EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000011543 (Gene tree)
Gene ID: 109518853
Gene Symbol: gtpbp4
Alias: GTP binding protein NGB|fi28d07|wu:fi28d07|zgc:55757
Full Name: GTP binding protein 4
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 7346 bases
Position: chrKV880057.1:1070857-1078202
Accession: 109518853
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000009124	NOG1	PF06858.14	5.2e-28	1	1
ENSHCOP00000023201	NOG1	PF06858.14	5.8e-28	1	1
ENSHCOP00000009124	MMR_HSR1	PF01926.23	3.8e-19	1	1
ENSHCOP00000023201	MMR_HSR1	PF01926.23	4e-19	1	1
ENSHCOP00000009124	NOGCT	PF08155.11	1.3e-20	1	1
ENSHCOP00000023201	NOGCT	PF08155.11	1.3e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000015191	-	2676	XM_019874961	ENSHCOP00000023201	635 (aa)	XP_019730520	UPI00094F3461
ENSHCOT00000025688	-	1818	-	ENSHCOP00000009124	605 (aa)	-	-

Gene Model

Click here to download ENSHCOG00000011543's gene model file

Pathways

Pathway ID	Pathway Name	Source
hcq03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000011543's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000011543	gtpbp4	100	82.520	ENSG00000107937	GTPBP4	100	95.714	Homo_sapiens
ENSHCOG00000011543	gtpbp4	100	89.921	ENSAPOG00000020433	gtpbp4	100	85.535	Acanthochromis_polyacanthus
ENSHCOG00000011543	gtpbp4	100	81.732	ENSAMEG00000001845	GTPBP4	100	81.732	Ailuropoda_melanoleuca
ENSHCOG00000011543	gtpbp4	100	88.926	ENSACIG00000018629	gtpbp4	100	88.926	Amphilophus_citrinellus
ENSHCOG00000011543	gtpbp4	100	90.236	ENSAOCG00000000427	gtpbp4	93	90.236	Amphiprion_ocellaris
ENSHCOG00000011543	gtpbp4	100	90.394	ENSAPEG00000002544	gtpbp4	100	90.394	Amphiprion_percula
ENSHCOG00000011543	gtpbp4	100	90.236	ENSATEG00000012635	gtpbp4	95	90.236	Anabas_testudineus
ENSHCOG00000011543	gtpbp4	52	72.892	ENSAPLG00000013790	-	100	72.892	Anas_platyrhynchos
ENSHCOG00000011543	gtpbp4	100	83.937	ENSACAG00000002943	GTPBP4	100	83.937	Anolis_carolinensis
ENSHCOG00000011543	gtpbp4	98	72.425	ENSANAG00000022188	-	99	72.900	Aotus_nancymaae
ENSHCOG00000011543	gtpbp4	88	79.710	ENSANAG00000029209	-	100	79.710	Aotus_nancymaae
ENSHCOG00000011543	gtpbp4	71	91.964	ENSACLG00000026330	gtpbp4	92	96.667	Astatotilapia_calliptera
ENSHCOG00000011543	gtpbp4	100	88.926	ENSAMXG00000019771	gtpbp4	100	88.926	Astyanax_mexicanus
ENSHCOG00000011543	gtpbp4	100	83.465	ENSBTAG00000014917	GTPBP4	100	83.465	Bos_taurus
ENSHCOG00000011543	gtpbp4	99	53.488	WBGene00020297	nog-1	99	53.488	Caenorhabditis_elegans
ENSHCOG00000011543	gtpbp4	100	82.732	ENSCJAG00000008494	-	100	82.889	Callithrix_jacchus
