EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000011581 (Gene tree)
Gene ID: -
Gene Symbol: LARP4B
Alias: KIAA0217|LARP5
Full Name: La ribonucleoprotein domain family member 4B
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 12080 bases
Position: chrKV880057.1:1054318-1066397
Accession: 109518826
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000009174	La	PF05383.17	1.1e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000015220	LARP4B-201	2145	XM_019874914	ENSHCOP00000009174	714 (aa)	XP_019730473	-

Gene Model

Click here to download ENSHCOG00000011581's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000011581's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000011581	LARP4B	61	43.400	ENSHCOG00000020857	larp4ab	53	44.417
ENSHCOG00000011581	LARP4B	60	44.368	ENSHCOG00000015951	larp4aa	52	44.622

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000011581	LARP4B	89	54.319	ENSG00000107929	LARP4B	99	54.058	Homo_sapiens
ENSHCOG00000011581	LARP4B	89	70.613	ENSAPOG00000020531	LARP4B	99	72.350	Acanthochromis_polyacanthus
ENSHCOG00000011581	LARP4B	80	54.314	ENSAMEG00000001810	LARP4B	99	52.987	Ailuropoda_melanoleuca
ENSHCOG00000011581	LARP4B	89	65.339	ENSAOCG00000007887	-	77	91.837	Amphiprion_ocellaris
ENSHCOG00000011581	LARP4B	82	71.235	ENSAPEG00000002512	LARP4B	79	70.227	Amphiprion_percula
ENSHCOG00000011581	LARP4B	83	69.091	ENSATEG00000012614	LARP4B	84	69.091	Anabas_testudineus
ENSHCOG00000011581	LARP4B	84	60.092	ENSAPLG00000003813	LARP4B	81	59.846	Anas_platyrhynchos
ENSHCOG00000011581	LARP4B	89	60.759	ENSACAG00000002858	LARP4B	96	60.759	Anolis_carolinensis
ENSHCOG00000011581	LARP4B	89	54.450	ENSANAG00000007531	-	99	54.188	Aotus_nancymaae
ENSHCOG00000011581	LARP4B	89	75.723	ENSACLG00000026356	LARP4B	99	75.723	Astatotilapia_calliptera
ENSHCOG00000011581	LARP4B	81	58.730	ENSAMXG00000003335	larp4b	86	58.730	Astyanax_mexicanus
ENSHCOG00000011581	LARP4B	86	57.424	ENSBTAG00000013899	LARP4B	88	56.991	Bos_taurus
ENSHCOG00000011581	LARP4B	89	55.177	ENSCJAG00000018434	LARP4B	99	54.915	Callithrix_jacchus
ENSHCOG00000011581	LARP4B	81	55.134	ENSCAFG00020004209	LARP4B	85	57.424	Canis_lupus_dingo
ENSHCOG00000011581	LARP4B	86	53.949	ENSCHIG00000013543	LARP4B	98	53.681	Capra_hircus
ENSHCOG00000011581	LARP4B	80	60.645	ENSTSYG00000002568	LARP4B	99	60.616	Carlito_syrichta
ENSHCOG00000011581	LARP4B	88	54.046	ENSCAPG00000009725	LARP4B	77	63.972	Cavia_aperea
ENSHCOG00000011581	LARP4B	89	54.068	ENSCPOG00000009375	LARP4B	99	53.543	Cavia_porcellus
ENSHCOG00000011581	LARP4B	89	54.199	ENSCCAG00000024869	LARP4B	99	53.937	Cebus_capucinus
