalurus_punctatus
ENSHCOG00000011455	blm	83	61.420	ENSSTOG00000005000	BLM	61	60.641	Ictidomys_tridecemlineatus
ENSHCOG00000011455	blm	83	56.028	ENSJJAG00000016322	Blm	99	50.430	Jaculus_jaculus
ENSHCOG00000011455	blm	100	69.668	ENSKMAG00000016608	blm	75	69.442	Kryptolebias_marmoratus
ENSHCOG00000011455	blm	84	75.761	ENSLBEG00000018729	blm	96	75.761	Labrus_bergylta
ENSHCOG00000011455	blm	84	64.211	ENSLACG00000006490	BLM	73	56.420	Latimeria_chalumnae
ENSHCOG00000011455	blm	100	58.902	ENSLOCG00000014302	blm	76	58.667	Lepisosteus_oculatus
ENSHCOG00000011455	blm	99	54.416	ENSMFAG00000042982	BLM	90	68.956	Macaca_fascicularis
ENSHCOG00000011455	blm	99	54.416	ENSMMUG00000019526	BLM	90	68.956	Macaca_mulatta
ENSHCOG00000011455	blm	99	54.321	ENSMNEG00000031251	BLM	90	68.681	Macaca_nemestrina
ENSHCOG00000011455	blm	99	51.616	ENSMLEG00000032934	BLM	73	52.290	Mandrillus_leucophaeus
ENSHCOG00000011455	blm	99	70.701	ENSMAMG00000008726	blm	75	70.605	Mastacembelus_armatus
ENSHCOG00000011455	blm	100	71.167	ENSMZEG00005022323	blm	74	71.305	Maylandia_zebra
ENSHCOG00000011455	blm	60	58.433	ENSMGAG00000010473	BLM	99	59.014	Meleagris_gallopavo
ENSHCOG00000011455	blm	83	62.291	ENSMAUG00000008953	Blm	73	55.439	Mesocricetus_auratus
ENSHCOG00000011455	blm	99	54.234	ENSMICG00000034442	BLM	73	55.396	Microcebus_murinus
ENSHCOG00000011455	blm	83	62.802	ENSMOCG00000016367	Blm	73	55.182	Microtus_ochrogaster
ENSHCOG00000011455	blm	100	69.179	ENSMMOG00000006959	blm	76	69.179	Mola_mola
ENSHCOG00000011455	blm	84	60.141	ENSMODG00000019449	BLM	59	59.954	Monodelphis_domestica
ENSHCOG00000011455	blm	100	70.190	ENSMALG00000007323	blm	75	70.190	Monopterus_albus
ENSHCOG00000011455	blm	83	61.337	MGP_CAROLIEiJ_G0029907	Blm	73	54.458	Mus_caroli
ENSHCOG00000011455	blm	83	61.814	ENSMUSG00000030528	Blm	73	54.728	Mus_musculus
ENSHCOG00000011455	blm	83	62.440	MGP_PahariEiJ_G0013129	Blm	73	55.545	Mus_pahari
ENSHCOG00000011455	blm	83	61.859	MGP_SPRETEiJ_G0031009	Blm	73	54.676	Mus_spretus
ENSHCOG00000011455	blm	62	66.504	ENSMPUG00000015657	BLM	68	56.407	Mustela_putorius_furo
ENSHCOG00000011455	blm	83	61.329	ENSMLUG00000014697	BLM	74	54.866	Myotis_lucifugus
ENSHCOG00000011455	blm	83	61.290	ENSNGAG00000001275	Blm	74	54.321	Nannospalax_galili
ENSHCOG00000011455	blm	100	70.878	ENSNBRG00000019702	blm	74	71.017	Neolamprologus_brichardi
ENSHCOG00000011455	blm	99	52.751	ENSNLEG00000012087	BLM	99	52.612	Nomascus_leucogenys
ENSHCOG00000011455	blm	82	57.055	ENSMEUG00000007253	BLM	60	55.751	Notamacropus_eugenii
ENSHCOG00000011455	blm	73	65.966	ENSOPRG00000011667	BLM	51	65.966	Ochotona_princeps
ENSHCOG00000011455	blm	99	51.538	ENSODEG00000015373	BLM	99	51.916	Octodon_degus
ENSHCOG00000011455	blm	100	70.678	ENSONIG00000015193	blm	73	70.571	Oreochromis_niloticus
ENSHCOG00000011455	blm	77	64.304	ENSOANG00000009316	-	100	64.304	Ornithorhynchus_anatinus
ENSHCOG00000011455	blm	83	61.649	ENSOCUG00000013969	BLM	73	54.198	Oryctolagus_cuniculus
ENSHCOG00000011455	blm	100	70.374	ENSORLG00000008110	blm	75	70.154	Oryzias_latipes
ENSHCOG00000011455	blm	100	70.086	ENSORLG00020004812	blm	75	69.866	Oryzias_latipes_hni
ENSHCOG00000011455	blm	100	71.869	ENSORLG00015018640	blm	99	71.443	Oryzias_latipes_hsok
ENSHCOG00000011455	blm	100	69.942	ENSOMEG00000023545	blm	75	69.866	Oryzias_melastigma
ENSHCOG00000011455	blm	99	54.231	ENSOGAG00000005708	BLM	74	54.023	Otolemur_garnettii
ENSHCOG00000011455	blm	83	61.747	ENSOARG00000012875	BLM	60	61.309	Ovis_aries
ENSHCOG00000011455	blm	99	54.269	ENSPPAG00000032173	BLM	71	57.790	Pan_paniscus
ENSHCOG00000011455	blm	83	61.848	ENSPPRG00000002471	BLM	57	67.308	Panthera_pardus
ENSHCOG00000011455	blm	99	54.253	ENSPTIG00000016168	BLM	74	54.253	Panthera_tigris_altaica
