EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000011588 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 9757 bases
Position: chrKV880103.1:23641-33397
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000023259	RVT_1	PF00078.27	1.7e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000015266	-	618	-	ENSHCOP00000023259	205 (aa)	-	-

Gene Model

Click here to download ENSHCOG00000011588's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000011588's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000011588	-	90	96.757	ENSHCOG00000017691	-	90	96.757
ENSHCOG00000011588	-	78	56.250	ENSHCOG00000006864	-	75	56.250
ENSHCOG00000011588	-	81	56.805	ENSHCOG00000000129	-	83	56.805
ENSHCOG00000011588	-	66	100.000	ENSHCOG00000015689	-	57	100.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000011588	-	87	56.425	ENSEBUG00000004867	-	65	56.425	Eptatretus_burgeri
ENSHCOG00000011588	-	87	31.285	ENSMZEG00005022588	-	52	31.285	Maylandia_zebra
ENSHCOG00000011588	-	87	30.556	ENSMALG00000012850	-	52	30.556	Monopterus_albus
ENSHCOG00000011588	-	67	30.201	ENSORLG00020022651	-	73	30.201	Oryzias_latipes_hni
ENSHCOG00000011588	-	90	30.811	ENSPKIG00000018770	-	77	30.811	Paramormyrops_kingsleyae
ENSHCOG00000011588	-	87	30.055	ENSPSIG00000000095	-	79	30.055	Pelodiscus_sinensis
ENSHCOG00000011588	-	88	30.108	ENSPSIG00000000817	-	52	30.108	Pelodiscus_sinensis
ENSHCOG00000011588	-	88	30.108	ENSPSIG00000001144	-	54	30.108	Pelodiscus_sinensis
ENSHCOG00000011588	-	72	30.464	ENSPSIG00000001834	-	60	30.464	Pelodiscus_sinensis
ENSHCOG00000011588	-	69	31.250	ENSPSIG00000001954	-	53	31.250	Pelodiscus_sinensis
ENSHCOG00000011588	-	83	55.556	ENSSDUG00000021943	-	83	55.556	Seriola_dumerili
ENSHCOG00000011588	-	79	51.553	ENSSDUG00000004709	-	91	51.553	Seriola_dumerili