ENSHCOG00000011581	LARP4B	89	54.581	ENSCATG00000019750	LARP4B	99	54.319	Cercocebus_atys
ENSHCOG00000011581	LARP4B	89	55.034	ENSCLAG00000011570	LARP4B	99	54.765	Chinchilla_lanigera
ENSHCOG00000011581	LARP4B	62	75.758	ENSCHOG00000007831	-	58	75.758	Choloepus_hoffmanni
ENSHCOG00000011581	LARP4B	89	55.378	ENSCPBG00000017063	LARP4B	85	59.815	Chrysemys_picta_bellii
ENSHCOG00000011581	LARP4B	89	52.618	ENSCANG00000038021	LARP4B	99	52.356	Colobus_angolensis_palliatus
ENSHCOG00000011581	LARP4B	89	53.867	ENSCGRG00001022930	Larp4b	99	60.775	Cricetulus_griseus_chok1gshd
ENSHCOG00000011581	LARP4B	89	53.867	ENSCGRG00000006022	Larp4b	99	60.775	Cricetulus_griseus_crigri
ENSHCOG00000011581	LARP4B	89	71.810	ENSCSEG00000007342	LARP4B	99	71.810	Cynoglossus_semilaevis
ENSHCOG00000011581	LARP4B	89	69.391	ENSCVAG00000008910	LARP4B	99	69.391	Cyprinodon_variegatus
ENSHCOG00000011581	LARP4B	81	68.750	ENSDARG00000062146	larp4b	85	68.750	Danio_rerio
ENSHCOG00000011581	LARP4B	85	53.398	ENSDNOG00000045543	-	100	59.369	Dasypus_novemcinctus
ENSHCOG00000011581	LARP4B	89	50.897	ENSDORG00000009328	Larp4b	99	57.349	Dipodomys_ordii
ENSHCOG00000011581	LARP4B	74	60.993	ENSETEG00000011249	LARP4B	79	60.993	Echinops_telfairi
ENSHCOG00000011581	LARP4B	80	55.714	ENSEASG00005019068	-	99	54.079	Equus_asinus_asinus
ENSHCOG00000011581	LARP4B	80	55.857	ENSECAG00000024040	LARP4B	99	54.342	Equus_caballus
ENSHCOG00000011581	LARP4B	72	61.239	ENSEEUG00000008391	LARP4B	78	58.776	Erinaceus_europaeus
ENSHCOG00000011581	LARP4B	76	41.440	ENSELUG00000001417	-	94	41.452	Esox_lucius
ENSHCOG00000011581	LARP4B	89	73.016	ENSELUG00000008626	LARP4B	81	63.354	Esox_lucius
ENSHCOG00000011581	LARP4B	84	54.110	ENSFCAG00000000721	-	99	53.325	Felis_catus
ENSHCOG00000011581	LARP4B	89	60.256	ENSFALG00000006961	LARP4B	96	60.256	Ficedula_albicollis
ENSHCOG00000011581	LARP4B	89	53.595	ENSFDAG00000006158	LARP4B	96	53.604	Fukomys_damarensis
ENSHCOG00000011581	LARP4B	89	60.651	ENSFHEG00000013037	LARP4B	99	60.459	Fundulus_heteroclitus
ENSHCOG00000011581	LARP4B	65	75.263	ENSGMOG00000010818	-	90	75.263	Gadus_morhua
ENSHCOG00000011581	LARP4B	89	54.497	ENSGALG00000006672	LARP4B	99	54.233	Gallus_gallus
ENSHCOG00000011581	LARP4B	89	62.580	ENSGACG00000017535	LARP4B	98	62.580	Gasterosteus_aculeatus
ENSHCOG00000011581	LARP4B	84	59.815	ENSGAGG00000008598	LARP4B	90	59.505	Gopherus_agassizii
ENSHCOG00000011581	LARP4B	89	54.188	ENSGGOG00000003572	LARP4B	99	53.927	Gorilla_gorilla
ENSHCOG00000011581	LARP4B	89	72.199	ENSHBUG00000007535	LARP4B	99	72.199	Haplochromis_burtoni
ENSHCOG00000011581	LARP4B	89	54.545	ENSHGLG00000012936	LARP4B	99	62.019	Heterocephalus_glaber_female
