EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000011561 (Gene tree)
Gene ID: -
Gene Symbol: mrps28
Alias: zgc:152965
Full Name: mitochondrial ribosomal protein S28
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 935 bases
Position: chrKV880311.1:83432-84366
Accession: ZDB-GENE-061110-52
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000009169	MRP-S35	PF10246.9	7.1e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000015224	-	531	-	ENSHCOP00000009169	176 (aa)	-	-

Gene Model

Click here to download ENSHCOG00000011561's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000011561's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000011561	mrps28	73	54.545	ENSG00000147586	MRPS28	86	65.556	Homo_sapiens
ENSHCOG00000011561	mrps28	60	66.667	ENSAPOG00000007350	mrps28	69	79.012	Acanthochromis_polyacanthus
ENSHCOG00000011561	mrps28	53	63.830	ENSAMEG00000017516	MRPS28	81	63.830	Ailuropoda_melanoleuca
ENSHCOG00000011561	mrps28	76	65.672	ENSACIG00000007839	mrps28	95	58.333	Amphilophus_citrinellus
ENSHCOG00000011561	mrps28	76	68.657	ENSAOCG00000000705	mrps28	95	61.310	Amphiprion_ocellaris
ENSHCOG00000011561	mrps28	76	69.403	ENSAPEG00000016051	mrps28	95	61.905	Amphiprion_percula
ENSHCOG00000011561	mrps28	94	56.593	ENSATEG00000015295	mrps28	96	55.866	Anabas_testudineus
ENSHCOG00000011561	mrps28	55	62.887	ENSAPLG00000005666	MRPS28	90	62.887	Anas_platyrhynchos
ENSHCOG00000011561	mrps28	55	71.134	ENSACLG00000003892	mrps28	83	71.134	Astatotilapia_calliptera
ENSHCOG00000011561	mrps28	76	58.209	ENSAMXG00000026324	mrps28	70	56.716	Astyanax_mexicanus
ENSHCOG00000011561	mrps28	71	56.800	ENSBTAG00000001302	MRPS28	71	54.015	Bos_taurus
ENSHCOG00000011561	mrps28	63	42.727	WBGene00012830	mrps-28	59	45.631	Caenorhabditis_elegans
ENSHCOG00000011561	mrps28	76	52.985	ENSCAFG00000008393	MRPS28	72	52.985	Canis_familiaris
ENSHCOG00000011561	mrps28	76	52.985	ENSCAFG00020017987	MRPS28	72	52.985	Canis_lupus_dingo
ENSHCOG00000011561	mrps28	71	55.200	ENSCHIG00000018727	MRPS28	71	53.285	Capra_hircus
ENSHCOG00000011561	mrps28	76	48.120	ENSTSYG00000031343	-	69	47.015	Carlito_syrichta
ENSHCOG00000011561	mrps28	53	63.441	ENSCAPG00000006948	-	83	63.441	Cavia_aperea
ENSHCOG00000011561	mrps28	53	64.516	ENSCPOG00000031885	-	83	64.516	Cavia_porcellus
ENSHCOG00000011561	mrps28	55	61.856	ENSCCAG00000022534	MRPS28	66	64.198	Cebus_capucinus
ENSHCOG00000011561	mrps28	53	65.591	ENSCLAG00000003227	-	84	65.591	Chinchilla_lanigera
ENSHCOG00000011561	mrps28	73	55.469	ENSCHOG00000004885	MRPS28	72	51.429	Choloepus_hoffmanni
ENSHCOG00000011561	mrps28	72	59.524	ENSCGRG00001018741	Mrps28	65	59.524	Cricetulus_griseus_chok1gshd