ENSHCOG00000011543	gtpbp4	100	81.947	ENSCJAG00000022962	-	100	82.104	Callithrix_jacchus
ENSHCOG00000011543	gtpbp4	93	81.803	ENSCAFG00000005536	GTPBP4	100	81.803	Canis_familiaris
ENSHCOG00000011543	gtpbp4	100	82.362	ENSCAFG00020004307	GTPBP4	100	82.362	Canis_lupus_dingo
ENSHCOG00000011543	gtpbp4	100	83.150	ENSCHIG00000018346	GTPBP4	100	83.150	Capra_hircus
ENSHCOG00000011543	gtpbp4	100	82.520	ENSTSYG00000004977	GTPBP4	100	82.520	Carlito_syrichta
ENSHCOG00000011543	gtpbp4	98	73.962	ENSCAPG00000002134	GTPBP4	97	73.962	Cavia_aperea
ENSHCOG00000011543	gtpbp4	100	82.520	ENSCPOG00000013736	GTPBP4	100	82.520	Cavia_porcellus
ENSHCOG00000011543	gtpbp4	99	82.724	ENSCCAG00000021627	-	92	83.056	Cebus_capucinus
ENSHCOG00000011543	gtpbp4	100	62.047	ENSCCAG00000030115	-	100	61.575	Cebus_capucinus
ENSHCOG00000011543	gtpbp4	100	83.306	ENSCATG00000004303	GTPBP4	100	83.306	Cercocebus_atys
ENSHCOG00000011543	gtpbp4	100	82.677	ENSCLAG00000011323	GTPBP4	100	82.677	Chinchilla_lanigera
ENSHCOG00000011543	gtpbp4	100	83.150	ENSCSAG00000014097	GTPBP4	100	83.150	Chlorocebus_sabaeus
ENSHCOG00000011543	gtpbp4	96	89.757	ENSCHOG00000012602	GTPBP4	88	89.757	Choloepus_hoffmanni
ENSHCOG00000011543	gtpbp4	100	83.780	ENSCPBG00000008398	GTPBP4	100	83.780	Chrysemys_picta_bellii
ENSHCOG00000011543	gtpbp4	100	63.594	ENSCING00000001957	-	100	64.969	Ciona_intestinalis
ENSHCOG00000011543	gtpbp4	100	64.625	ENSCSAVG00000009793	-	99	80.259	Ciona_savignyi
ENSHCOG00000011543	gtpbp4	100	79.467	ENSCANG00000014168	GTPBP4	100	79.467	Colobus_angolensis_palliatus
ENSHCOG00000011543	gtpbp4	100	83.622	ENSCGRG00001013765	Gtpbp4	100	83.622	Cricetulus_griseus_chok1gshd
ENSHCOG00000011543	gtpbp4	100	83.622	ENSCGRG00000012171	Gtpbp4	100	83.622	Cricetulus_griseus_crigri
ENSHCOG00000011543	gtpbp4	100	88.760	ENSCSEG00000007352	gtpbp4	100	88.760	Cynoglossus_semilaevis
ENSHCOG00000011543	gtpbp4	100	87.438	ENSCVAG00000008993	gtpbp4	100	87.438	Cyprinodon_variegatus
ENSHCOG00000011543	gtpbp4	100	85.984	ENSDARG00000018961	gtpbp4	100	85.984	Danio_rerio
ENSHCOG00000011543	gtpbp4	67	76.291	ENSDNOG00000006746	GTPBP4	100	76.291	Dasypus_novemcinctus
ENSHCOG00000011543	gtpbp4	83	94.286	ENSDORG00000010884	Gtpbp4	96	94.286	Dipodomys_ordii
ENSHCOG00000011543	gtpbp4	100	59.513	FBgn0028473	Non1	100	59.209	Drosophila_melanogaster
ENSHCOG00000011543	gtpbp4	74	81.132	ENSETEG00000016840	-	71	81.132	Echinops_telfairi
ENSHCOG00000011543	gtpbp4	98	65.662	ENSEBUG00000010311	gtpbp4	99	63.289	Eptatretus_burgeri