ENSHCOG00000011581	LARP4B	89	53.665	ENSHGLG00100016220	-	99	53.796	Heterocephalus_glaber_male
ENSHCOG00000011581	LARP4B	75	50.000	ENSHGLG00100017261	-	100	49.676	Heterocephalus_glaber_male
ENSHCOG00000011581	LARP4B	78	58.523	ENSIPUG00000009705	larp4b	83	57.895	Ictalurus_punctatus
ENSHCOG00000011581	LARP4B	89	55.214	ENSSTOG00000000587	LARP4B	99	61.836	Ictidomys_tridecemlineatus
ENSHCOG00000011581	LARP4B	89	54.047	ENSJJAG00000020847	Larp4b	99	53.786	Jaculus_jaculus
ENSHCOG00000011581	LARP4B	88	91.071	ENSKMAG00000021674	LARP4B	96	72.038	Kryptolebias_marmoratus
ENSHCOG00000011581	LARP4B	69	83.908	ENSLBEG00000025293	-	70	83.908	Labrus_bergylta
ENSHCOG00000011581	LARP4B	82	58.599	ENSLACG00000009492	LARP4B	87	58.413	Latimeria_chalumnae
ENSHCOG00000011581	LARP4B	79	62.114	ENSLOCG00000012290	larp4b	85	62.885	Lepisosteus_oculatus
ENSHCOG00000011581	LARP4B	89	53.186	ENSLAFG00000015334	LARP4B	88	57.722	Loxodonta_africana
ENSHCOG00000011581	LARP4B	89	54.581	ENSMFAG00000001766	LARP4B	99	52.356	Macaca_fascicularis
ENSHCOG00000011581	LARP4B	89	54.581	ENSMMUG00000005279	LARP4B	99	54.319	Macaca_mulatta
ENSHCOG00000011581	LARP4B	89	54.450	ENSMNEG00000014019	LARP4B	99	52.225	Macaca_nemestrina
ENSHCOG00000011581	LARP4B	89	54.759	ENSMLEG00000035198	LARP4B	99	54.498	Mandrillus_leucophaeus
ENSHCOG00000011581	LARP4B	89	71.385	ENSMAMG00000013742	LARP4B	92	71.385	Mastacembelus_armatus
ENSHCOG00000011581	LARP4B	80	72.826	ENSMZEG00005014594	-	87	72.826	Maylandia_zebra
ENSHCOG00000011581	LARP4B	89	73.343	ENSMZEG00005006498	-	99	73.343	Maylandia_zebra
ENSHCOG00000011581	LARP4B	82	60.285	ENSMGAG00000005472	LARP4B	78	61.639	Meleagris_gallopavo
ENSHCOG00000011581	LARP4B	89	53.719	ENSMAUG00000021657	Larp4b	99	53.306	Mesocricetus_auratus
ENSHCOG00000011581	LARP4B	89	55.798	ENSMICG00000001301	LARP4B	99	55.978	Microcebus_murinus
ENSHCOG00000011581	LARP4B	89	53.719	ENSMOCG00000021452	Larp4b	95	57.464	Microtus_ochrogaster
ENSHCOG00000011581	LARP4B	89	69.679	ENSMMOG00000011253	-	99	69.941	Mola_mola
ENSHCOG00000011581	LARP4B	89	54.365	ENSMODG00000005957	LARP4B	99	54.630	Monodelphis_domestica
ENSHCOG00000011581	LARP4B	89	63.783	ENSMALG00000012432	LARP4B	99	64.809	Monopterus_albus
ENSHCOG00000011581	LARP4B	89	53.591	MGP_CAROLIEiJ_G0018216	Larp4b	99	61.594	Mus_caroli
ENSHCOG00000011581	LARP4B	89	53.719	ENSMUSG00000033499	Larp4b	99	61.298	Mus_musculus
ENSHCOG00000011581	LARP4B	89	54.420	MGP_PahariEiJ_G0019266	Larp4b	86	56.818	Mus_pahari
ENSHCOG00000011581	LARP4B	89	53.719	MGP_SPRETEiJ_G0019074	Larp4b	99	61.298	Mus_spretus
ENSHCOG00000011581	LARP4B	81	54.866	ENSMPUG00000016220	LARP4B	97	54.047	Mustela_putorius_furo