ENSHCOG00000011561	mrps28	53	64.894	ENSCGRG00000018208	Mrps28	80	64.894	Cricetulus_griseus_crigri
ENSHCOG00000011561	mrps28	53	68.085	ENSCSEG00000020947	mrps28	88	68.085	Cynoglossus_semilaevis
ENSHCOG00000011561	mrps28	55	60.825	ENSCVAG00000007159	mrps28	78	60.825	Cyprinodon_variegatus
ENSHCOG00000011561	mrps28	77	58.088	ENSDARG00000041538	mrps28	74	58.088	Danio_rerio
ENSHCOG00000011561	mrps28	73	55.039	ENSDORG00000002762	Mrps28	71	51.449	Dipodomys_ordii
ENSHCOG00000011561	mrps28	73	45.736	FBgn0034361	mRpS28	51	52.000	Drosophila_melanogaster
ENSHCOG00000011561	mrps28	57	59.406	ENSEBUG00000010846	mrps28	76	50.365	Eptatretus_burgeri
ENSHCOG00000011561	mrps28	76	54.015	ENSEASG00005020574	MRPS28	71	54.745	Equus_asinus_asinus
ENSHCOG00000011561	mrps28	55	47.000	ENSECAG00000030797	-	60	48.000	Equus_caballus
ENSHCOG00000011561	mrps28	76	54.015	ENSECAG00000015430	MRPS28	71	54.745	Equus_caballus
ENSHCOG00000011561	mrps28	55	45.455	ENSECAG00000036837	-	57	46.465	Equus_caballus
ENSHCOG00000011561	mrps28	76	55.639	ENSFCAG00000032510	MRPS28	75	53.793	Felis_catus
ENSHCOG00000011561	mrps28	65	58.261	ENSFALG00000008608	MRPS28	73	64.286	Ficedula_albicollis
ENSHCOG00000011561	mrps28	73	57.812	ENSFDAG00000013634	MRPS28	71	53.901	Fukomys_damarensis
ENSHCOG00000011561	mrps28	61	59.813	ENSFHEG00000006233	mrps28	79	59.813	Fundulus_heteroclitus
ENSHCOG00000011561	mrps28	68	57.851	ENSGAFG00000014759	mrps28	76	55.102	Gambusia_affinis
ENSHCOG00000011561	mrps28	76	67.910	ENSGACG00000019939	mrps28	71	67.910	Gasterosteus_aculeatus
ENSHCOG00000011561	mrps28	64	58.929	ENSGAGG00000025904	MRPS28	56	64.948	Gopherus_agassizii
ENSHCOG00000011561	mrps28	55	71.875	ENSHBUG00000014315	mrps28	81	71.875	Haplochromis_burtoni
ENSHCOG00000011561	mrps28	78	54.286	ENSHGLG00000009986	MRPS28	59	53.191	Heterocephalus_glaber_female
ENSHCOG00000011561	mrps28	78	54.286	ENSHGLG00100019258	MRPS28	59	53.191	Heterocephalus_glaber_male
ENSHCOG00000011561	mrps28	94	48.619	ENSIPUG00000012566	mrps28	96	48.619	Ictalurus_punctatus
ENSHCOG00000011561	mrps28	51	47.312	ENSSTOG00000015179	MRPS28	71	46.939	Ictidomys_tridecemlineatus
ENSHCOG00000011561	mrps28	81	60.000	ENSKMAG00000006636	mrps28	77	60.000	Kryptolebias_marmoratus
ENSHCOG00000011561	mrps28	81	57.343	ENSLACG00000014702	MRPS28	73	57.343	Latimeria_chalumnae
ENSHCOG00000011561	mrps28	78	62.774	ENSLOCG00000017359	mrps28	70	62.774	Lepisosteus_oculatus
ENSHCOG00000011561	mrps28	55	71.875	ENSMAMG00000017782	mrps28	82	71.875	Mastacembelus_armatus
ENSHCOG00000011561	mrps28	55	71.134	ENSMZEG00005014997	mrps28	83	71.134	Maylandia_zebra
ENSHCOG00000011561	mrps28	55	71.134	ENSMZEG00005010529	-	83	71.134	Maylandia_zebra
ENSHCOG00000011561	mrps28	55	64.948	ENSMGAG00000011622	MRPS28	92	64.948	Meleagris_gallopavo