ENSHCOG00000011543	gtpbp4	100	82.205	ENSEASG00005019082	GTPBP4	100	82.205	Equus_asinus_asinus
ENSHCOG00000011543	gtpbp4	100	82.479	ENSECAG00000001700	GTPBP4	93	92.208	Equus_caballus
ENSHCOG00000011543	gtpbp4	100	87.601	ENSEEUG00000009889	GTPBP4	91	87.601	Erinaceus_europaeus
ENSHCOG00000011543	gtpbp4	100	86.499	ENSELUG00000008578	gtpbp4	100	85.831	Esox_lucius
ENSHCOG00000011543	gtpbp4	100	82.835	ENSFCAG00000026213	GTPBP4	100	82.835	Felis_catus
ENSHCOG00000011543	gtpbp4	99	79.937	ENSFALG00000006971	GTPBP4	87	82.677	Ficedula_albicollis
ENSHCOG00000011543	gtpbp4	100	82.677	ENSFDAG00000000998	GTPBP4	100	82.677	Fukomys_damarensis
ENSHCOG00000011543	gtpbp4	100	87.559	ENSFHEG00000012922	gtpbp4	100	87.559	Fundulus_heteroclitus
ENSHCOG00000011543	gtpbp4	100	84.409	ENSGMOG00000016090	gtpbp4	100	84.409	Gadus_morhua
ENSHCOG00000011543	gtpbp4	100	82.677	ENSGALG00000006703	GTPBP4	100	82.677	Gallus_gallus
ENSHCOG00000011543	gtpbp4	100	88.760	ENSGAFG00000002075	gtpbp4	100	88.760	Gambusia_affinis
ENSHCOG00000011543	gtpbp4	100	88.189	ENSGACG00000017481	gtpbp4	100	88.189	Gasterosteus_aculeatus
ENSHCOG00000011543	gtpbp4	93	82.823	ENSGAGG00000018689	GTPBP4	100	82.823	Gopherus_agassizii
ENSHCOG00000011543	gtpbp4	100	82.810	ENSGGOG00000013372	GTPBP4	100	82.810	Gorilla_gorilla
ENSHCOG00000011543	gtpbp4	100	89.764	ENSHBUG00000000192	gtpbp4	100	89.764	Haplochromis_burtoni
ENSHCOG00000011543	gtpbp4	100	82.362	ENSHGLG00000013071	GTPBP4	100	82.362	Heterocephalus_glaber_female
ENSHCOG00000011543	gtpbp4	100	76.101	ENSHGLG00100002964	-	100	76.101	Heterocephalus_glaber_male
ENSHCOG00000011543	gtpbp4	100	82.362	ENSHGLG00100017850	GTPBP4	100	82.362	Heterocephalus_glaber_male
ENSHCOG00000011543	gtpbp4	100	86.777	ENSIPUG00000014417	GTPBP4	100	86.777	Ictalurus_punctatus
ENSHCOG00000011543	gtpbp4	100	75.276	ENSSTOG00000023023	-	100	75.276	Ictidomys_tridecemlineatus
ENSHCOG00000011543	gtpbp4	100	83.307	ENSSTOG00000010042	-	100	83.307	Ictidomys_tridecemlineatus
ENSHCOG00000011543	gtpbp4	100	82.205	ENSJJAG00000010021	Gtpbp4	100	82.205	Jaculus_jaculus
ENSHCOG00000011543	gtpbp4	100	88.189	ENSKMAG00000021705	gtpbp4	100	88.189	Kryptolebias_marmoratus
ENSHCOG00000011543	gtpbp4	100	89.769	ENSLBEG00000021419	gtpbp4	100	89.769	Labrus_bergylta
ENSHCOG00000011543	gtpbp4	100	84.094	ENSLACG00000001449	GTPBP4	100	84.094	Latimeria_chalumnae
ENSHCOG00000011543	gtpbp4	100	84.946	ENSLOCG00000012279	gtpbp4	100	84.946	Lepisosteus_oculatus
ENSHCOG00000011543	gtpbp4	100	82.362	ENSLAFG00000018578	GTPBP4	100	82.362	Loxodonta_africana