ENSHCOG00000011581	LARP4B	76	55.641	ENSMLUG00000005880	LARP4B	99	53.390	Myotis_lucifugus
ENSHCOG00000011581	LARP4B	89	53.604	ENSNGAG00000001750	Larp4b	99	53.473	Nannospalax_galili
ENSHCOG00000011581	LARP4B	89	65.318	ENSNBRG00000020018	LARP4B	99	65.318	Neolamprologus_brichardi
ENSHCOG00000011581	LARP4B	89	54.319	ENSNLEG00000013442	LARP4B	99	54.319	Nomascus_leucogenys
ENSHCOG00000011581	LARP4B	71	43.112	ENSMEUG00000013114	-	83	43.909	Notamacropus_eugenii
ENSHCOG00000011581	LARP4B	89	50.648	ENSOPRG00000003300	LARP4B	99	50.648	Ochotona_princeps
ENSHCOG00000011581	LARP4B	89	50.691	ENSODEG00000001109	LARP4B	99	55.797	Octodon_degus
ENSHCOG00000011581	LARP4B	80	74.641	ENSONIG00000017705	LARP4B	80	74.641	Oreochromis_niloticus
ENSHCOG00000011581	LARP4B	81	58.121	ENSOANG00000006100	LARP4B	80	58.121	Ornithorhynchus_anatinus
ENSHCOG00000011581	LARP4B	89	51.519	ENSOCUG00000004950	LARP4B	97	51.584	Oryctolagus_cuniculus
ENSHCOG00000011581	LARP4B	82	68.252	ENSORLG00000006080	LARP4B	82	68.673	Oryzias_latipes
ENSHCOG00000011581	LARP4B	89	68.603	ENSORLG00020020940	LARP4B	99	68.603	Oryzias_latipes_hni
ENSHCOG00000011581	LARP4B	89	68.793	ENSORLG00015020608	LARP4B	99	68.793	Oryzias_latipes_hsok
ENSHCOG00000011581	LARP4B	88	89.286	ENSOMEG00000019619	LARP4B	90	89.286	Oryzias_melastigma
ENSHCOG00000011581	LARP4B	80	58.966	ENSOGAG00000011540	LARP4B	85	58.929	Otolemur_garnettii
ENSHCOG00000011581	LARP4B	89	53.003	ENSOARG00000015320	LARP4B	98	52.742	Ovis_aries
ENSHCOG00000011581	LARP4B	89	54.319	ENSPPAG00000039232	LARP4B	99	54.319	Pan_paniscus
ENSHCOG00000011581	LARP4B	84	53.984	ENSPPRG00000009489	LARP4B	99	53.464	Panthera_pardus
ENSHCOG00000011581	LARP4B	84	53.984	ENSPTIG00000008543	LARP4B	99	53.464	Panthera_tigris_altaica
ENSHCOG00000011581	LARP4B	86	58.485	ENSPTRG00000002235	LARP4B	99	54.319	Pan_troglodytes
ENSHCOG00000011581	LARP4B	89	54.581	ENSPANG00000023546	LARP4B	99	52.356	Papio_anubis
ENSHCOG00000011581	LARP4B	80	59.265	ENSPKIG00000012368	LARP4B	80	59.615	Paramormyrops_kingsleyae
ENSHCOG00000011581	LARP4B	61	81.967	ENSPSIG00000005600	LARP4B	81	83.613	Pelodiscus_sinensis
ENSHCOG00000011581	LARP4B	80	63.736	ENSPMGG00000008261	LARP4B	87	63.736	Periophthalmus_magnuspinnatus
ENSHCOG00000011581	LARP4B	89	53.403	ENSPEMG00000014052	Larp4b	86	57.337	Peromyscus_maniculatus_bairdii
ENSHCOG00000011581	LARP4B	81	79.287	ENSPFOG00000000029	LARP4B	91	91.071	Poecilia_formosa
ENSHCOG00000011581	LARP4B	89	71.146	ENSPLAG00000002871	LARP4B	91	91.071	Poecilia_latipinna
ENSHCOG00000011581	LARP4B	87	77.692	ENSPMEG00000016361	LARP4B	91	91.071	Poecilia_mexicana