ENSHCOG00000011561	mrps28	71	58.400	ENSMAUG00000009465	Mrps28	50	67.021	Mesocricetus_auratus
ENSHCOG00000011561	mrps28	75	54.074	ENSMICG00000044873	MRPS28	72	52.857	Microcebus_murinus
ENSHCOG00000011561	mrps28	71	58.400	ENSMOCG00000021930	Mrps28	65	57.143	Microtus_ochrogaster
ENSHCOG00000011561	mrps28	73	56.250	ENSMODG00000006621	MRPS28	66	53.383	Monodelphis_domestica
ENSHCOG00000011561	mrps28	60	66.038	ENSMALG00000006494	mrps28	75	68.000	Monopterus_albus
ENSHCOG00000011561	mrps28	71	56.800	MGP_CAROLIEiJ_G0024833	Mrps28	65	55.556	Mus_caroli
ENSHCOG00000011561	mrps28	71	56.000	ENSMUSG00000040269	Mrps28	65	54.762	Mus_musculus
ENSHCOG00000011561	mrps28	71	56.000	MGP_PahariEiJ_G0026281	Mrps28	65	55.200	Mus_pahari
ENSHCOG00000011561	mrps28	71	56.000	MGP_SPRETEiJ_G0025763	Mrps28	65	54.762	Mus_spretus
ENSHCOG00000011561	mrps28	72	55.118	ENSMPUG00000001853	MRPS28	72	54.015	Mustela_putorius_furo
ENSHCOG00000011561	mrps28	76	55.639	ENSMLUG00000015175	MRPS28	70	55.970	Myotis_lucifugus
ENSHCOG00000011561	mrps28	73	57.031	ENSNGAG00000000216	Mrps28	52	65.979	Nannospalax_galili
ENSHCOG00000011561	mrps28	94	56.140	ENSNBRG00000021393	mrps28	95	55.233	Neolamprologus_brichardi
ENSHCOG00000011561	mrps28	93	47.429	ENSMEUG00000007676	MRPS28	93	46.286	Notamacropus_eugenii
ENSHCOG00000011561	mrps28	77	57.554	ENSODEG00000005701	MRPS28	72	55.396	Octodon_degus
ENSHCOG00000011561	mrps28	74	65.414	ENSONIG00000020758	mrps28	84	59.060	Oreochromis_niloticus
ENSHCOG00000011561	mrps28	73	58.594	ENSOCUG00000000867	MRPS28	70	57.364	Oryctolagus_cuniculus
ENSHCOG00000011561	mrps28	76	64.493	ENSORLG00000026843	mrps28	76	62.044	Oryzias_latipes
ENSHCOG00000011561	mrps28	76	63.971	ENSORLG00020022089	mrps28	76	62.774	Oryzias_latipes_hni
ENSHCOG00000011561	mrps28	77	61.871	ENSOMEG00000008250	mrps28	78	61.871	Oryzias_melastigma
ENSHCOG00000011561	mrps28	73	56.250	ENSOGAG00000016599	MRPS28	73	51.773	Otolemur_garnettii
ENSHCOG00000011561	mrps28	76	55.639	ENSPPRG00000009220	MRPS28	75	53.793	Panthera_pardus
ENSHCOG00000011561	mrps28	76	56.391	ENSPTIG00000019934	MRPS28	75	54.483	Panthera_tigris_altaica
ENSHCOG00000011561	mrps28	67	57.983	ENSPKIG00000022304	mrps28	78	66.327	Paramormyrops_kingsleyae
ENSHCOG00000011561	mrps28	75	56.061	ENSPMGG00000008007	-	72	56.061	Periophthalmus_magnuspinnatus
ENSHCOG00000011561	mrps28	75	56.818	ENSPEMG00000012338	Mrps28	68	55.639	Peromyscus_maniculatus_bairdii
ENSHCOG00000011561	mrps28	55	63.918	ENSPMAG00000002015	mrps28	86	63.918	Petromyzon_marinus
ENSHCOG00000011561	mrps28	75	55.303	ENSPCIG00000026795	MRPS28	69	52.555	Phascolarctos_cinereus
ENSHCOG00000011561	mrps28	69	57.377	ENSPFOG00000020828	mrps28	94	50.888	Poecilia_formosa