ENSHCOG00000011455	blm	99	54.175	ENSPTRG00000007460	BLM	73	55.534	Pan_troglodytes
ENSHCOG00000011455	blm	99	54.321	ENSPANG00000018572	BLM	90	68.956	Papio_anubis
ENSHCOG00000011455	blm	89	69.494	ENSPKIG00000008954	blm	65	67.865	Paramormyrops_kingsleyae
ENSHCOG00000011455	blm	58	68.694	ENSPSIG00000009792	BLM	99	68.694	Pelodiscus_sinensis
ENSHCOG00000011455	blm	94	70.215	ENSPMGG00000006629	blm	99	70.582	Periophthalmus_magnuspinnatus
ENSHCOG00000011455	blm	83	61.695	ENSPEMG00000017348	Blm	61	61.246	Peromyscus_maniculatus_bairdii
ENSHCOG00000011455	blm	67	63.190	ENSPMAG00000000445	blm	99	58.422	Petromyzon_marinus
ENSHCOG00000011455	blm	82	60.770	ENSPCIG00000006609	BLM	59	59.379	Phascolarctos_cinereus
ENSHCOG00000011455	blm	100	67.433	ENSPFOG00000005059	blm	74	68.451	Poecilia_formosa
ENSHCOG00000011455	blm	100	68.054	ENSPLAG00000017344	blm	74	68.511	Poecilia_latipinna
ENSHCOG00000011455	blm	100	67.433	ENSPMEG00000000321	blm	74	68.451	Poecilia_mexicana
ENSHCOG00000011455	blm	100	67.216	ENSPREG00000007715	blm	74	67.847	Poecilia_reticulata
ENSHCOG00000011455	blm	99	53.321	ENSPPYG00000006784	BLM	73	54.364	Pongo_abelii
ENSHCOG00000011455	blm	83	60.096	ENSPCAG00000008960	BLM	61	59.306	Procavia_capensis
ENSHCOG00000011455	blm	99	48.902	ENSPCOG00000000439	BLM	72	48.811	Propithecus_coquereli
ENSHCOG00000011455	blm	72	76.721	ENSPVAG00000011642	BLM	50	76.721	Pteropus_vampyrus
ENSHCOG00000011455	blm	100	61.855	ENSPNYG00000010956	blm	72	62.644	Pundamilia_nyererei
ENSHCOG00000011455	blm	100	62.925	ENSPNAG00000011714	blm	75	63.208	Pygocentrus_nattereri
ENSHCOG00000011455	blm	83	61.529	ENSRNOG00000011213	Blm	74	54.067	Rattus_norvegicus
ENSHCOG00000011455	blm	99	54.269	ENSRBIG00000029656	BLM	91	69.126	Rhinopithecus_bieti
ENSHCOG00000011455	blm	99	54.511	ENSRROG00000037871	BLM	91	69.126	Rhinopithecus_roxellana
ENSHCOG00000011455	blm	70	68.373	ENSSBOG00000030957	BLM	71	57.257	Saimiri_boliviensis_boliviensis
ENSHCOG00000011455	blm	82	62.015	ENSSHAG00000007988	BLM	62	59.954	Sarcophilus_harrisii
ENSHCOG00000011455	blm	100	63.956	ENSSFOG00015015462	blm	79	63.755	Scleropages_formosus
ENSHCOG00000011455	blm	100	68.446	ENSSMAG00000001120	blm	76	68.762	Scophthalmus_maximus
ENSHCOG00000011455	blm	100	74.636	ENSSDUG00000010955	blm	75	70.409	Seriola_dumerili
ENSHCOG00000011455	blm	100	70.000	ENSSLDG00000000634	blm	75	70.219	Seriola_lalandi_dorsalis
ENSHCOG00000011455	blm	83	57.295	ENSSARG00000006398	BLM	78	50.806	Sorex_araneus
ENSHCOG00000011455	blm	99	52.450	ENSSPUG00000000013	BLM	92	52.975	Sphenodon_punctatus
ENSHCOG00000011455	blm	97	74.738	ENSSPAG00000013999	blm	74	70.345	Stegastes_partitus
ENSHCOG00000011455	blm	84	62.057	ENSSSCG00000001816	BLM	72	55.734	Sus_scrofa
ENSHCOG00000011455	blm	89	51.020	ENSTGUG00000009959	-	77	51.409	Taeniopygia_guttata
ENSHCOG00000011455	blm	100	67.306	ENSTRUG00000019860	blm	76	67.273	Takifugu_rubripes
ENSHCOG00000011455	blm	99	68.538	ENSTNIG00000019246	blm	76	68.345	Tetraodon_nigroviridis
ENSHCOG00000011455	blm	53	57.170	ENSTBEG00000006706	BLM	56	57.170	Tupaia_belangeri
ENSHCOG00000011455	blm	83	61.538	ENSTTRG00000016386	BLM	74	54.719	Tursiops_truncatus
ENSHCOG00000011455	blm	99	53.839	ENSUMAG00000009105	BLM	95	67.131	Ursus_maritimus
ENSHCOG00000011455	blm	84	58.255	ENSVPAG00000000085	BLM	74	51.989	Vicugna_pacos
ENSHCOG00000011455	blm	83	60.588	ENSVVUG00000006402	BLM	72	56.414	Vulpes_vulpes
ENSHCOG00000011455	blm	89	61.943	ENSXETG00000007847	blm	61	61.943	Xenopus_tropicalis
ENSHCOG00000011455	blm	100	64.820	ENSXCOG00000020227	blm	73	65.247	Xiphophorus_couchianus
ENSHCOG00000011455	blm	100	67.085	ENSXMAG00000002951	blm	75	67.502	Xiphophorus_maculatus