ENSHCOG00000011543	gtpbp4	100	83.471	ENSMFAG00000046251	GTPBP4	100	83.471	Macaca_fascicularis
ENSHCOG00000011543	gtpbp4	100	80.331	ENSMMUG00000010813	GTPBP4	100	80.331	Macaca_mulatta
ENSHCOG00000011543	gtpbp4	100	83.306	ENSMNEG00000044366	GTPBP4	100	83.306	Macaca_nemestrina
ENSHCOG00000011543	gtpbp4	100	83.140	ENSMLEG00000039605	GTPBP4	100	83.140	Mandrillus_leucophaeus
ENSHCOG00000011543	gtpbp4	100	90.709	ENSMAMG00000013763	gtpbp4	92	90.709	Mastacembelus_armatus
ENSHCOG00000011543	gtpbp4	100	89.606	ENSMZEG00005006621	gtpbp4	100	89.606	Maylandia_zebra
ENSHCOG00000011543	gtpbp4	100	83.465	ENSMAUG00000000571	Gtpbp4	100	83.465	Mesocricetus_auratus
ENSHCOG00000011543	gtpbp4	100	82.149	ENSMICG00000013332	GTPBP4	100	82.149	Microcebus_murinus
ENSHCOG00000011543	gtpbp4	100	83.150	ENSMOCG00000002209	Gtpbp4	100	83.150	Microtus_ochrogaster
ENSHCOG00000011543	gtpbp4	100	90.248	ENSMMOG00000011257	gtpbp4	100	90.248	Mola_mola
ENSHCOG00000011543	gtpbp4	100	84.567	ENSMODG00000005978	GTPBP4	100	84.567	Monodelphis_domestica
ENSHCOG00000011543	gtpbp4	100	88.661	ENSMALG00000012488	gtpbp4	100	88.661	Monopterus_albus
ENSHCOG00000011543	gtpbp4	99	82.306	MGP_CAROLIEiJ_G0018215	Gtpbp4	100	82.306	Mus_caroli
ENSHCOG00000011543	gtpbp4	100	83.622	ENSMUSG00000021149	Gtpbp4	93	92.157	Mus_musculus
ENSHCOG00000011543	gtpbp4	100	83.465	MGP_PahariEiJ_G0019265	Gtpbp4	100	83.465	Mus_pahari
ENSHCOG00000011543	gtpbp4	99	83.412	MGP_SPRETEiJ_G0019073	Gtpbp4	100	83.412	Mus_spretus
ENSHCOG00000011543	gtpbp4	93	81.463	ENSMPUG00000016221	GTPBP4	100	81.463	Mustela_putorius_furo
ENSHCOG00000011543	gtpbp4	100	82.520	ENSMLUG00000028192	GTPBP4	100	82.520	Myotis_lucifugus
ENSHCOG00000011543	gtpbp4	100	83.150	ENSNGAG00000015364	Gtpbp4	100	83.150	Nannospalax_galili
ENSHCOG00000011543	gtpbp4	87	85.556	ENSNBRG00000019965	gtpbp4	86	85.556	Neolamprologus_brichardi
ENSHCOG00000011543	gtpbp4	100	82.975	ENSNLEG00000013495	GTPBP4	100	82.975	Nomascus_leucogenys
ENSHCOG00000011543	gtpbp4	64	81.818	ENSMEUG00000016215	-	67	84.375	Notamacropus_eugenii
ENSHCOG00000011543	gtpbp4	89	89.488	ENSOPRG00000008671	GTPBP4	86	89.488	Ochotona_princeps
ENSHCOG00000011543	gtpbp4	100	80.945	ENSODEG00000019152	-	100	80.945	Octodon_degus
ENSHCOG00000011543	gtpbp4	100	82.992	ENSODEG00000000962	-	100	82.992	Octodon_degus
ENSHCOG00000011543	gtpbp4	100	89.449	ENSONIG00000017707	gtpbp4	100	89.449	Oreochromis_niloticus
ENSHCOG00000011543	gtpbp4	99	81.517	ENSOANG00000006095	-	99	81.517	Ornithorhynchus_anatinus
ENSHCOG00000011543	gtpbp4	59	79.947	ENSOCUG00000014716	-	100	79.947	Oryctolagus_cuniculus