ENSHCOG00000011561	mrps28	69	57.377	ENSPLAG00000005387	mrps28	94	50.888	Poecilia_latipinna
ENSHCOG00000011561	mrps28	66	57.627	ENSPMEG00000022332	mrps28	96	50.909	Poecilia_mexicana
ENSHCOG00000011561	mrps28	78	56.835	ENSPREG00000005690	mrps28	77	56.835	Poecilia_reticulata
ENSHCOG00000011561	mrps28	73	56.818	ENSPPYG00000018694	MRPS28	70	55.474	Pongo_abelii
ENSHCOG00000011561	mrps28	56	60.606	ENSPCAG00000000404	MRPS28	84	60.606	Procavia_capensis
ENSHCOG00000011561	mrps28	75	53.333	ENSPCOG00000003866	MRPS28	72	52.143	Propithecus_coquereli
ENSHCOG00000011561	mrps28	71	55.200	ENSPVAG00000007815	MRPS28	71	51.825	Pteropus_vampyrus
ENSHCOG00000011561	mrps28	55	71.134	ENSPNYG00000016499	mrps28	83	71.134	Pundamilia_nyererei
ENSHCOG00000011561	mrps28	74	58.696	ENSPNAG00000018621	mrps28	74	56.522	Pygocentrus_nattereri
ENSHCOG00000011561	mrps28	71	57.600	ENSRNOG00000032630	Mrps28	64	56.349	Rattus_norvegicus
ENSHCOG00000011561	mrps28	75	53.333	ENSSBOG00000028198	MRPS28	70	63.953	Saimiri_boliviensis_boliviensis
ENSHCOG00000011561	mrps28	76	58.451	ENSSFOG00015004723	mrps28	70	55.405	Scleropages_formosus
ENSHCOG00000011561	mrps28	76	68.889	ENSSMAG00000021042	mrps28	77	65.926	Scophthalmus_maximus
ENSHCOG00000011561	mrps28	77	63.768	ENSSDUG00000021722	mrps28	76	63.043	Seriola_dumerili
ENSHCOG00000011561	mrps28	65	47.581	ENSSLDG00000003091	-	93	47.200	Seriola_lalandi_dorsalis
ENSHCOG00000011561	mrps28	93	54.335	ENSSLDG00000013261	mrps28	95	53.672	Seriola_lalandi_dorsalis
ENSHCOG00000011561	mrps28	71	57.600	ENSSARG00000007429	MRPS28	69	54.815	Sorex_araneus
ENSHCOG00000011561	mrps28	55	60.825	ENSSPUG00000017502	MRPS28	57	60.825	Sphenodon_punctatus
ENSHCOG00000011561	mrps28	76	67.910	ENSSPAG00000003194	mrps28	79	67.391	Stegastes_partitus
ENSHCOG00000011561	mrps28	71	54.400	ENSSSCG00000037782	MRPS28	71	53.285	Sus_scrofa
ENSHCOG00000011561	mrps28	95	53.107	ENSTRUG00000012758	mrps28	96	53.107	Takifugu_rubripes
ENSHCOG00000011561	mrps28	76	51.128	ENSTBEG00000010380	MRPS28	73	49.655	Tupaia_belangeri
ENSHCOG00000011561	mrps28	71	52.000	ENSTTRG00000000087	MRPS28	70	49.635	Tursiops_truncatus
ENSHCOG00000011561	mrps28	72	53.543	ENSUAMG00000018127	MRPS28	72	53.285	Ursus_americanus
ENSHCOG00000011561	mrps28	72	53.543	ENSUMAG00000014927	MRPS28	72	53.285	Ursus_maritimus
ENSHCOG00000011561	mrps28	76	53.285	ENSVPAG00000000652	MRPS28	70	51.825	Vicugna_pacos
ENSHCOG00000011561	mrps28	76	55.970	ENSVVUG00000000384	MRPS28	72	55.970	Vulpes_vulpes
ENSHCOG00000011561	mrps28	93	51.515	ENSXCOG00000015251	mrps28	85	51.515	Xiphophorus_couchianus
ENSHCOG00000011561	mrps28	51	65.934	ENSXMAG00000008774	mrps28	52	65.934	Xiphophorus_maculatus