ENSHCOG00000011581	LARP4B	89	58.036	ENSPPYG00000002035	LARP4B	95	57.738	Pongo_abelii
ENSHCOG00000011581	LARP4B	89	54.617	ENSPCOG00000014688	LARP4B	99	54.354	Propithecus_coquereli
ENSHCOG00000011581	LARP4B	80	54.560	ENSPVAG00000009784	LARP4B	83	54.400	Pteropus_vampyrus
ENSHCOG00000011581	LARP4B	89	72.476	ENSPNYG00000024252	LARP4B	99	72.476	Pundamilia_nyererei
ENSHCOG00000011581	LARP4B	80	56.814	ENSPNAG00000028956	larp4b	85	56.637	Pygocentrus_nattereri
ENSHCOG00000011581	LARP4B	89	53.866	ENSRNOG00000015888	Larp4b	100	53.604	Rattus_norvegicus
ENSHCOG00000011581	LARP4B	89	54.319	ENSRBIG00000033294	LARP4B	99	54.058	Rhinopithecus_bieti
ENSHCOG00000011581	LARP4B	89	54.319	ENSRROG00000033879	LARP4B	99	54.188	Rhinopithecus_roxellana
ENSHCOG00000011581	LARP4B	89	50.065	ENSSBOG00000021109	LARP4B	99	49.804	Saimiri_boliviensis_boliviensis
ENSHCOG00000011581	LARP4B	89	55.228	ENSSHAG00000013392	LARP4B	99	55.496	Sarcophilus_harrisii
ENSHCOG00000011581	LARP4B	82	77.358	ENSSFOG00015003256	LARP4B	88	77.358	Scleropages_formosus
ENSHCOG00000011581	LARP4B	89	70.925	ENSSMAG00000005982	-	99	70.925	Scophthalmus_maximus
ENSHCOG00000011581	LARP4B	89	71.939	ENSSDUG00000006704	LARP4B	99	72.490	Seriola_dumerili
ENSHCOG00000011581	LARP4B	89	75.224	ENSSLDG00000020660	LARP4B	99	75.224	Seriola_lalandi_dorsalis
ENSHCOG00000011581	LARP4B	62	87.379	ENSSARG00000001243	-	78	87.379	Sorex_araneus
ENSHCOG00000011581	LARP4B	89	59.178	ENSSPUG00000013734	-	99	58.884	Sphenodon_punctatus
ENSHCOG00000011581	LARP4B	89	59.971	ENSSPUG00000002102	-	99	59.684	Sphenodon_punctatus
ENSHCOG00000011581	LARP4B	89	74.586	ENSSPAG00000014628	LARP4B	99	74.586	Stegastes_partitus
ENSHCOG00000011581	LARP4B	89	54.522	ENSSSCG00000011162	LARP4B	94	59.520	Sus_scrofa
ENSHCOG00000011581	LARP4B	85	59.480	ENSTGUG00000000811	-	86	59.480	Taeniopygia_guttata
ENSHCOG00000011581	LARP4B	67	67.140	ENSTNIG00000004571	-	80	71.246	Tetraodon_nigroviridis
ENSHCOG00000011581	LARP4B	67	78.910	ENSTNIG00000007991	LARP4B	81	68.770	Tetraodon_nigroviridis
ENSHCOG00000011581	LARP4B	68	61.429	ENSTTRG00000011151	LARP4B	82	59.369	Tursiops_truncatus
ENSHCOG00000011581	LARP4B	74	54.917	ENSUAMG00000016461	LARP4B	95	54.614	Ursus_americanus
ENSHCOG00000011581	LARP4B	81	54.635	ENSUMAG00000016127	LARP4B	99	53.377	Ursus_maritimus
ENSHCOG00000011581	LARP4B	81	55.134	ENSVVUG00000008641	LARP4B	99	61.205	Vulpes_vulpes
ENSHCOG00000011581	LARP4B	86	60.256	ENSXETG00000016882	larp4b	90	60.256	Xenopus_tropicalis
ENSHCOG00000011581	LARP4B	89	63.058	ENSXCOG00000019952	LARP4B	99	63.058	Xiphophorus_couchianus
ENSHCOG00000011581	LARP4B	89	68.603	ENSXMAG00000021533	LARP4B	99	68.603	Xiphophorus_maculatus