ENSHCOG00000011543	gtpbp4	100	81.102	ENSOCUG00000016120	-	100	81.102	Oryctolagus_cuniculus
ENSHCOG00000011543	gtpbp4	100	88.504	ENSORLG00000006151	gtpbp4	100	88.504	Oryzias_latipes
ENSHCOG00000011543	gtpbp4	100	88.504	ENSORLG00020020899	gtpbp4	100	88.504	Oryzias_latipes_hni
ENSHCOG00000011543	gtpbp4	100	88.346	ENSORLG00015020562	gtpbp4	100	88.346	Oryzias_latipes_hsok
ENSHCOG00000011543	gtpbp4	100	87.603	ENSOMEG00000019684	gtpbp4	100	87.603	Oryzias_melastigma
ENSHCOG00000011543	gtpbp4	100	82.362	ENSOGAG00000011941	GTPBP4	100	82.520	Otolemur_garnettii
ENSHCOG00000011543	gtpbp4	100	83.072	ENSOARG00000015047	GTPBP4	100	82.132	Ovis_aries
ENSHCOG00000011543	gtpbp4	100	82.975	ENSPPAG00000042066	GTPBP4	100	82.975	Pan_paniscus
ENSHCOG00000011543	gtpbp4	100	82.992	ENSPPRG00000009895	GTPBP4	100	82.992	Panthera_pardus
ENSHCOG00000011543	gtpbp4	100	83.150	ENSPTIG00000008569	GTPBP4	100	83.150	Panthera_tigris_altaica
ENSHCOG00000011543	gtpbp4	71	86.755	ENSPTRG00000002236	GTPBP4	86	87.472	Pan_troglodytes
ENSHCOG00000011543	gtpbp4	100	83.306	ENSPANG00000023543	GTPBP4	100	83.306	Papio_anubis
ENSHCOG00000011543	gtpbp4	100	86.929	ENSPKIG00000012301	gtpbp4	100	86.929	Paramormyrops_kingsleyae
ENSHCOG00000011543	gtpbp4	56	90.756	ENSPSIG00000005442	GTPBP4	93	90.756	Pelodiscus_sinensis
ENSHCOG00000011543	gtpbp4	100	83.307	ENSPMGG00000001462	gtpbp4	100	83.150	Periophthalmus_magnuspinnatus
ENSHCOG00000011543	gtpbp4	100	61.102	ENSPEMG00000012279	-	100	61.102	Peromyscus_maniculatus_bairdii
ENSHCOG00000011543	gtpbp4	100	83.150	ENSPEMG00000015091	-	100	83.150	Peromyscus_maniculatus_bairdii
ENSHCOG00000011543	gtpbp4	100	76.850	ENSPMAG00000000905	gtpbp4	100	76.850	Petromyzon_marinus
ENSHCOG00000011543	gtpbp4	100	83.937	ENSPCIG00000026082	GTPBP4	100	83.937	Phascolarctos_cinereus
ENSHCOG00000011543	gtpbp4	100	88.819	ENSPFOG00000000026	gtpbp4	100	88.819	Poecilia_formosa
ENSHCOG00000011543	gtpbp4	92	89.420	ENSPLAG00000002898	gtpbp4	97	89.708	Poecilia_latipinna
ENSHCOG00000011543	gtpbp4	100	88.760	ENSPMEG00000016422	gtpbp4	100	88.760	Poecilia_mexicana
ENSHCOG00000011543	gtpbp4	100	88.595	ENSPREG00000019870	gtpbp4	100	88.595	Poecilia_reticulata
ENSHCOG00000011543	gtpbp4	100	82.992	ENSPPYG00000002037	GTPBP4	100	82.992	Pongo_abelii
ENSHCOG00000011543	gtpbp4	97	77.760	ENSPCOG00000014602	-	100	77.597	Propithecus_coquereli
ENSHCOG00000011543	gtpbp4	100	77.165	ENSPCOG00000014382	-	100	77.165	Propithecus_coquereli
ENSHCOG00000011543	gtpbp4	91	91.319	ENSPVAG00000005882	GTPBP4	86	89.937	Pteropus_vampyrus
ENSHCOG00000011543	gtpbp4	100	83.140	ENSPNYG00000024251	gtpbp4	100	83.140	Pundamilia_nyererei
ENSHCOG00000011543	gtpbp4	100	87.934	ENSPNAG00000019977	gtpbp4	100	87.934	Pygocentrus_nattereri
ENSHCOG00000011543	gtpbp4	100	82.233	ENSRNOG00000016217	Gtpbp4	100	82.233	Rattus_norvegicus
ENSHCOG00000011543	gtpbp4	100	83.140	ENSRBIG00000028875	GTPBP4	100	83.140	Rhinopithecus_bieti
ENSHCOG00000011543	gtpbp4	100	83.140	ENSRROG00000030798	GTPBP4	100	83.140	Rhinopithecus_roxellana
ENSHCOG00000011543	gtpbp4	99	46.462	YPL093W	-	99	46.462	Saccharomyces_cerevisiae
ENSHCOG00000011543	gtpbp4	100	82.867	ENSSBOG00000028421	GTPBP4	100	82.867	Saimiri_boliviensis_boliviensis
ENSHCOG00000011543	gtpbp4	99	84.019	ENSSHAG00000014713	GTPBP4	95	84.019	Sarcophilus_harrisii
ENSHCOG00000011543	gtpbp4	100	86.777	ENSSFOG00015003167	gtpbp4	100	86.777	Scleropages_formosus
ENSHCOG00000011543	gtpbp4	100	89.449	ENSSMAG00000005863	gtpbp4	100	89.449	Scophthalmus_maximus
ENSHCOG00000011543	gtpbp4	100	91.074	ENSSDUG00000006534	gtpbp4	100	91.074	Seriola_dumerili
ENSHCOG00000011543	gtpbp4	100	90.909	ENSSLDG00000020688	gtpbp4	100	90.909	Seriola_lalandi_dorsalis
ENSHCOG00000011543	gtpbp4	64	98.020	ENSSARG00000003409	-	79	98.020	Sorex_araneus
ENSHCOG00000011543	gtpbp4	100	83.465	ENSSPUG00000002153	GTPBP4	100	83.465	Sphenodon_punctatus
ENSHCOG00000011543	gtpbp4	63	80.151	ENSSPAG00000014583	gtpbp4	100	80.151	Stegastes_partitus
ENSHCOG00000011543	gtpbp4	100	81.260	ENSSSCG00000028602	GTPBP4	100	81.260	Sus_scrofa
ENSHCOG00000011543	gtpbp4	99	79.491	ENSTGUG00000000820	GTPBP4	100	82.194	Taeniopygia_guttata
ENSHCOG00000011543	gtpbp4	100	88.430	ENSTRUG00000003900	gtpbp4	100	88.430	Takifugu_rubripes
ENSHCOG00000011543	gtpbp4	100	89.291	ENSTNIG00000007992	gtpbp4	100	89.291	Tetraodon_nigroviridis
ENSHCOG00000011543	gtpbp4	100	69.062	ENSTBEG00000003613	GTPBP4	100	69.062	Tupaia_belangeri
ENSHCOG00000011543	gtpbp4	100	77.067	ENSTTRG00000011163	GTPBP4	100	77.067	Tursiops_truncatus
ENSHCOG00000011543	gtpbp4	100	82.314	ENSUAMG00000013191	GTPBP4	100	82.314	Ursus_americanus
ENSHCOG00000011543	gtpbp4	93	81.122	ENSUMAG00000016138	GTPBP4	100	81.122	Ursus_maritimus
ENSHCOG00000011543	gtpbp4	100	82.205	ENSVVUG00000008608	GTPBP4	98	82.205	Vulpes_vulpes
ENSHCOG00000011543	gtpbp4	100	71.654	ENSXETG00000018097	gtpbp4	100	71.654	Xenopus_tropicalis
ENSHCOG00000011543	gtpbp4	100	81.633	ENSXCOG00000019953	gtpbp4	98	81.633	Xiphophorus_couchianus
ENSHCOG00000011543	gtpbp4	100	87.912	ENSXMAG00000006719	gtpbp4	100	87.912	Xiphophorus_maculatus